RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 DAXXQ9UER7 740 aaPredicted RBP12.09□□□□□ -0.47
CHKA-207ENST00000533728 TSPYL4Q9UJ04 414 aa12.09□□□□□ -0.47
CHKA-207ENST00000533728 SCN11AQ9UI33 1791 aa12.09□□□□□ -0.47
CHKA-207ENST00000533728 VEGFBP49765 207 aa12.08□□□□□ -0.48
CHKA-207ENST00000533728 COL23A1Q86Y22 540 aaPredicted RBP12.08□□□□□ -0.48
CHKA-207ENST00000533728 MCOLN1Q9GZU1 580 aa12.08□□□□□ -0.48
CHKA-207ENST00000533728 ELL2O00472 640 aaPredicted RBP12.07□□□□□ -0.48
CHKA-207ENST00000533728 HOXB7P09629 217 aa12.07□□□□□ -0.48
CHKA-207ENST00000533728 CCT4P50991 539 aaKnown RBP12.07□□□□□ -0.48
CHKA-207ENST00000533728 BECN1Q14457 450 aa12.07□□□□□ -0.48
CHKA-207ENST00000533728 TAF7Q15545 349 aaPredicted RBP12.07□□□□□ -0.48
CHKA-207ENST00000533728 TBC1D32Q96NH3 1257 aa12.07□□□□□ -0.48
CHKA-207ENST00000533728 CDCA7Q9BWT1 371 aaPredicted RBP12.07□□□□□ -0.48
CHKA-207ENST00000533728 SOX12O15370 315 aa12.06□□□□□ -0.48
CHKA-207ENST00000533728 AMOTQ4VCS5 1084 aa12.06□□□□□ -0.48
CHKA-207ENST00000533728 BMP2KLQ5H9B9 411 aa12.06□□□□□ -0.48
CHKA-207ENST00000533728 CCDC30Q5VVM6 783 aa12.06□□□□□ -0.48
CHKA-207ENST00000533728 ANKRD44Q8N8A2 993 aa12.06□□□□□ -0.48
CHKA-207ENST00000533728 BCS1LQ9Y276 419 aa12.06□□□□□ -0.48
CHKA-207ENST00000533728 AXIN2Q9Y2T1 843 aa12.06□□□□□ -0.48
CHKA-207ENST00000533728 WDR17Q8IZU2 1322 aa12.06□□□□□ -0.48
CHKA-207ENST00000533728 CASP8AP2Q9UKL3 1982 aa12.05□□□□□ -0.48
CHKA-207ENST00000533728 SLC17A8Q8NDX2 589 aa12.05□□□□□ -0.48
CHKA-207ENST00000533728 STK31Q9BXU1 1019 aa12.05□□□□□ -0.48
CHKA-207ENST00000533728 DCTPP1Q9H773 170 aa12.05□□□□□ -0.48
CHKA-207ENST00000533728 ERBB3P21860 1342 aa12.05□□□□□ -0.48
CHKA-207ENST00000533728 SZT2Q5T011 3432 aa12.05□□□□□ -0.48
CHKA-207ENST00000533728 VEGFAP15692 232 aaPredicted RBP12.04□□□□□ -0.48
CHKA-207ENST00000533728 SIRT2Q8IXJ6 389 aa12.04□□□□□ -0.48
CHKA-207ENST00000533728 IL17REQ8NFR9 667 aa12.04□□□□□ -0.48
CHKA-207ENST00000533728 HMMRO75330 724 aa12.03□□□□□ -0.48
CHKA-207ENST00000533728 SLC4A2P04920 1241 aa12.03□□□□□ -0.48
CHKA-207ENST00000533728 SOX10P56693 466 aa12.03□□□□□ -0.48
CHKA-207ENST00000533728 MAP2K1Q02750 393 aaPredicted RBP12.03□□□□□ -0.48
CHKA-207ENST00000533728 PLEKHO1Q53GL0 409 aaPredicted RBP12.03□□□□□ -0.48
CHKA-207ENST00000533728 TOM1L2Q6ZVM7 507 aa12.03□□□□□ -0.48
CHKA-207ENST00000533728 SBF1O95248 1867 aa12.03□□□□□ -0.48
CHKA-207ENST00000533728 EXOC5O00471 708 aa12.02□□□□□ -0.49
CHKA-207ENST00000533728 SEC24BO95487 1268 aa12.02□□□□□ -0.49
CHKA-207ENST00000533728 KCNQ4P56696 695 aa12.02□□□□□ -0.49
CHKA-207ENST00000533728 RTL5Q5HYW3 569 aaPredicted RBP12.02□□□□□ -0.49
CHKA-207ENST00000533728 AKAP4Q5JQC9 854 aa12.02□□□□□ -0.49
CHKA-207ENST00000533728 MPNDQ8N594 471 aa12.02□□□□□ -0.49
CHKA-207ENST00000533728 CARD10Q9BWT7 1032 aa12.02□□□□□ -0.49
CHKA-207ENST00000533728 RNF181Q9P0P0 153 aa12.02□□□□□ -0.49
CHKA-207ENST00000533728 AK9Q5TCS8 1911 aa12.01□□□□□ -0.49
CHKA-207ENST00000533728 FXR1P51114 621 aaKnown RBP eCLIP12.01□□□□□ -0.49
CHKA-207ENST00000533728 KRT24Q2M2I5 525 aa12.01□□□□□ -0.49
CHKA-207ENST00000533728 ANKRD45Q5TZF3 282 aa12.01□□□□□ -0.49
CHKA-207ENST00000533728 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
CHKA-207ENST00000533728 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
CHKA-207ENST00000533728 LNPKQ9C0E8 428 aa12.01□□□□□ -0.49
CHKA-207ENST00000533728 ARFGEF1Q9Y6D6 1849 aa12□□□□□ -0.49
CHKA-207ENST00000533728 GNAI3P08754 354 aa12□□□□□ -0.49
CHKA-207ENST00000533728 RBM25P49756 843 aaKnown RBP12□□□□□ -0.49
CHKA-207ENST00000533728 CEP85Q6P2H3 762 aa12□□□□□ -0.49
CHKA-207ENST00000533728 IBTKQ9P2D0 1353 aaPredicted RBP12□□□□□ -0.49
CHKA-207ENST00000533728 KIAA1551Q9HCM1 1747 aa12□□□□□ -0.49
CHKA-207ENST00000533728 TRIOBPQ9H2D6 2365 aa11.99□□□□□ -0.49
CHKA-207ENST00000533728 C22orf23Q9BZE7 217 aa11.99□□□□□ -0.49
CHKA-207ENST00000533728 COL6A3P12111 3177 aa11.99□□□□□ -0.49
CHKA-207ENST00000533728 BRCA1P38398 1863 aaKnown RBP11.98□□□□□ -0.49
CHKA-207ENST00000533728 LY75O60449 1722 aa11.98□□□□□ -0.49
CHKA-207ENST00000533728 HEG1Q9ULI3 1381 aa11.98□□□□□ -0.49
CHKA-207ENST00000533728 FLIIQ13045 1269 aa11.98□□□□□ -0.49
CHKA-207ENST00000533728 ANKRD24Q8TF21 1146 aa11.98□□□□□ -0.49
CHKA-207ENST00000533728 LTV1Q96GA3 475 aaPredicted RBP11.98□□□□□ -0.49
CHKA-207ENST00000533728 C1orf115Q9H7X2 142 aa11.98□□□□□ -0.49
CHKA-207ENST00000533728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.98□□□□□ -0.496e-9■□□□□ 8.8
CHKA-207ENST00000533728 ZNF219Q9P2Y4 722 aaPredicted RBP11.98□□□□□ -0.49
CHKA-207ENST00000533728 KIF13BQ9NQT8 1826 aa11.97□□□□□ -0.49
CHKA-207ENST00000533728 LAMB4A4D0S4 1761 aa11.97□□□□□ -0.49
CHKA-207ENST00000533728 GNAI2P04899 355 aa11.97□□□□□ -0.49
CHKA-207ENST00000533728 EIF4A1P60842 406 aaKnown RBP11.97□□□□□ -0.49
CHKA-207ENST00000533728 DGKZQ13574 1117 aa11.97□□□□□ -0.49
CHKA-207ENST00000533728 BEGAINQ9BUH8 593 aa11.97□□□□□ -0.49
CHKA-207ENST00000533728 MIS18AQ9NYP9 233 aa11.97□□□□□ -0.49
CHKA-207ENST00000533728 MRC1P22897 1456 aa11.96□□□□□ -0.49
CHKA-207ENST00000533728 CDC45O75419 566 aa11.96□□□□□ -0.49
CHKA-207ENST00000533728 ZNF530Q6P9A1 599 aaPredicted RBP11.96□□□□□ -0.49
CHKA-207ENST00000533728 G2E3Q7L622 706 aa11.96□□□□□ -0.49
CHKA-207ENST00000533728 PLEKHM2Q8IWE5 1019 aa11.96□□□□□ -0.49
CHKA-207ENST00000533728 NBPF15Q8N660 670 aa11.96□□□□□ -0.49
CHKA-207ENST00000533728 SNX21Q969T3 373 aa11.96□□□□□ -0.49
CHKA-207ENST00000533728 MEIS3Q99687 375 aa11.96□□□□□ -0.49
CHKA-207ENST00000533728 OSBPL3Q9H4L5 887 aa11.96□□□□□ -0.49
CHKA-207ENST00000533728 RNMTO43148 476 aaKnown RBP11.95□□□□□ -0.5
CHKA-207ENST00000533728 TEFQ10587 303 aa11.95□□□□□ -0.5
CHKA-207ENST00000533728 C1orf141Q5JVX7 400 aa11.95□□□□□ -0.5
CHKA-207ENST00000533728 TTC22Q5TAA0 569 aa11.95□□□□□ -0.5
CHKA-207ENST00000533728 C5P01031 1676 aa11.94□□□□□ -0.5
CHKA-207ENST00000533728 ZBTB7CA1YPR0 619 aa11.94□□□□□ -0.5
CHKA-207ENST00000533728 ATP8B2P98198 1209 aa11.94□□□□□ -0.5
CHKA-207ENST00000533728 FKBP5Q13451 457 aaPredicted RBP11.94□□□□□ -0.5
CHKA-207ENST00000533728 HDGFL1Q5TGJ6 251 aa11.94□□□□□ -0.5
CHKA-207ENST00000533728 CHADLQ6NUI6 762 aa11.94□□□□□ -0.5
CHKA-207ENST00000533728 HDAC5Q9UQL6 1122 aa11.94□□□□□ -0.5
CHKA-207ENST00000533728 CACNA1AO00555 2505 aa11.94□□□□□ -0.5
CHKA-207ENST00000533728 ITGB4P16144 1822 aa11.93□□□□□ -0.5
CHKA-207ENST00000533728 AOX1Q06278 1338 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms