RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 H0YIN7 160 aa12.41□□□□□ -0.42
VPS26B-207ENST00000532160 A1BGP04217 495 aa12.41□□□□□ -0.42
VPS26B-207ENST00000532160 PRKAR2BP31323 418 aa12.41□□□□□ -0.42
VPS26B-207ENST00000532160 FSTL1Q12841 308 aa12.41□□□□□ -0.42
VPS26B-207ENST00000532160 FER1L6Q2WGJ9 1857 aa12.41□□□□□ -0.42
VPS26B-207ENST00000532160 PRR5LQ6MZQ0 368 aa12.41□□□□□ -0.42
VPS26B-207ENST00000532160 FMNL2Q96PY5 1086 aa12.41□□□□□ -0.42
VPS26B-207ENST00000532160 CAMTA2O94983 1202 aa12.4□□□□□ -0.42
VPS26B-207ENST00000532160 IL6STP40189 918 aaPredicted RBP12.4□□□□□ -0.42
VPS26B-207ENST00000532160 PIP4K2AP48426 406 aaPredicted RBP12.4□□□□□ -0.42
VPS26B-207ENST00000532160 WDR43Q15061 677 aaKnown RBP eCLIP12.4□□□□□ -0.42
VPS26B-207ENST00000532160 ZNF622Q969S3 477 aaKnown RBP eCLIP12.4□□□□□ -0.42
VPS26B-207ENST00000532160 TEX13AQ9BXU3 409 aaPredicted RBP12.4□□□□□ -0.42
VPS26B-207ENST00000532160 ZNF219Q9P2Y4 722 aaPredicted RBP12.4□□□□□ -0.42
VPS26B-207ENST00000532160 DICER1Q9UPY3 1922 aaKnown RBP12.4□□□□□ -0.42
VPS26B-207ENST00000532160 SLX4Q8IY92 1834 aa12.39□□□□□ -0.43
VPS26B-207ENST00000532160 PRAMEF22A3QJZ6 481 aa12.39□□□□□ -0.43
VPS26B-207ENST00000532160 GLTPD2A6NH11 291 aa12.39□□□□□ -0.43
VPS26B-207ENST00000532160 BTBD11A6QL63 1104 aa12.39□□□□□ -0.43
VPS26B-207ENST00000532160 FAM9BQ8IZU0 186 aa12.39□□□□□ -0.43
VPS26B-207ENST00000532160 KLRG1Q96E93 195 aa12.39□□□□□ -0.43
VPS26B-207ENST00000532160 BRIP1Q9BX63 1249 aa12.39□□□□□ -0.43
VPS26B-207ENST00000532160 ADAMTS8Q9UP79 889 aa12.39□□□□□ -0.43
VPS26B-207ENST00000532160 CCER2I3L3R5 266 aa12.38□□□□□ -0.43
VPS26B-207ENST00000532160 C21orf2O43822 256 aa12.38□□□□□ -0.43
VPS26B-207ENST00000532160 MCM10Q7L590 875 aa12.38□□□□□ -0.43
VPS26B-207ENST00000532160 CCDC146Q8IYE0 955 aa12.38□□□□□ -0.43
VPS26B-207ENST00000532160 SMC1BQ8NDV3 1235 aa12.38□□□□□ -0.43
VPS26B-207ENST00000532160 PNISRQ8TF01 805 aaKnown RBP12.38□□□□□ -0.43
VPS26B-207ENST00000532160 USP16Q9Y5T5 823 aa12.38□□□□□ -0.43
VPS26B-207ENST00000532160 PDE6BP35913 854 aa12.37□□□□□ -0.43
VPS26B-207ENST00000532160 CNBD1Q8NA66 436 aa12.37□□□□□ -0.43
VPS26B-207ENST00000532160 SETDB2Q96T68 719 aa12.37□□□□□ -0.43
VPS26B-207ENST00000532160 ARFGEF2Q9Y6D5 1785 aa12.37□□□□□ -0.43
VPS26B-207ENST00000532160 POTECB2RU33 542 aa12.36□□□□□ -0.43
VPS26B-207ENST00000532160 VEGFAP15692 232 aaPredicted RBP12.36□□□□□ -0.43
VPS26B-207ENST00000532160 DCTN1Q14203 1278 aa12.36□□□□□ -0.43
VPS26B-207ENST00000532160 DZIP3Q86Y13 1208 aaKnown RBP12.36□□□□□ -0.43
VPS26B-207ENST00000532160 JMYQ8N9B5 988 aa12.36□□□□□ -0.43
VPS26B-207ENST00000532160 PDZRN3Q9UPQ7 1066 aa12.36□□□□□ -0.43
VPS26B-207ENST00000532160 NPM2Q86SE8 214 aaKnown RBP12.35□□□□□ -0.43
VPS26B-207ENST00000532160 NPHP1O15259 732 aa12.34□□□□□ -0.43
VPS26B-207ENST00000532160 SRGNP10124 158 aa12.34□□□□□ -0.43
VPS26B-207ENST00000532160 ST5P78524 1137 aa12.34□□□□□ -0.43
VPS26B-207ENST00000532160 ERFEQ4G0M1 354 aa12.34□□□□□ -0.43
VPS26B-207ENST00000532160 STYK1Q6J9G0 422 aa12.34□□□□□ -0.43
VPS26B-207ENST00000532160 PRPF40BQ6NWY9 871 aaKnown RBP12.34□□□□□ -0.43
VPS26B-207ENST00000532160 RTF1Q92541 710 aaKnown RBP12.34□□□□□ -0.43
VPS26B-207ENST00000532160 LTBP3Q9NS15 1303 aa12.34□□□□□ -0.43
VPS26B-207ENST00000532160 DLG5Q8TDM6 1919 aa12.33□□□□□ -0.44
VPS26B-207ENST00000532160 NBPF26B4DH59 902 aa12.33□□□□□ -0.44
VPS26B-207ENST00000532160 SNRPA1P09661 255 aaKnown RBP12.33□□□□□ -0.44
VPS26B-207ENST00000532160 NBPF10Q6P3W6 841 aaKnown RBP12.33□□□□□ -0.44
VPS26B-207ENST00000532160 NBPF5PQ86XG9 351 aaPredicted RBP12.33□□□□□ -0.44
VPS26B-207ENST00000532160 NBPF15Q8N660 670 aa12.33□□□□□ -0.44
VPS26B-207ENST00000532160 CNKSR1Q969H4 720 aa12.33□□□□□ -0.44
VPS26B-207ENST00000532160 MASTLQ96GX5 879 aa12.33□□□□□ -0.44
VPS26B-207ENST00000532160 PLEKHF1Q96S99 279 aa12.33□□□□□ -0.44
VPS26B-207ENST00000532160 TAOK3Q9H2K8 898 aa12.33□□□□□ -0.44
VPS26B-207ENST00000532160 LAMB4A4D0S4 1761 aa12.33□□□□□ -0.44
VPS26B-207ENST00000532160 CLEC4GQ6UXB4 293 aa12.32□□□□□ -0.44
VPS26B-207ENST00000532160 RRP7AQ9Y3A4 280 aaKnown RBP12.32□□□□□ -0.44
VPS26B-207ENST00000532160 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
VPS26B-207ENST00000532160 POTEJP0CG39 1038 aa12.31□□□□□ -0.44
VPS26B-207ENST00000532160 COL13A1Q5TAT6 717 aaPredicted RBP12.31□□□□□ -0.44
VPS26B-207ENST00000532160 DPY19L2Q6NUT2 758 aa12.31□□□□□ -0.44
VPS26B-207ENST00000532160 C7orf43Q8WVR3 580 aa12.31□□□□□ -0.44
VPS26B-207ENST00000532160 MIS18AQ9NYP9 233 aa12.31□□□□□ -0.44
VPS26B-207ENST00000532160 ZNF652Q9Y2D9 606 aa12.31□□□□□ -0.44
VPS26B-207ENST00000532160 MAPK8IP3Q9UPT6 1336 aa12.31□□□□□ -0.44
VPS26B-207ENST00000532160 KDM3BQ7LBC6 1761 aa12.3□□□□□ -0.44
VPS26B-207ENST00000532160 FAM177BA6PVY3 158 aa12.3□□□□□ -0.44
VPS26B-207ENST00000532160 DDNO94850 711 aaPredicted RBP12.3□□□□□ -0.44
VPS26B-207ENST00000532160 NEUROD2Q15784 382 aa12.3□□□□□ -0.44
VPS26B-207ENST00000532160 HLFQ16534 295 aa12.3□□□□□ -0.44
VPS26B-207ENST00000532160 OLFM4Q6UX06 510 aa12.3□□□□□ -0.44
VPS26B-207ENST00000532160 RUNDC1Q96C34 613 aa12.3□□□□□ -0.44
VPS26B-207ENST00000532160 NIP7Q9Y221 180 aaKnown RBP eCLIP12.3□□□□□ -0.44
VPS26B-207ENST00000532160 KLRG2A4D1S0 409 aaPredicted RBP12.29□□□□□ -0.44
VPS26B-207ENST00000532160 APAF1O14727 1248 aa12.29□□□□□ -0.44
VPS26B-207ENST00000532160 HTATSF1O43719 755 aaKnown RBP12.29□□□□□ -0.44
VPS26B-207ENST00000532160 NEFMP07197 916 aa12.29□□□□□ -0.44
VPS26B-207ENST00000532160 NPR1P16066 1061 aa12.29□□□□□ -0.44
VPS26B-207ENST00000532160 TAF7Q15545 349 aaPredicted RBP12.29□□□□□ -0.44
VPS26B-207ENST00000532160 SOGA3Q5TF21 947 aa12.29□□□□□ -0.44
VPS26B-207ENST00000532160 PNNQ9H307 717 aaKnown RBP12.29□□□□□ -0.44
VPS26B-207ENST00000532160 SPINK5Q9NQ38 1064 aaPredicted RBP12.29□□□□□ -0.44
VPS26B-207ENST00000532160 SALL2Q9Y467 1007 aaPredicted RBP12.29□□□□□ -0.44
VPS26B-207ENST00000532160 NUP98P52948 1817 aa12.29□□□□□ -0.44
VPS26B-207ENST00000532160 CCDC93Q567U6 631 aa12.28□□□□□ -0.44
VPS26B-207ENST00000532160 GTF3C3Q9Y5Q9 886 aa12.28□□□□□ -0.44
VPS26B-207ENST00000532160 ABCC12Q96J65 1359 aa12.28□□□□□ -0.44
VPS26B-207ENST00000532160 SCN4AP35499 1836 aa12.27□□□□□ -0.44
VPS26B-207ENST00000532160 TMPOP42166 694 aaKnown RBP12.27□□□□□ -0.45
VPS26B-207ENST00000532160 NFE2L2Q16236 605 aa12.27□□□□□ -0.45
VPS26B-207ENST00000532160 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
VPS26B-207ENST00000532160 TPTE2Q6XPS3 522 aa12.27□□□□□ -0.45
VPS26B-207ENST00000532160 NGEFQ8N5V2 710 aa12.27□□□□□ -0.45
VPS26B-207ENST00000532160 THUMPD2Q9BTF0 503 aaKnown RBP12.27□□□□□ -0.45
VPS26B-207ENST00000532160 ZNF277Q9NRM2 450 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms