RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 C16orf71Q8IYS4 520 aaPredicted RBP17.63■□□□□ 0.41
AMBRA1-210ENST00000531542 ZNF622Q969S3 477 aaKnown RBP eCLIP17.63■□□□□ 0.41
AMBRA1-210ENST00000531542 MASTLQ96GX5 879 aa17.63■□□□□ 0.41
AMBRA1-210ENST00000531542 SBF1O95248 1867 aa17.63■□□□□ 0.41
AMBRA1-210ENST00000531542 BCORQ6W2J9 1755 aa17.62■□□□□ 0.41
AMBRA1-210ENST00000531542 PIP4K2AP48426 406 aaPredicted RBP17.62■□□□□ 0.41
AMBRA1-210ENST00000531542 EIF4A1P60842 406 aaKnown RBP17.62■□□□□ 0.41
AMBRA1-210ENST00000531542 SOGA3Q5TF21 947 aa17.62■□□□□ 0.41
AMBRA1-210ENST00000531542 NBPF5PQ86XG9 351 aaPredicted RBP17.62■□□□□ 0.41
AMBRA1-210ENST00000531542 MIS18AQ9NYP9 233 aa17.62■□□□□ 0.41
AMBRA1-210ENST00000531542 ANKRD31Q8N7Z5 1873 aa17.61■□□□□ 0.41
AMBRA1-210ENST00000531542 ERVV-1B6SEH8 477 aa17.61■□□□□ 0.41
AMBRA1-210ENST00000531542 NPHP1O15259 732 aa17.61■□□□□ 0.41
AMBRA1-210ENST00000531542 RRAGCQ9HB90 399 aa17.61■□□□□ 0.41
AMBRA1-210ENST00000531542 BABAM1Q9NWV8 329 aa17.61■□□□□ 0.41
AMBRA1-210ENST00000531542 MAPK8IP3Q9UPT6 1336 aa17.61■□□□□ 0.41
AMBRA1-210ENST00000531542 C21orf2O43822 256 aa17.6■□□□□ 0.41
AMBRA1-210ENST00000531542 CCDC24Q8N4L8 307 aa17.6■□□□□ 0.41
AMBRA1-210ENST00000531542 NIP7Q9Y221 180 aaKnown RBP eCLIP17.6■□□□□ 0.41
AMBRA1-210ENST00000531542 ERBB4Q15303 1308 aa17.59■□□□□ 0.41
AMBRA1-210ENST00000531542 VEGFAP15692 232 aaPredicted RBP17.59■□□□□ 0.41
AMBRA1-210ENST00000531542 NPR1P16066 1061 aa17.59■□□□□ 0.41
AMBRA1-210ENST00000531542 PRPF40BQ6NWY9 871 aaKnown RBP17.59■□□□□ 0.41
AMBRA1-210ENST00000531542 DNAJC5GQ8N7S2 189 aa17.59■□□□□ 0.41
AMBRA1-210ENST00000531542 C7orf43Q8WVR3 580 aa17.59■□□□□ 0.41
AMBRA1-210ENST00000531542 DPY19L2Q6NUT2 758 aa17.58■□□□□ 0.4
AMBRA1-210ENST00000531542 TNRC6CQ9HCJ0 1690 aaKnown RBP17.58■□□□□ 0.4
AMBRA1-210ENST00000531542 HLFQ16534 295 aa17.57■□□□□ 0.4
AMBRA1-210ENST00000531542 SMC1BQ8NDV3 1235 aa17.57■□□□□ 0.4
AMBRA1-210ENST00000531542 TAOK3Q9H2K8 898 aa17.57■□□□□ 0.4
AMBRA1-210ENST00000531542 KDM3BQ7LBC6 1761 aa17.56■□□□□ 0.4
AMBRA1-210ENST00000531542 COL11A2P13942 1736 aaPredicted RBP17.56■□□□□ 0.4
AMBRA1-210ENST00000531542 MAP3K15Q6ZN16 1313 aa17.56■□□□□ 0.4
AMBRA1-210ENST00000531542 THUMPD2Q9BTF0 503 aaKnown RBP17.56■□□□□ 0.4
AMBRA1-210ENST00000531542 LMOD3Q0VAK6 560 aa17.55■□□□□ 0.4
AMBRA1-210ENST00000531542 CRY2Q49AN0 593 aa17.55■□□□□ 0.4
AMBRA1-210ENST00000531542 ERFEQ4G0M1 354 aa17.55■□□□□ 0.4
AMBRA1-210ENST00000531542 NYXQ9GZU5 481 aa17.55■□□□□ 0.4
AMBRA1-210ENST00000531542 IBTKQ9P2D0 1353 aaPredicted RBP17.54■□□□□ 0.4
AMBRA1-210ENST00000531542 MYBBP1AQ9BQG0 1328 aaKnown RBP17.54■□□□□ 0.4
AMBRA1-210ENST00000531542 LAMB4A4D0S4 1761 aa17.54■□□□□ 0.4
AMBRA1-210ENST00000531542 ALDH1B1P30837 517 aa17.54■□□□□ 0.4
AMBRA1-210ENST00000531542 TMPOP42166 694 aaKnown RBP17.54■□□□□ 0.4
AMBRA1-210ENST00000531542 RIPK4P57078 832 aa17.54■□□□□ 0.4
AMBRA1-210ENST00000531542 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
AMBRA1-210ENST00000531542 DLG5Q8TDM6 1919 aa17.53■□□□□ 0.4
AMBRA1-210ENST00000531542 POTECB2RU33 542 aa17.53■□□□□ 0.4
AMBRA1-210ENST00000531542 CCDC93Q567U6 631 aa17.53■□□□□ 0.4
AMBRA1-210ENST00000531542 KIF6Q6ZMV9 814 aa17.53■□□□□ 0.4
AMBRA1-210ENST00000531542 ZNF219Q9P2Y4 722 aaPredicted RBP17.53■□□□□ 0.4
AMBRA1-210ENST00000531542 TSPYL4Q9UJ04 414 aa17.53■□□□□ 0.4
AMBRA1-210ENST00000531542 RIC1Q4ADV7 1423 aa17.53■□□□□ 0.4
AMBRA1-210ENST00000531542 GTF2E1P29083 439 aaPredicted RBP17.52■□□□□ 0.4
AMBRA1-210ENST00000531542 LRP10Q7Z4F1 713 aa17.52■□□□□ 0.4
AMBRA1-210ENST00000531542 RTKN2Q8IZC4 609 aa17.52■□□□□ 0.4
AMBRA1-210ENST00000531542 RRP7AQ9Y3A4 280 aaKnown RBP17.52■□□□□ 0.4
AMBRA1-210ENST00000531542 SLX4Q8IY92 1834 aa17.51■□□□□ 0.39
AMBRA1-210ENST00000531542 ARFGEF2Q9Y6D5 1785 aa17.51■□□□□ 0.39
AMBRA1-210ENST00000531542 DDX10Q13206 875 aaKnown RBP17.51■□□□□ 0.39
AMBRA1-210ENST00000531542 GIGYF2Q6Y7W6 1299 aaKnown RBP17.51■□□□□ 0.39
AMBRA1-210ENST00000531542 TTLL7Q6ZT98 887 aa17.51■□□□□ 0.39
AMBRA1-210ENST00000531542 ZNF34Q8IZ26 560 aa17.51■□□□□ 0.39
AMBRA1-210ENST00000531542 WDR90Q96KV7 1748 aa17.5■□□□□ 0.39
AMBRA1-210ENST00000531542 MYL6BP14649 208 aa17.5■□□□□ 0.39
AMBRA1-210ENST00000531542 HOXA10P31260 410 aaPredicted RBP17.5■□□□□ 0.39
AMBRA1-210ENST00000531542 FKBP4Q02790 459 aaKnown RBP eCLIP17.5■□□□□ 0.39
AMBRA1-210ENST00000531542 PDIA6Q15084 440 aa17.5■□□□□ 0.39
AMBRA1-210ENST00000531542 CC2D2BQ6DHV5 1058 aa17.5■□□□□ 0.39
AMBRA1-210ENST00000531542 GRIPAP1Q4V328 841 aa17.49■□□□□ 0.39
AMBRA1-210ENST00000531542 PARP10Q53GL7 1025 aa17.49■□□□□ 0.39
AMBRA1-210ENST00000531542 NGEFQ8N5V2 710 aa17.49■□□□□ 0.39
AMBRA1-210ENST00000531542 JMYQ8N9B5 988 aa17.49■□□□□ 0.39
AMBRA1-210ENST00000531542 KLRG1Q96E93 195 aa17.49■□□□□ 0.39
AMBRA1-210ENST00000531542 TIAM2Q8IVF5 1701 aa17.49■□□□□ 0.39
AMBRA1-210ENST00000531542 UBN2Q6ZU65 1347 aa17.48■□□□□ 0.39
AMBRA1-210ENST00000531542 CHL1O00533 1208 aa17.48■□□□□ 0.39
AMBRA1-210ENST00000531542 RUNDC1Q96C34 613 aa17.48■□□□□ 0.39
AMBRA1-210ENST00000531542 L3MBTL3Q96JM7 780 aaPredicted RBP17.48■□□□□ 0.39
AMBRA1-210ENST00000531542 DICER1Q9UPY3 1922 aaKnown RBP17.47■□□□□ 0.39
AMBRA1-210ENST00000531542 FAM177BA6PVY3 158 aa17.47■□□□□ 0.39
AMBRA1-210ENST00000531542 PSMD1Q99460 953 aa17.47■□□□□ 0.39
AMBRA1-210ENST00000531542 ZBTB3Q9H5J0 574 aa17.47■□□□□ 0.39
AMBRA1-210ENST00000531542 ABCC12Q96J65 1359 aa17.47■□□□□ 0.39
AMBRA1-210ENST00000531542 SNED1Q8TER0 1413 aa17.47■□□□□ 0.39
AMBRA1-210ENST00000531542 RNF123Q5XPI4 1314 aa17.47■□□□□ 0.39
AMBRA1-210ENST00000531542 IQCA1LA6NCM1 817 aa17.46■□□□□ 0.39
AMBRA1-210ENST00000531542 NTSR2O95665 410 aa17.46■□□□□ 0.39
AMBRA1-210ENST00000531542 SLC10A5Q5PT55 438 aa17.46■□□□□ 0.39
AMBRA1-210ENST00000531542 IFFO2Q5TF58 517 aa17.46■□□□□ 0.39
AMBRA1-210ENST00000531542 SUSD4Q5VX71 490 aa17.46■□□□□ 0.39
AMBRA1-210ENST00000531542 PPP1R42Q7Z4L9 355 aa17.46■□□□□ 0.39
AMBRA1-210ENST00000531542 NUTM1Q86Y26 1132 aa17.46■□□□□ 0.39
AMBRA1-210ENST00000531542 CRAMP1Q96RY5 1269 aa17.46■□□□□ 0.39
AMBRA1-210ENST00000531542 DDNO94850 711 aaPredicted RBP17.45■□□□□ 0.38
AMBRA1-210ENST00000531542 GPTP24298 496 aa17.45■□□□□ 0.38
AMBRA1-210ENST00000531542 TRIM35Q9UPQ4 493 aa17.45■□□□□ 0.38
AMBRA1-210ENST00000531542 CCDC88AQ3V6T2 1871 aa17.45■□□□□ 0.38
AMBRA1-210ENST00000531542 FZD9O00144 591 aa17.44■□□□□ 0.38
AMBRA1-210ENST00000531542 HOXB7P09629 217 aa17.44■□□□□ 0.38
AMBRA1-210ENST00000531542 EIF2S2P20042 333 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms