RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 TEX13AQ9BXU3 409 aaPredicted RBP27.75■■■□□ 2.03
PKP3-205ENST00000527442 LTBP3Q9NS15 1303 aa27.74■■■□□ 2.03
PKP3-205ENST00000527442 GNAT3A8MTJ3 354 aa27.74■■■□□ 2.03
PKP3-205ENST00000527442 U2SURPO15042 1029 aaKnown RBP27.73■■■□□ 2.03
PKP3-205ENST00000527442 CAMTA2O94983 1202 aa27.73■■■□□ 2.03
PKP3-205ENST00000527442 A1BGP04217 495 aa27.73■■■□□ 2.03
PKP3-205ENST00000527442 GAS2L2Q8NHY3 880 aa27.73■■■□□ 2.03
PKP3-205ENST00000527442 TAOK3Q9H2K8 898 aa27.73■■■□□ 2.03
PKP3-205ENST00000527442 CNBD1Q8NA66 436 aa27.72■■■□□ 2.03
PKP3-205ENST00000527442 PNISRQ8TF01 805 aaKnown RBP27.72■■■□□ 2.03
PKP3-205ENST00000527442 POTEIP0CG38 1075 aa27.71■■■□□ 2.03
PKP3-205ENST00000527442 POTEJP0CG39 1038 aa27.71■■■□□ 2.03
PKP3-205ENST00000527442 FMNL2Q96PY5 1086 aa27.71■■■□□ 2.03
PKP3-205ENST00000527442 CEMIPQ8WUJ3 1361 aa27.71■■■□□ 2.03
PKP3-205ENST00000527442 PRPF40BQ6NWY9 871 aaKnown RBP27.7■■■□□ 2.02
PKP3-205ENST00000527442 SETDB2Q96T68 719 aa27.7■■■□□ 2.02
PKP3-205ENST00000527442 KCNQ3O43525 872 aa27.69■■■□□ 2.02
PKP3-205ENST00000527442 DDNO94850 711 aaPredicted RBP27.69■■■□□ 2.02
PKP3-205ENST00000527442 SRGNP10124 158 aa27.69■■■□□ 2.02
PKP3-205ENST00000527442 STYK1Q6J9G0 422 aa27.69■■■□□ 2.02
PKP3-205ENST00000527442 CHADLQ6NUI6 762 aa27.69■■■□□ 2.02
PKP3-205ENST00000527442 CNKSR1Q969H4 720 aa27.69■■■□□ 2.02
PKP3-205ENST00000527442 NPHP1O15259 732 aa27.68■■■□□ 2.02
PKP3-205ENST00000527442 SCN4AP35499 1836 aa27.68■■■□□ 2.02
PKP3-205ENST00000527442 ST5P78524 1137 aa27.67■■■□□ 2.02
PKP3-205ENST00000527442 DZIP3Q86Y13 1208 aaKnown RBP27.67■■■□□ 2.02
PKP3-205ENST00000527442 PIP4K2AP48426 406 aaPredicted RBP27.66■■■□□ 2.02
PKP3-205ENST00000527442 NPM2Q86SE8 214 aaKnown RBP27.66■■■□□ 2.02
PKP3-205ENST00000527442 CREBZFQ9NS37 354 aa27.66■■■□□ 2.02
PKP3-205ENST00000527442 MKRN1Q9UHC7 482 aaKnown RBP27.66■■■□□ 2.02
PKP3-205ENST00000527442 MASTLQ96GX5 879 aa27.65■■■□□ 2.02
PKP3-205ENST00000527442 BTBD11A6QL63 1104 aa27.63■■■□□ 2.01
PKP3-205ENST00000527442 SOGA3Q5TF21 947 aa27.63■■■□□ 2.01
PKP3-205ENST00000527442 PHACTR3Q96KR7 559 aa27.63■■■□□ 2.01
PKP3-205ENST00000527442 USP16Q9Y5T5 823 aa27.63■■■□□ 2.01
PKP3-205ENST00000527442 WDR43Q15061 677 aaKnown RBP eCLIP27.62■■■□□ 2.01
PKP3-205ENST00000527442 NUDCQ9Y266 331 aa27.62■■■□□ 2.01
PKP3-205ENST00000527442 PRAMEF22A3QJZ6 481 aa27.61■■■□□ 2.01
PKP3-205ENST00000527442 C7orf43Q8WVR3 580 aa27.61■■■□□ 2.01
PKP3-205ENST00000527442 PRKAR2BP31323 418 aa27.6■■■□□ 2.01
PKP3-205ENST00000527442 NBPF5PQ86XG9 351 aaPredicted RBP27.6■■■□□ 2.01
PKP3-205ENST00000527442 ADAMTSL1Q8N6G6 1762 aa27.6■■■□□ 2.01
PKP3-205ENST00000527442 FAM9BQ8IZU0 186 aa27.59■■■□□ 2.01
PKP3-205ENST00000527442 L3MBTL3Q96JM7 780 aaPredicted RBP27.59■■■□□ 2.01
PKP3-205ENST00000527442 RSPH6AQ9H0K4 717 aa27.59■■■□□ 2.01
PKP3-205ENST00000527442 PASKQ96RG2 1323 aa27.59■■■□□ 2.01
PKP3-205ENST00000527442 CNTNAP1P78357 1384 aa27.59■■■□□ 2.01
PKP3-205ENST00000527442 CCDC93Q567U6 631 aa27.58■■■□□ 2.01
PKP3-205ENST00000527442 IQCA1LA6NCM1 817 aa27.57■■■□□ 2
PKP3-205ENST00000527442 CLEC4GQ6UXB4 293 aa27.57■■■□□ 2
PKP3-205ENST00000527442 LDHDQ86WU2 507 aa27.57■■■□□ 2
PKP3-205ENST00000527442 TAF1DQ9H5J8 278 aaPredicted RBP27.57■■■□□ 2
PKP3-205ENST00000527442 ZNF541Q9H0D2 1346 aa27.57■■■□□ 2
PKP3-205ENST00000527442 LAMB4A4D0S4 1761 aa27.57■■■□□ 2
PKP3-205ENST00000527442 NPR1P16066 1061 aa27.56■■■□□ 2
PKP3-205ENST00000527442 OLFM4Q6UX06 510 aa27.55■■■□□ 2
PKP3-205ENST00000527442 ADAMTS8Q9UP79 889 aa27.55■■■□□ 2
PKP3-205ENST00000527442 ZNF652Q9Y2D9 606 aa27.55■■■□□ 2
PKP3-205ENST00000527442 FOXN1O15353 648 aa27.54■■■□□ 2
PKP3-205ENST00000527442 FKBP4Q02790 459 aaKnown RBP eCLIP27.54■■■□□ 2
PKP3-205ENST00000527442 ZNF277Q9NRM2 450 aaPredicted RBP27.54■■■□□ 2
PKP3-205ENST00000527442 KLRG2A4D1S0 409 aaPredicted RBP27.53■■■□□ 2
PKP3-205ENST00000527442 NBPF26B4DH59 902 aa27.53■■■□□ 2
PKP3-205ENST00000527442 SNRPA1P09661 255 aaKnown RBP27.53■■■□□ 2
PKP3-205ENST00000527442 NBPF10Q6P3W6 841 aaKnown RBP27.53■■■□□ 2
PKP3-205ENST00000527442 MCM10Q7L590 875 aa27.53■■■□□ 2
PKP3-205ENST00000527442 NBPF15Q8N660 670 aa27.53■■■□□ 2
PKP3-205ENST00000527442 NIP7Q9Y221 180 aaKnown RBP eCLIP27.52■■■□□ 2
PKP3-205ENST00000527442 U2AF1L5P0DN76 240 aaPredicted RBP27.51■■□□□ 1.99
PKP3-205ENST00000527442 U2AF1Q01081 240 aaKnown RBP eCLIP27.51■■□□□ 1.99
PKP3-205ENST00000527442 FAM177BA6PVY3 158 aa27.5■■□□□ 1.99
PKP3-205ENST00000527442 ITGBL1O95965 494 aaPredicted RBP27.5■■□□□ 1.99
PKP3-205ENST00000527442 EAPPQ56P03 285 aaPredicted RBP27.5■■□□□ 1.99
PKP3-205ENST00000527442 TPTE2Q6XPS3 522 aa27.49■■□□□ 1.99
PKP3-205ENST00000527442 NUP98P52948 1817 aa27.48■■□□□ 1.99
PKP3-205ENST00000527442 TMEM88BA6NKF7 163 aa27.48■■□□□ 1.99
PKP3-205ENST00000527442 VEGFBP49765 207 aa27.48■■□□□ 1.99
PKP3-205ENST00000527442 DCTN1Q14203 1278 aa27.48■■□□□ 1.99
PKP3-205ENST00000527442 HACL1Q9UJ83 578 aa27.48■■□□□ 1.99
PKP3-205ENST00000527442 SNED1Q8TER0 1413 aa27.48■■□□□ 1.99
PKP3-205ENST00000527442 RGL2O15211 777 aa27.47■■□□□ 1.99
PKP3-205ENST00000527442 RTF1Q92541 710 aaKnown RBP27.47■■□□□ 1.99
PKP3-205ENST00000527442 RNF123Q5XPI4 1314 aa27.46■■□□□ 1.99
PKP3-205ENST00000527442 KDM3BQ7LBC6 1761 aa27.46■■□□□ 1.99
PKP3-205ENST00000527442 DLG5Q8TDM6 1919 aa27.46■■□□□ 1.99
PKP3-205ENST00000527442 EPHX2P34913 555 aa27.46■■□□□ 1.99
PKP3-205ENST00000527442 HLFQ16534 295 aa27.46■■□□□ 1.99
PKP3-205ENST00000527442 RTKN2Q8IZC4 609 aa27.46■■□□□ 1.99
PKP3-205ENST00000527442 COL4A5P29400 1685 aa27.46■■□□□ 1.99
PKP3-205ENST00000527442 IARSP41252 1262 aaKnown RBP27.45■■□□□ 1.98
PKP3-205ENST00000527442 PRDM10Q9NQV6 1147 aa27.45■■□□□ 1.98
PKP3-205ENST00000527442 CLEC11AQ9Y240 323 aa27.45■■□□□ 1.98
PKP3-205ENST00000527442 ABCC12Q96J65 1359 aa27.45■■□□□ 1.98
PKP3-205ENST00000527442 LTBP1Q14766 1721 aa27.44■■□□□ 1.98
PKP3-205ENST00000527442 SYNE4Q8N205 404 aa27.44■■□□□ 1.98
PKP3-205ENST00000527442 FZD9O00144 591 aa27.43■■□□□ 1.98
PKP3-205ENST00000527442 PNNQ9H307 717 aaKnown RBP27.43■■□□□ 1.98
PKP3-205ENST00000527442 CTCFP49711 727 aaPredicted RBP27.42■■□□□ 1.98
PKP3-205ENST00000527442 MAP1SQ66K74 1059 aaPredicted RBP27.42■■□□□ 1.98
PKP3-205ENST00000527442 AIDAQ96BJ3 306 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms