RNA–Protein interactions for RNA: ENST00000535283.5

DDB1-206, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-206ENST00000535283 UBR3Q6ZT12 1888 aa12.42□□□□□ -0.42
DDB1-206ENST00000535283 MVPQ14764 893 aaKnown RBP12.42□□□□□ -0.42
DDB1-206ENST00000535283 ZNF790Q6PG37 636 aa12.42□□□□□ -0.42
DDB1-206ENST00000535283 NFATC2IPQ8NCF5 419 aa12.42□□□□□ -0.42
DDB1-206ENST00000535283 FMNL2Q96PY5 1086 aa12.42□□□□□ -0.42
DDB1-206ENST00000535283 TMOD3Q9NYL9 352 aa12.42□□□□□ -0.42
DDB1-206ENST00000535283 RGPD2P0DJD1 1756 aa12.42□□□□□ -0.42
DDB1-206ENST00000535283 PKD1L3Q7Z443 1732 aa12.42□□□□□ -0.42
DDB1-206ENST00000535283 C4BP0C0L5 1744 aa12.41□□□□□ -0.42
DDB1-206ENST00000535283 TRIM27P14373 513 aa12.41□□□□□ -0.42
DDB1-206ENST00000535283 ITPRIPQ8IWB1 547 aa12.41□□□□□ -0.42
DDB1-206ENST00000535283 DBF4Q9UBU7 674 aaPredicted RBP12.41□□□□□ -0.42
DDB1-206ENST00000535283 KIF13BQ9NQT8 1826 aa12.41□□□□□ -0.42
DDB1-206ENST00000535283 SNRPA1P09661 255 aaKnown RBP12.4□□□□□ -0.42
DDB1-206ENST00000535283 TEX13AQ9BXU3 409 aaPredicted RBP12.4□□□□□ -0.42
DDB1-206ENST00000535283 KCPQ6ZWJ8 1503 aa12.4□□□□□ -0.42
DDB1-206ENST00000535283 PXDNLA1KZ92 1463 aa12.4□□□□□ -0.43
DDB1-206ENST00000535283 DDX58O95786 925 aaKnown RBP12.39□□□□□ -0.43
DDB1-206ENST00000535283 CCT4P50991 539 aaKnown RBP12.39□□□□□ -0.43
DDB1-206ENST00000535283 FSTL1Q12841 308 aa12.39□□□□□ -0.43
DDB1-206ENST00000535283 C20orf194Q5TEA3 1177 aa12.39□□□□□ -0.43
DDB1-206ENST00000535283 C16orf71Q8IYS4 520 aaPredicted RBP12.39□□□□□ -0.43
DDB1-206ENST00000535283 PANK1Q8TE04 598 aa12.39□□□□□ -0.43
DDB1-206ENST00000535283 CLUAP1Q96AJ1 413 aa12.39□□□□□ -0.43
DDB1-206ENST00000535283 HDAC5Q9UQL6 1122 aa12.39□□□□□ -0.43
DDB1-206ENST00000535283 COG6Q9Y2V7 657 aa12.39□□□□□ -0.43
DDB1-206ENST00000535283 DLG5Q8TDM6 1919 aa12.39□□□□□ -0.43
DDB1-206ENST00000535283 KDM6AO15550 1401 aaPredicted RBP12.38□□□□□ -0.43
DDB1-206ENST00000535283 BRCA1P38398 1863 aaKnown RBP12.38□□□□□ -0.43
DDB1-206ENST00000535283 PHF14O94880 888 aa12.38□□□□□ -0.43
DDB1-206ENST00000535283 EIF2S2P20042 333 aaKnown RBP12.38□□□□□ -0.43
DDB1-206ENST00000535283 HYPKQ9NX55 129 aa12.38□□□□□ -0.43
DDB1-206ENST00000535283 BCS1LQ9Y276 419 aa12.38□□□□□ -0.43
DDB1-206ENST00000535283 MRC1P22897 1456 aa12.38□□□□□ -0.43
DDB1-206ENST00000535283 ERBB4Q15303 1308 aa12.37□□□□□ -0.43
DDB1-206ENST00000535283 FKBP5Q13451 457 aaPredicted RBP12.37□□□□□ -0.43
DDB1-206ENST00000535283 B4GALNT3Q6L9W6 998 aa12.37□□□□□ -0.43
DDB1-206ENST00000535283 ARHGAP27Q6ZUM4 889 aa12.37□□□□□ -0.43
DDB1-206ENST00000535283 CENPQQ7L2Z9 268 aaPredicted RBP12.37□□□□□ -0.43
DDB1-206ENST00000535283 RWDD1Q9H446 243 aaPredicted RBP12.37□□□□□ -0.43
DDB1-206ENST00000535283 TNRC6CQ9HCJ0 1690 aaKnown RBP12.36□□□□□ -0.43
DDB1-206ENST00000535283 HMGB2P26583 209 aaKnown RBP12.36□□□□□ -0.43
DDB1-206ENST00000535283 FLIIQ13045 1269 aa12.36□□□□□ -0.43
DDB1-206ENST00000535283 KRT24Q2M2I5 525 aa12.36□□□□□ -0.43
DDB1-206ENST00000535283 VSIG10Q8N0Z9 540 aa12.36□□□□□ -0.43
DDB1-206ENST00000535283 FLAD1Q8NFF5 587 aa12.36□□□□□ -0.43
DDB1-206ENST00000535283 RRAGCQ9HB90 399 aa12.36□□□□□ -0.43
DDB1-206ENST00000535283 ABCC4O15439 1325 aa12.36□□□□□ -0.43
DDB1-206ENST00000535283 HEG1Q9ULI3 1381 aa12.35□□□□□ -0.43
DDB1-206ENST00000535283 A0A0G2JLW4 131 aa12.35□□□□□ -0.43
DDB1-206ENST00000535283 C9orf131Q5VYM1 1079 aa12.35□□□□□ -0.43
DDB1-206ENST00000535283 NPM2Q86SE8 214 aaKnown RBP12.35□□□□□ -0.43
DDB1-206ENST00000535283 ADAMTS7Q9UKP4 1686 aa12.35□□□□□ -0.43
DDB1-206ENST00000535283 PALLDQ8WX93 1383 aa12.34□□□□□ -0.43
DDB1-206ENST00000535283 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.34□□□□□ -0.43
DDB1-206ENST00000535283 TCERG1O14776 1098 aaKnown RBP12.34□□□□□ -0.43
DDB1-206ENST00000535283 STARD3NLO95772 234 aa12.34□□□□□ -0.43
DDB1-206ENST00000535283 INTS3Q68E01 1043 aaKnown RBP12.34□□□□□ -0.43
DDB1-206ENST00000535283 TMEM57Q8N5G2 664 aa12.34□□□□□ -0.43
DDB1-206ENST00000535283 SMARCC1Q92922 1105 aaPredicted RBP12.34□□□□□ -0.43
DDB1-206ENST00000535283 DDX21Q9NR30 783 aaKnown RBP eCLIP12.34□□□□□ -0.43
DDB1-206ENST00000535283 ARFGEF1Q9Y6D6 1849 aa12.34□□□□□ -0.43
DDB1-206ENST00000535283 ITGB4P16144 1822 aa12.33□□□□□ -0.44
DDB1-206ENST00000535283 KCNQ3O43525 872 aa12.33□□□□□ -0.44
DDB1-206ENST00000535283 SLC39A6Q13433 755 aa12.33□□□□□ -0.44
DDB1-206ENST00000535283 FAM161AQ3B820 660 aa12.33□□□□□ -0.44
DDB1-206ENST00000535283 NECTIN2Q92692 538 aa12.33□□□□□ -0.44
DDB1-206ENST00000535283 ZNF496Q96IT1 587 aaPredicted RBP12.33□□□□□ -0.44
DDB1-206ENST00000535283 AK7Q96M32 723 aa12.33□□□□□ -0.44
DDB1-206ENST00000535283 PCDH10Q9P2E7 1040 aa12.33□□□□□ -0.44
DDB1-206ENST00000535283 SBF1O95248 1867 aa12.33□□□□□ -0.44
DDB1-206ENST00000535283 C10orf71Q711Q0 1435 aa12.32□□□□□ -0.44
DDB1-206ENST00000535283 GNAI3P08754 354 aa12.32□□□□□ -0.44
DDB1-206ENST00000535283 RLBP1P12271 317 aa12.32□□□□□ -0.44
DDB1-206ENST00000535283 NEXNQ0ZGT2 675 aa12.32□□□□□ -0.44
DDB1-206ENST00000535283 POTEHQ6S545 545 aa12.32□□□□□ -0.44
DDB1-206ENST00000535283 CHPF2Q9P2E5 772 aa12.32□□□□□ -0.44
DDB1-206ENST00000535283 SLC4A10Q6U841 1118 aa12.31□□□□□ -0.44
DDB1-206ENST00000535283 SMC1BQ8NDV3 1235 aa12.31□□□□□ -0.44
DDB1-206ENST00000535283 HMMRO75330 724 aa12.3□□□□□ -0.44
DDB1-206ENST00000535283 MMP10P09238 476 aa12.3□□□□□ -0.44
DDB1-206ENST00000535283 DPEP1P16444 411 aa12.3□□□□□ -0.44
DDB1-206ENST00000535283 KSR2Q6VAB6 950 aa12.3□□□□□ -0.44
DDB1-206ENST00000535283 DNAAF4Q8WXU2 420 aa12.3□□□□□ -0.44
DDB1-206ENST00000535283 PIGBQ92521 554 aa12.3□□□□□ -0.44
DDB1-206ENST00000535283 SRCIN1Q9C0H9 1055 aa12.3□□□□□ -0.44
DDB1-206ENST00000535283 ZBTB40Q9NUA8 1239 aa12.3□□□□□ -0.44
DDB1-206ENST00000535283 ZBTB47Q9UFB7 747 aaPredicted RBP12.3□□□□□ -0.44
DDB1-206ENST00000535283 KDM2BQ8NHM5 1336 aa12.3□□□□□ -0.44
DDB1-206ENST00000535283 ZBTB7BO15156 539 aaPredicted RBP12.29□□□□□ -0.44
DDB1-206ENST00000535283 ALDH1L1O75891 902 aa12.29□□□□□ -0.44
DDB1-206ENST00000535283 TGFB2P61812 414 aa12.29□□□□□ -0.44
DDB1-206ENST00000535283 RPAP2Q8IXW5 612 aaPredicted RBP12.29□□□□□ -0.44
DDB1-206ENST00000535283 LINC00116Q8NCU8 138 aa12.29□□□□□ -0.44
DDB1-206ENST00000535283 RBM42Q9BTD8 480 aaKnown RBP12.29□□□□□ -0.44
DDB1-206ENST00000535283 RTN4Q9NQC3 1192 aaKnown RBP12.29□□□□□ -0.44
DDB1-206ENST00000535283 RNF181Q9P0P0 153 aa12.29□□□□□ -0.44
DDB1-206ENST00000535283 KDM3BQ7LBC6 1761 aa12.28□□□□□ -0.44
DDB1-206ENST00000535283 SCN11AQ9UI33 1791 aa12.28□□□□□ -0.44
DDB1-206ENST00000535283 FOXN1O15353 648 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms