RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	ZBTB1	Q9Y2K1	713 aa		18.21	■□□□□ 0.51
NR1H3-231	ENST00000529540	PXDNL	A1KZ92	1463 aa		18.21	■□□□□ 0.51
NR1H3-231	ENST00000529540		A0A087WZG4	1122 aa		18.2	■□□□□ 0.5
NR1H3-231	ENST00000529540	INTS5	Q6P9B9	1019 aa	Known RBP	18.2	■□□□□ 0.5
NR1H3-231	ENST00000529540	PHAX	Q9H814	394 aa	Known RBP	18.2	■□□□□ 0.5
NR1H3-231	ENST00000529540	BRPF3	Q9ULD4	1205 aa		18.2	■□□□□ 0.5
NR1H3-231	ENST00000529540	TAF1L	Q8IZX4	1826 aa		18.2	■□□□□ 0.5
NR1H3-231	ENST00000529540	KSR2	Q6VAB6	950 aa		18.19	■□□□□ 0.5
NR1H3-231	ENST00000529540	KIF6	Q6ZMV9	814 aa		18.19	■□□□□ 0.5
NR1H3-231	ENST00000529540	COPS6	Q7L5N1	327 aa		18.19	■□□□□ 0.5
NR1H3-231	ENST00000529540	G2E3	Q7L622	706 aa		18.19	■□□□□ 0.5
NR1H3-231	ENST00000529540	XAGE3	Q8WTP9	111 aa		18.19	■□□□□ 0.5
NR1H3-231	ENST00000529540	C4B	P0C0L5	1744 aa		18.19	■□□□□ 0.5
NR1H3-231	ENST00000529540	ABCC4	O15439	1325 aa		18.19	■□□□□ 0.5
NR1H3-231	ENST00000529540	ANXA1	P04083	346 aa		18.18	■□□□□ 0.5
NR1H3-231	ENST00000529540	EIF5	P55010	431 aa	Known RBP	18.18	■□□□□ 0.5
NR1H3-231	ENST00000529540	ANKRD13D	Q6ZTN6	518 aa		18.18	■□□□□ 0.5
NR1H3-231	ENST00000529540	AK7	Q96M32	723 aa		18.18	■□□□□ 0.5
NR1H3-231	ENST00000529540	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.18	■□□□□ 0.5
NR1H3-231	ENST00000529540	RGL2	O15211	777 aa		18.18	■□□□□ 0.5
NR1H3-231	ENST00000529540	FRAT2	O75474	233 aa	Predicted RBP	18.18	■□□□□ 0.5
NR1H3-231	ENST00000529540	ADRA2B	P18089	450 aa		18.18	■□□□□ 0.5
NR1H3-231	ENST00000529540	PLBD2	Q8NHP8	589 aa		18.18	■□□□□ 0.5
NR1H3-231	ENST00000529540	LRRC4B	Q9NT99	713 aa		18.18	■□□□□ 0.5
NR1H3-231	ENST00000529540	RTCB	Q9Y3I0	505 aa	Known RBP	18.18	■□□□□ 0.5
NR1H3-231	ENST00000529540	RPS6KA4	O75676	772 aa		18.17	■□□□□ 0.5
NR1H3-231	ENST00000529540	CCT4	P50991	539 aa	Known RBP	18.17	■□□□□ 0.5
NR1H3-231	ENST00000529540	AIMP1	Q12904	312 aa	Known RBP	18.17	■□□□□ 0.5
NR1H3-231	ENST00000529540	BECN1	Q14457	450 aa		18.17	■□□□□ 0.5
NR1H3-231	ENST00000529540	RIC3	Q7Z5B4	369 aa		18.17	■□□□□ 0.5
NR1H3-231	ENST00000529540	DNAAF4	Q8WXU2	420 aa		18.17	■□□□□ 0.5
NR1H3-231	ENST00000529540	RTN4	Q9NQC3	1192 aa	Known RBP	18.17	■□□□□ 0.5
NR1H3-231	ENST00000529540	PI4KAP2	A4QPH2	592 aa		18.16	■□□□□ 0.5
NR1H3-231	ENST00000529540	NEXN	Q0ZGT2	675 aa		18.16	■□□□□ 0.5
NR1H3-231	ENST00000529540	PI4KAP1	Q8N8J0	262 aa		18.16	■□□□□ 0.5
NR1H3-231	ENST00000529540	CAMKK2	Q96RR4	588 aa		18.16	■□□□□ 0.5
NR1H3-231	ENST00000529540	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.16	■□□□□ 0.5
NR1H3-231	ENST00000529540	COL15A1	P39059	1388 aa		18.16	■□□□□ 0.5
NR1H3-231	ENST00000529540	ERVV-1	B6SEH8	477 aa		18.15	■□□□□ 0.5
NR1H3-231	ENST00000529540	GNPAT	O15228	680 aa		18.15	■□□□□ 0.5
NR1H3-231	ENST00000529540	PIP4K2A	P48426	406 aa	Predicted RBP	18.15	■□□□□ 0.5
NR1H3-231	ENST00000529540	PROM2	Q8N271	834 aa		18.15	■□□□□ 0.5
NR1H3-231	ENST00000529540	DDX19B	Q9UMR2	479 aa		18.15	■□□□□ 0.5
NR1H3-231	ENST00000529540	ATP10D	Q9P241	1426 aa		18.15	■□□□□ 0.5
NR1H3-231	ENST00000529540	IBTK	Q9P2D0	1353 aa	Predicted RBP	18.15	■□□□□ 0.5
NR1H3-231	ENST00000529540	KCNQ4	P56696	695 aa		18.15	■□□□□ 0.5
NR1H3-231	ENST00000529540	HSP90AB3P	Q58FF7	597 aa		18.15	■□□□□ 0.5
NR1H3-231	ENST00000529540	INTS3	Q68E01	1043 aa	Known RBP	18.15	■□□□□ 0.5
NR1H3-231	ENST00000529540	MAP3K15	Q6ZN16	1313 aa		18.14	■□□□□ 0.49
NR1H3-231	ENST00000529540	ADCY9	O60503	1353 aa		18.14	■□□□□ 0.49
NR1H3-231	ENST00000529540	SSFA2	P28290	1259 aa		18.14	■□□□□ 0.49
NR1H3-231	ENST00000529540	EN1	Q05925	392 aa	Predicted RBP	18.14	■□□□□ 0.49
NR1H3-231	ENST00000529540	MVP	Q14764	893 aa	Known RBP	18.14	■□□□□ 0.49
NR1H3-231	ENST00000529540	DZIP3	Q86Y13	1208 aa	Known RBP	18.14	■□□□□ 0.49
NR1H3-231	ENST00000529540	FLAD1	Q8NFF5	587 aa		18.14	■□□□□ 0.49
NR1H3-231	ENST00000529540	MAP3K2	Q9Y2U5	619 aa		18.14	■□□□□ 0.49
NR1H3-231	ENST00000529540	MYH14	Q7Z406	1995 aa	Known RBP	18.13	■□□□□ 0.49
NR1H3-231	ENST00000529540	SLC4A10	Q6U841	1118 aa		18.13	■□□□□ 0.49
NR1H3-231	ENST00000529540	ZNF652	Q9Y2D9	606 aa		18.13	■□□□□ 0.49
NR1H3-231	ENST00000529540	ITPRIP	Q8IWB1	547 aa		18.12	■□□□□ 0.49
NR1H3-231	ENST00000529540	PANK1	Q8TE04	598 aa		18.12	■□□□□ 0.49
NR1H3-231	ENST00000529540	METTL22	Q9BUU2	404 aa	Predicted RBP	18.12	■□□□□ 0.49
NR1H3-231	ENST00000529540	SRCIN1	Q9C0H9	1055 aa		18.12	■□□□□ 0.49
NR1H3-231	ENST00000529540	COG6	Q9Y2V7	657 aa		18.12	■□□□□ 0.49
NR1H3-231	ENST00000529540		F6X3S4	739 aa		18.12	■□□□□ 0.49
NR1H3-231	ENST00000529540	ALDH1L1	O75891	902 aa		18.12	■□□□□ 0.49
NR1H3-231	ENST00000529540	EZH2	Q15910	746 aa	Known RBP	18.12	■□□□□ 0.49
NR1H3-231	ENST00000529540	TRAPPC3L	Q5T215	181 aa		18.12	■□□□□ 0.49
NR1H3-231	ENST00000529540	TTLL7	Q6ZT98	887 aa		18.12	■□□□□ 0.49
NR1H3-231	ENST00000529540	TMEM57	Q8N5G2	664 aa		18.12	■□□□□ 0.49
NR1H3-231	ENST00000529540	LINS1	Q8NG48	757 aa		18.12	■□□□□ 0.49
NR1H3-231	ENST00000529540	ARX	Q96QS3	562 aa		18.12	■□□□□ 0.49
NR1H3-231	ENST00000529540	N4BP2	Q86UW6	1770 aa	Predicted RBP	18.11	■□□□□ 0.49
NR1H3-231	ENST00000529540	RLBP1	P12271	317 aa		18.11	■□□□□ 0.49
NR1H3-231	ENST00000529540	CLEC4G	Q6UXB4	293 aa		18.11	■□□□□ 0.49
NR1H3-231	ENST00000529540	HDAC5	Q9UQL6	1122 aa		18.11	■□□□□ 0.49
NR1H3-231	ENST00000529540	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.1	■□□□□ 0.49
NR1H3-231	ENST00000529540	ARFGEF2	Q9Y6D5	1785 aa		18.1	■□□□□ 0.49
NR1H3-231	ENST00000529540	ZPR1	O75312	459 aa		18.09	■□□□□ 0.49
NR1H3-231	ENST00000529540	BEND3	Q5T5X7	828 aa		18.09	■□□□□ 0.49
NR1H3-231	ENST00000529540	AKT1S1	Q96B36	256 aa		18.09	■□□□□ 0.49
NR1H3-231	ENST00000529540	ZBTB3	Q9H5J0	574 aa		18.09	■□□□□ 0.49
NR1H3-231	ENST00000529540	TFCP2L1	Q9NZI6	479 aa		18.09	■□□□□ 0.49
NR1H3-231	ENST00000529540	NARF	Q9UHQ1	456 aa		18.09	■□□□□ 0.49
NR1H3-231	ENST00000529540	NUP188	Q5SRE5	1749 aa		18.09	■□□□□ 0.49
NR1H3-231	ENST00000529540	SEC24B	O95487	1268 aa		18.09	■□□□□ 0.49
NR1H3-231	ENST00000529540	RFC4	P35249	363 aa		18.09	■□□□□ 0.49
NR1H3-231	ENST00000529540	FAM43A	Q8N2R8	423 aa		18.09	■□□□□ 0.49
NR1H3-231	ENST00000529540	UPF1	Q92900	1129 aa	Known RBP eCLIP	18.09	■□□□□ 0.49
NR1H3-231	ENST00000529540	STK32B	Q9NY57	414 aa		18.09	■□□□□ 0.49
NR1H3-231	ENST00000529540	UBR3	Q6ZT12	1888 aa		18.08	■□□□□ 0.48
NR1H3-231	ENST00000529540	TCIRG1	Q13488	830 aa		18.08	■□□□□ 0.48
NR1H3-231	ENST00000529540	DEFB132	Q7Z7B7	95 aa		18.08	■□□□□ 0.48
NR1H3-231	ENST00000529540	TBC1D32	Q96NH3	1257 aa		18.08	■□□□□ 0.48
NR1H3-231	ENST00000529540	TBC1D2B	Q9UPU7	963 aa		18.08	■□□□□ 0.48
NR1H3-231	ENST00000529540	TNN	Q9UQP3	1299 aa		18.08	■□□□□ 0.48
NR1H3-231	ENST00000529540	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.07	■□□□□ 0.48
NR1H3-231	ENST00000529540	CAMTA2	O94983	1202 aa		18.07	■□□□□ 0.48
NR1H3-231	ENST00000529540	TRIM28	Q13263	835 aa	Known RBP	18.07	■□□□□ 0.48
NR1H3-231	ENST00000529540	MYD88	Q99836	296 aa		18.07	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms