RNA–Protein interactions for RNA: ENST00000534018.5

GSDMD-215, Transcript of gasdermin D, humanhuman

TSL 5

Gene GSDMD, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-215ENST00000534018 NUDCQ9Y266 331 aa22.1■■□□□ 1.13
GSDMD-215ENST00000534018 USP16Q9Y5T5 823 aa22.1■■□□□ 1.13
GSDMD-215ENST00000534018 U2AF1L5P0DN76 240 aaPredicted RBP22.09■■□□□ 1.13
GSDMD-215ENST00000534018 U2AF1Q01081 240 aaKnown RBP eCLIP22.09■■□□□ 1.13
GSDMD-215ENST00000534018 MCM10Q7L590 875 aa22.09■■□□□ 1.13
GSDMD-215ENST00000534018 ST5P78524 1137 aa22.08■■□□□ 1.13
GSDMD-215ENST00000534018 RTF1Q92541 710 aaKnown RBP22.08■■□□□ 1.13
GSDMD-215ENST00000534018 PCNTO95613 3336 aa22.07■■□□□ 1.12
GSDMD-215ENST00000534018 PPP2R1AP30153 589 aa22.07■■□□□ 1.12
GSDMD-215ENST00000534018 DCTN1Q14203 1278 aa22.06■■□□□ 1.12
GSDMD-215ENST00000534018 ERFEQ4G0M1 354 aa22.06■■□□□ 1.12
GSDMD-215ENST00000534018 JMYQ8N9B5 988 aa22.06■■□□□ 1.12
GSDMD-215ENST00000534018 KDM3BQ7LBC6 1761 aa22.06■■□□□ 1.12
GSDMD-215ENST00000534018 DPY19L2Q6NUT2 758 aa22.05■■□□□ 1.12
GSDMD-215ENST00000534018 PRPF40BQ6NWY9 871 aaKnown RBP22.05■■□□□ 1.12
GSDMD-215ENST00000534018 TAOK3Q9H2K8 898 aa22.05■■□□□ 1.12
GSDMD-215ENST00000534018 POTECB2RU33 542 aa22.04■■□□□ 1.12
GSDMD-215ENST00000534018 SNRPA1P09661 255 aaKnown RBP22.04■■□□□ 1.12
GSDMD-215ENST00000534018 SRGNP10124 158 aa22.04■■□□□ 1.12
GSDMD-215ENST00000534018 STYK1Q6J9G0 422 aa22.04■■□□□ 1.12
GSDMD-215ENST00000534018 CNKSR1Q969H4 720 aa22.04■■□□□ 1.12
GSDMD-215ENST00000534018 NBPF5PQ86XG9 351 aaPredicted RBP22.03■■□□□ 1.12
GSDMD-215ENST00000534018 MASTLQ96GX5 879 aa22.03■■□□□ 1.12
GSDMD-215ENST00000534018 NUP98P52948 1817 aa22.03■■□□□ 1.12
GSDMD-215ENST00000534018 LTBP3Q9NS15 1303 aa22.03■■□□□ 1.12
GSDMD-215ENST00000534018 ZNF652Q9Y2D9 606 aa22.02■■□□□ 1.12
GSDMD-215ENST00000534018 CLEC4GQ6UXB4 293 aa22.01■■□□□ 1.11
GSDMD-215ENST00000534018 NBPF26B4DH59 902 aa22■■□□□ 1.11
GSDMD-215ENST00000534018 NBPF10Q6P3W6 841 aaKnown RBP22■■□□□ 1.11
GSDMD-215ENST00000534018 NBPF15Q8N660 670 aa22■■□□□ 1.11
GSDMD-215ENST00000534018 SCN4AP35499 1836 aa22■■□□□ 1.11
GSDMD-215ENST00000534018 SOGA3Q5TF21 947 aa21.99■■□□□ 1.11
GSDMD-215ENST00000534018 FAM177BA6PVY3 158 aa21.98■■□□□ 1.11
GSDMD-215ENST00000534018 DDNO94850 711 aaPredicted RBP21.98■■□□□ 1.11
GSDMD-215ENST00000534018 MIS18AQ9NYP9 233 aa21.98■■□□□ 1.11
GSDMD-215ENST00000534018 NIP7Q9Y221 180 aaKnown RBP eCLIP21.98■■□□□ 1.11
GSDMD-215ENST00000534018 HTATSF1O43719 755 aaKnown RBP21.97■■□□□ 1.11
GSDMD-215ENST00000534018 COL13A1Q5TAT6 717 aaPredicted RBP21.97■■□□□ 1.11
GSDMD-215ENST00000534018 NPR1P16066 1061 aa21.95■■□□□ 1.1
GSDMD-215ENST00000534018 TAF7Q15545 349 aaPredicted RBP21.95■■□□□ 1.1
GSDMD-215ENST00000534018 CCDC93Q567U6 631 aa21.95■■□□□ 1.1
GSDMD-215ENST00000534018 TPTE2Q6XPS3 522 aa21.95■■□□□ 1.1
GSDMD-215ENST00000534018 POTEIP0CG38 1075 aa21.94■■□□□ 1.1
GSDMD-215ENST00000534018 POTEJP0CG39 1038 aa21.94■■□□□ 1.1
GSDMD-215ENST00000534018 HLFQ16534 295 aa21.94■■□□□ 1.1
GSDMD-215ENST00000534018 OLFM4Q6UX06 510 aa21.94■■□□□ 1.1
GSDMD-215ENST00000534018 C7orf43Q8WVR3 580 aa21.94■■□□□ 1.1
GSDMD-215ENST00000534018 CHADLQ6NUI6 762 aa21.93■■□□□ 1.1
GSDMD-215ENST00000534018 KLRG2A4D1S0 409 aaPredicted RBP21.92■■□□□ 1.1
GSDMD-215ENST00000534018 RGL2O15211 777 aa21.92■■□□□ 1.1
GSDMD-215ENST00000534018 NEFMP07197 916 aa21.92■■□□□ 1.1
GSDMD-215ENST00000534018 NGEFQ8N5V2 710 aa21.92■■□□□ 1.1
GSDMD-215ENST00000534018 FKBP4Q02790 459 aaKnown RBP eCLIP21.91■■□□□ 1.1
GSDMD-215ENST00000534018 ZNF277Q9NRM2 450 aaPredicted RBP21.91■■□□□ 1.1
GSDMD-215ENST00000534018 ABCC12Q96J65 1359 aa21.9■■□□□ 1.1
GSDMD-215ENST00000534018 ZNF541Q9H0D2 1346 aa21.9■■□□□ 1.1
GSDMD-215ENST00000534018 HSPA1AP0DMV8 641 aaKnown RBP21.9■■□□□ 1.1
GSDMD-215ENST00000534018 HSPA1BP0DMV9 641 aaKnown RBP21.9■■□□□ 1.1
GSDMD-215ENST00000534018 GTF2E1P29083 439 aaPredicted RBP21.9■■□□□ 1.1
GSDMD-215ENST00000534018 IQCA1LA6NCM1 817 aa21.89■■□□□ 1.09
GSDMD-215ENST00000534018 THUMPD2Q9BTF0 503 aaKnown RBP21.89■■□□□ 1.09
GSDMD-215ENST00000534018 ADAMTSL1Q8N6G6 1762 aa21.89■■□□□ 1.09
GSDMD-215ENST00000534018 NUTM1Q86Y26 1132 aa21.88■■□□□ 1.09
GSDMD-215ENST00000534018 PNISRQ8TF01 805 aaKnown RBP21.88■■□□□ 1.09
GSDMD-215ENST00000534018 L3MBTL3Q96JM7 780 aaPredicted RBP21.88■■□□□ 1.09
GSDMD-215ENST00000534018 RTKN2Q8IZC4 609 aa21.87■■□□□ 1.09
GSDMD-215ENST00000534018 PLEKHF1Q96S99 279 aa21.87■■□□□ 1.09
GSDMD-215ENST00000534018 CREBZFQ9NS37 354 aa21.87■■□□□ 1.09
GSDMD-215ENST00000534018 MKRN1Q9UHC7 482 aaKnown RBP21.87■■□□□ 1.09
GSDMD-215ENST00000534018 RRP7AQ9Y3A4 280 aaKnown RBP21.87■■□□□ 1.09
GSDMD-215ENST00000534018 MAP3K15Q6ZN16 1313 aa21.86■■□□□ 1.09
GSDMD-215ENST00000534018 MYL6BP14649 208 aa21.86■■□□□ 1.09
GSDMD-215ENST00000534018 ALDH1B1P30837 517 aa21.86■■□□□ 1.09
GSDMD-215ENST00000534018 EIF4A1P60842 406 aaKnown RBP21.86■■□□□ 1.09
GSDMD-215ENST00000534018 KIF6Q6ZMV9 814 aa21.86■■□□□ 1.09
GSDMD-215ENST00000534018 TTLL7Q6ZT98 887 aa21.86■■□□□ 1.09
GSDMD-215ENST00000534018 TNS4Q8IZW8 715 aa21.86■■□□□ 1.09
GSDMD-215ENST00000534018 NYXQ9GZU5 481 aa21.86■■□□□ 1.09
GSDMD-215ENST00000534018 TAF1DQ9H5J8 278 aaPredicted RBP21.86■■□□□ 1.09
GSDMD-215ENST00000534018 ANKRD36CQ5JPF3 1778 aa21.85■■□□□ 1.09
GSDMD-215ENST00000534018 CAPN15O75808 1086 aa21.85■■□□□ 1.09
GSDMD-215ENST00000534018 NFE2L2Q16236 605 aa21.85■■□□□ 1.09
GSDMD-215ENST00000534018 LDHDQ86WU2 507 aa21.85■■□□□ 1.09
GSDMD-215ENST00000534018 SNED1Q8TER0 1413 aa21.85■■□□□ 1.09
GSDMD-215ENST00000534018 ERVV-1B6SEH8 477 aa21.84■■□□□ 1.09
GSDMD-215ENST00000534018 IARSP41252 1262 aaKnown RBP21.84■■□□□ 1.09
GSDMD-215ENST00000534018 EAPPQ56P03 285 aaPredicted RBP21.84■■□□□ 1.09
GSDMD-215ENST00000534018 ZBTB3Q9H5J0 574 aa21.84■■□□□ 1.09
GSDMD-215ENST00000534018 UBN2Q6ZU65 1347 aa21.83■■□□□ 1.09
GSDMD-215ENST00000534018 MAPK8IP3Q9UPT6 1336 aa21.83■■□□□ 1.09
GSDMD-215ENST00000534018 COL4A5P29400 1685 aa21.83■■□□□ 1.09
GSDMD-215ENST00000534018 GPTP24298 496 aa21.83■■□□□ 1.09
GSDMD-215ENST00000534018 CRY2Q49AN0 593 aa21.83■■□□□ 1.09
GSDMD-215ENST00000534018 SYNE4Q8N205 404 aa21.83■■□□□ 1.09
GSDMD-215ENST00000534018 LAMB2P55268 1798 aa21.83■■□□□ 1.09
GSDMD-215ENST00000534018 RNF123Q5XPI4 1314 aa21.82■■□□□ 1.08
GSDMD-215ENST00000534018 PASKQ96RG2 1323 aa21.82■■□□□ 1.08
GSDMD-215ENST00000534018 HACL1Q9UJ83 578 aa21.82■■□□□ 1.08
GSDMD-215ENST00000534018 RIC1Q4ADV7 1423 aa21.81■■□□□ 1.08
GSDMD-215ENST00000534018 LTBP1Q14766 1721 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms