RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 DDX19AQ9NUU7 478 aaKnown RBP14.08□□□□□ -0.16
AMBRA1-212ENST00000534300 KRT18P05783 430 aaKnown RBP14.07□□□□□ -0.16
AMBRA1-212ENST00000534300 LMAN1P49257 510 aa14.07□□□□□ -0.16
AMBRA1-212ENST00000534300 GTF2A1P52655 376 aaPredicted RBP14.07□□□□□ -0.16
AMBRA1-212ENST00000534300 YTHDC2Q9H6S0 1430 aaKnown RBP14.07□□□□□ -0.16
AMBRA1-212ENST00000534300 RNF187Q5TA31 235 aaPredicted RBP14.07□□□□□ -0.16
AMBRA1-212ENST00000534300 MPHOSPH8Q99549 860 aa14.07□□□□□ -0.16
AMBRA1-212ENST00000534300 TANGO6Q9C0B7 1094 aa14.07□□□□□ -0.16
AMBRA1-212ENST00000534300 SH2B1Q9NRF2 756 aaPredicted RBP14.07□□□□□ -0.16
AMBRA1-212ENST00000534300 BTG4Q9NY30 223 aa14.07□□□□□ -0.16
AMBRA1-212ENST00000534300 RFC4P35249 363 aa14.07□□□□□ -0.16
AMBRA1-212ENST00000534300 STK32BQ9NY57 414 aa14.07□□□□□ -0.16
AMBRA1-212ENST00000534300 TMEM94Q12767 1356 aa14.07□□□□□ -0.16
AMBRA1-212ENST00000534300 ADGRL2O95490 1459 aa14.07□□□□□ -0.16
AMBRA1-212ENST00000534300 BAG4O95429 457 aaKnown RBP14.07□□□□□ -0.16
AMBRA1-212ENST00000534300 CNNM1Q9NRU3 951 aa14.07□□□□□ -0.16
AMBRA1-212ENST00000534300 ERCC6L2Q5T890 1561 aa14.07□□□□□ -0.16
AMBRA1-212ENST00000534300 HECW2Q9P2P5 1572 aa14.06□□□□□ -0.16
AMBRA1-212ENST00000534300 KDM5DQ9BY66 1539 aa14.06□□□□□ -0.16
AMBRA1-212ENST00000534300 IVLP07476 585 aa14.06□□□□□ -0.16
AMBRA1-212ENST00000534300 FERMT3Q86UX7 667 aa14.06□□□□□ -0.16
AMBRA1-212ENST00000534300 TRMT1Q9NXH9 659 aaKnown RBP14.06□□□□□ -0.16
AMBRA1-212ENST00000534300 NFE2L2Q16236 605 aa14.06□□□□□ -0.16
AMBRA1-212ENST00000534300 ZNF397Q8NF99 534 aaPredicted RBP14.06□□□□□ -0.16
AMBRA1-212ENST00000534300 GCP02774 474 aa14.06□□□□□ -0.16
AMBRA1-212ENST00000534300 CABLES1Q8TDN4 633 aa14.06□□□□□ -0.16
AMBRA1-212ENST00000534300 PAFAH1B1P43034 410 aa14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 TICAM2Q86XR7 235 aa14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 SIRT1Q96EB6 747 aa14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 CTNNA3Q9UI47 895 aa14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 ARHGEF5Q12774 1597 aa14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 MAST1Q9Y2H9 1570 aa14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 SLC3A2P08195 630 aaKnown RBP14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 SPA17Q15506 151 aa14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 HS1BP3Q53T59 392 aa14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 LUZP1Q86V48 1076 aa14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 USHBP1Q8N6Y0 703 aa14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 DNMT1P26358 1616 aaKnown RBP14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 UGGT1Q9NYU2 1555 aa14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 GOLGA6L10A0A0M3HER8 536 aa14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 SNW1Q13573 536 aaKnown RBP14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 TRPC5Q9UL62 973 aaPredicted RBP14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 WDHD1O75717 1129 aaPredicted RBP14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 MYL6BP14649 208 aa14.05□□□□□ -0.16
AMBRA1-212ENST00000534300 LTKP29376 864 aa14.04□□□□□ -0.16
AMBRA1-212ENST00000534300 GBP2P32456 591 aaPredicted RBP14.04□□□□□ -0.16
AMBRA1-212ENST00000534300 NOLC1Q14978 699 aaKnown RBP eCLIP14.04□□□□□ -0.16
AMBRA1-212ENST00000534300 TAF7Q15545 349 aaPredicted RBP14.04□□□□□ -0.16
AMBRA1-212ENST00000534300 CEP135Q66GS9 1140 aa14.04□□□□□ -0.16
AMBRA1-212ENST00000534300 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.04□□□□□ -0.162e-6■■■■■ 28.2
AMBRA1-212ENST00000534300 ZKSCAN5Q9Y2L8 839 aa14.04□□□□□ -0.16
AMBRA1-212ENST00000534300 IBSPP21815 317 aaPredicted RBP14.04□□□□□ -0.16
AMBRA1-212ENST00000534300 CTR9Q6PD62 1173 aa14.04□□□□□ -0.16
AMBRA1-212ENST00000534300 ANKRD36BQ8N2N9 1353 aa14.04□□□□□ -0.16
AMBRA1-212ENST00000534300 CASTP20810 708 aaKnown RBP14.04□□□□□ -0.16
AMBRA1-212ENST00000534300 CCDC158Q5M9N0 1113 aa14.04□□□□□ -0.16
AMBRA1-212ENST00000534300 CCDC171Q6TFL3 1326 aa14.04□□□□□ -0.16
AMBRA1-212ENST00000534300 PLEKHG1Q9ULL1 1385 aa14.04□□□□□ -0.16
AMBRA1-212ENST00000534300 CCDC175P0C221 793 aa14.04□□□□□ -0.16
AMBRA1-212ENST00000534300 SMC1AQ14683 1233 aaKnown RBP14.04□□□□□ -0.16
AMBRA1-212ENST00000534300 EMILIN1Q9Y6C2 1016 aa14.04□□□□□ -0.16
AMBRA1-212ENST00000534300 CWC27Q6UX04 472 aaKnown RBP14.03□□□□□ -0.16
AMBRA1-212ENST00000534300 IGHMBP2P38935 993 aaKnown RBP14.03□□□□□ -0.16
AMBRA1-212ENST00000534300 WASF1Q92558 559 aa14.03□□□□□ -0.16
AMBRA1-212ENST00000534300 CCDC94Q9BW85 323 aaPredicted RBP14.03□□□□□ -0.16
AMBRA1-212ENST00000534300 BMP2KQ9NSY1 1161 aaPredicted RBP14.03□□□□□ -0.16
AMBRA1-212ENST00000534300 ARAP3Q8WWN8 1544 aa14.03□□□□□ -0.16
AMBRA1-212ENST00000534300 TBC1D32Q96NH3 1257 aa14.03□□□□□ -0.16
AMBRA1-212ENST00000534300 NACAP1Q9BZK3 213 aa14.03□□□□□ -0.16
AMBRA1-212ENST00000534300 EFCAB6Q5THR3 1501 aa14.03□□□□□ -0.16
AMBRA1-212ENST00000534300 LRSAM1Q6UWE0 723 aa14.03□□□□□ -0.16
AMBRA1-212ENST00000534300 TMEM57Q8N5G2 664 aa14.03□□□□□ -0.16
AMBRA1-212ENST00000534300 FYB1O15117 783 aa14.02□□□□□ -0.16
AMBRA1-212ENST00000534300 ORAI2Q96SN7 254 aa14.02□□□□□ -0.16
AMBRA1-212ENST00000534300 ZNF165P49910 485 aa14.02□□□□□ -0.16
AMBRA1-212ENST00000534300 IRX3P78415 501 aaPredicted RBP14.02□□□□□ -0.16
AMBRA1-212ENST00000534300 CCDC57Q2TAC2 916 aa14.02□□□□□ -0.16
AMBRA1-212ENST00000534300 CEP131Q9UPN4 1083 aa14.02□□□□□ -0.16
AMBRA1-212ENST00000534300 CCDC69A6NI79 296 aa14.02□□□□□ -0.17
AMBRA1-212ENST00000534300 CCDC91Q7Z6B0 441 aa14.02□□□□□ -0.17
AMBRA1-212ENST00000534300 RPGRQ92834 1020 aaKnown RBP14.02□□□□□ -0.17
AMBRA1-212ENST00000534300 ABCC1P33527 1531 aa14.02□□□□□ -0.17
AMBRA1-212ENST00000534300 CERKQ8TCT0 537 aa14.02□□□□□ -0.17
AMBRA1-212ENST00000534300 ARFGAP3Q9NP61 516 aa14.02□□□□□ -0.17
AMBRA1-212ENST00000534300 RXRBP28702 533 aa14.01□□□□□ -0.17
AMBRA1-212ENST00000534300 IFFO1Q0D2I5 559 aa14.01□□□□□ -0.17
AMBRA1-212ENST00000534300 TUBB4AP04350 444 aa14.01□□□□□ -0.17
AMBRA1-212ENST00000534300 ZSCAN23Q3MJ62 389 aa14.01□□□□□ -0.17
AMBRA1-212ENST00000534300 LIMCH1Q9UPQ0 1083 aa14.01□□□□□ -0.17
AMBRA1-212ENST00000534300 USO1O60763 962 aaKnown RBP14.01□□□□□ -0.17
AMBRA1-212ENST00000534300 CKAP2LQ8IYA6 745 aa14.01□□□□□ -0.17
AMBRA1-212ENST00000534300 SMAP1Q8IYB5 467 aaPredicted RBP14.01□□□□□ -0.17
AMBRA1-212ENST00000534300 TFCP2L1Q9NZI6 479 aa14.01□□□□□ -0.17
AMBRA1-212ENST00000534300 TMOD2Q9NZR1 351 aa14.01□□□□□ -0.17
AMBRA1-212ENST00000534300 PIK3R4Q99570 1358 aa14.01□□□□□ -0.17
AMBRA1-212ENST00000534300 NPATQ14207 1427 aa14□□□□□ -0.17
AMBRA1-212ENST00000534300 PTPRKQ15262 1439 aa14□□□□□ -0.17
AMBRA1-212ENST00000534300 UBE2HP62256 183 aa14□□□□□ -0.17
AMBRA1-212ENST00000534300 RAI14Q9P0K7 980 aa14□□□□□ -0.17
AMBRA1-212ENST00000534300 CCDC150Q8NCX0 1101 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms