RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 ZNF219Q9P2Y4 722 aaPredicted RBP16.05■□□□□ 0.16
CHKA-203ENST00000525155 SRGNP10124 158 aa16.04■□□□□ 0.16
CHKA-203ENST00000525155 PDE6BP35913 854 aa16.04■□□□□ 0.16
CHKA-203ENST00000525155 KLRG2A4D1S0 409 aaPredicted RBP16.03■□□□□ 0.16
CHKA-203ENST00000525155 GLTPD2A6NH11 291 aa16.03■□□□□ 0.16
CHKA-203ENST00000525155 CLEC4GQ6UXB4 293 aa16.03■□□□□ 0.16
CHKA-203ENST00000525155 ADAMTS8Q9UP79 889 aa16.03■□□□□ 0.16
CHKA-203ENST00000525155 APLP1P51693 650 aa16.02■□□□□ 0.16
CHKA-203ENST00000525155 EIF4A1P60842 406 aaKnown RBP16.02■□□□□ 0.16
CHKA-203ENST00000525155 CNBD1Q8NA66 436 aa16.02■□□□□ 0.16
CHKA-203ENST00000525155 PNISRQ8TF01 805 aaKnown RBP16.02■□□□□ 0.16
CHKA-203ENST00000525155 RUNDC1Q96C34 613 aa16.02■□□□□ 0.16
CHKA-203ENST00000525155 KDM2BQ8NHM5 1336 aa16.01■□□□□ 0.15
CHKA-203ENST00000525155 NFE2L2Q16236 605 aa16.01■□□□□ 0.15
CHKA-203ENST00000525155 SBF1O95248 1867 aa16■□□□□ 0.15
CHKA-203ENST00000525155 ANKRD31Q8N7Z5 1873 aa16■□□□□ 0.15
CHKA-203ENST00000525155 STYK1Q6J9G0 422 aa16■□□□□ 0.15
CHKA-203ENST00000525155 OLFM4Q6UX06 510 aa16■□□□□ 0.15
CHKA-203ENST00000525155 TTLL7Q6ZT98 887 aa16■□□□□ 0.15
CHKA-203ENST00000525155 PDZRN3Q9UPQ7 1066 aa16■□□□□ 0.15
CHKA-203ENST00000525155 FSTL1Q12841 308 aa15.99■□□□□ 0.15
CHKA-203ENST00000525155 CCDC184Q52MB2 194 aa15.99■□□□□ 0.15
CHKA-203ENST00000525155 PRPF40BQ6NWY9 871 aaKnown RBP15.99■□□□□ 0.15
CHKA-203ENST00000525155 MASTLQ96GX5 879 aa15.99■□□□□ 0.15
CHKA-203ENST00000525155 ZC3H4Q9UPT8 1303 aaKnown RBP15.98■□□□□ 0.15
CHKA-203ENST00000525155 FAM177BA6PVY3 158 aa15.98■□□□□ 0.15
CHKA-203ENST00000525155 LMOD3Q0VAK6 560 aa15.98■□□□□ 0.15
CHKA-203ENST00000525155 LRP10Q7Z4F1 713 aa15.98■□□□□ 0.15
CHKA-203ENST00000525155 NBPF5PQ86XG9 351 aaPredicted RBP15.98■□□□□ 0.15
CHKA-203ENST00000525155 NGEFQ8N5V2 710 aa15.98■□□□□ 0.15
CHKA-203ENST00000525155 CNKSR1Q969H4 720 aa15.98■□□□□ 0.15
CHKA-203ENST00000525155 NIP7Q9Y221 180 aaKnown RBP eCLIP15.98■□□□□ 0.15
CHKA-203ENST00000525155 RGL2O15211 777 aa15.97■□□□□ 0.15
CHKA-203ENST00000525155 VEGFAP15692 232 aaPredicted RBP15.97■□□□□ 0.15
CHKA-203ENST00000525155 ST5P78524 1137 aa15.97■□□□□ 0.15
CHKA-203ENST00000525155 NPM2Q86SE8 214 aaKnown RBP15.97■□□□□ 0.15
CHKA-203ENST00000525155 SLC51AQ86UW1 340 aa15.97■□□□□ 0.15
CHKA-203ENST00000525155 RRP7AQ9Y3A4 280 aaKnown RBP15.97■□□□□ 0.15
CHKA-203ENST00000525155 SCN7AQ01118 1682 aa15.97■□□□□ 0.15
CHKA-203ENST00000525155 LTBP3Q9NS15 1303 aa15.96■□□□□ 0.15
CHKA-203ENST00000525155 PDIA6Q15084 440 aa15.96■□□□□ 0.15
CHKA-203ENST00000525155 ERFEQ4G0M1 354 aa15.96■□□□□ 0.15
CHKA-203ENST00000525155 IFFO2Q5TF58 517 aa15.96■□□□□ 0.15
CHKA-203ENST00000525155 TPTE2Q6XPS3 522 aa15.96■□□□□ 0.15
CHKA-203ENST00000525155 C16orf71Q8IYS4 520 aaPredicted RBP15.96■□□□□ 0.15
CHKA-203ENST00000525155 PCNTO95613 3336 aa15.96■□□□□ 0.15
CHKA-203ENST00000525155 DDNO94850 711 aaPredicted RBP15.95■□□□□ 0.14
CHKA-203ENST00000525155 MIER1Q8N108 512 aa15.95■□□□□ 0.14
CHKA-203ENST00000525155 DLEC1Q9Y238 1755 aa15.95■□□□□ 0.14
CHKA-203ENST00000525155 COL11A2P13942 1736 aaPredicted RBP15.94■□□□□ 0.14
CHKA-203ENST00000525155 SLX4Q8IY92 1834 aa15.94■□□□□ 0.14
CHKA-203ENST00000525155 ERVV-1B6SEH8 477 aa15.94■□□□□ 0.14
CHKA-203ENST00000525155 POTEIP0CG38 1075 aa15.94■□□□□ 0.14
CHKA-203ENST00000525155 POTEJP0CG39 1038 aa15.94■□□□□ 0.14
CHKA-203ENST00000525155 NPR1P16066 1061 aa15.94■□□□□ 0.14
CHKA-203ENST00000525155 TMPOP42166 694 aaKnown RBP15.94■□□□□ 0.14
CHKA-203ENST00000525155 RIPK4P57078 832 aa15.94■□□□□ 0.14
CHKA-203ENST00000525155 NUTM1Q86Y26 1132 aa15.94■□□□□ 0.14
CHKA-203ENST00000525155 CCDC146Q8IYE0 955 aa15.94■□□□□ 0.14
CHKA-203ENST00000525155 TAOK3Q9H2K8 898 aa15.94■□□□□ 0.14
CHKA-203ENST00000525155 ZNF652Q9Y2D9 606 aa15.94■□□□□ 0.14
CHKA-203ENST00000525155 UBN2Q6ZU65 1347 aa15.94■□□□□ 0.14
CHKA-203ENST00000525155 MYL6BP14649 208 aa15.93■□□□□ 0.14
CHKA-203ENST00000525155 PROSER3Q2NL68 480 aa15.93■□□□□ 0.14
CHKA-203ENST00000525155 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
CHKA-203ENST00000525155 SUSD4Q5VX71 490 aa15.93■□□□□ 0.14
CHKA-203ENST00000525155 FAM9BQ8IZU0 186 aa15.93■□□□□ 0.14
CHKA-203ENST00000525155 SMC1BQ8NDV3 1235 aa15.93■□□□□ 0.14
CHKA-203ENST00000525155 KLRG1Q96E93 195 aa15.93■□□□□ 0.14
CHKA-203ENST00000525155 MAP3K15Q6ZN16 1313 aa15.93■□□□□ 0.14
CHKA-203ENST00000525155 ABCC12Q96J65 1359 aa15.92■□□□□ 0.14
CHKA-203ENST00000525155 NPHP1O15259 732 aa15.92■□□□□ 0.14
CHKA-203ENST00000525155 CRY2Q49AN0 593 aa15.92■□□□□ 0.14
CHKA-203ENST00000525155 C3orf67Q6ZVT6 689 aa15.92■□□□□ 0.14
CHKA-203ENST00000525155 ZNF34Q8IZ26 560 aa15.92■□□□□ 0.14
CHKA-203ENST00000525155 JMYQ8N9B5 988 aa15.92■□□□□ 0.14
CHKA-203ENST00000525155 ANXA1P04083 346 aa15.91■□□□□ 0.14
CHKA-203ENST00000525155 GPTP24298 496 aa15.91■□□□□ 0.14
CHKA-203ENST00000525155 DPY19L2Q6NUT2 758 aa15.91■□□□□ 0.14
CHKA-203ENST00000525155 ZBTB3Q9H5J0 574 aa15.91■□□□□ 0.14
CHKA-203ENST00000525155 ZNF277Q9NRM2 450 aaPredicted RBP15.91■□□□□ 0.14
CHKA-203ENST00000525155 BCORQ6W2J9 1755 aa15.9■□□□□ 0.14
CHKA-203ENST00000525155 APAF1O14727 1248 aa15.9■□□□□ 0.14
CHKA-203ENST00000525155 CALD1Q05682 793 aaKnown RBP15.9■□□□□ 0.14
CHKA-203ENST00000525155 KRT24Q2M2I5 525 aa15.9■□□□□ 0.14
CHKA-203ENST00000525155 SNED1Q8TER0 1413 aa15.9■□□□□ 0.14
CHKA-203ENST00000525155 FKBP4Q02790 459 aaKnown RBP eCLIP15.89■□□□□ 0.13
CHKA-203ENST00000525155 CCDC93Q567U6 631 aa15.89■□□□□ 0.13
CHKA-203ENST00000525155 TSPYL4Q9UJ04 414 aa15.89■□□□□ 0.13
CHKA-203ENST00000525155 TRIM35Q9UPQ4 493 aa15.89■□□□□ 0.13
CHKA-203ENST00000525155 FER1L6Q2WGJ9 1857 aa15.88■□□□□ 0.13
CHKA-203ENST00000525155 EIF2S2P20042 333 aaKnown RBP15.88■□□□□ 0.13
CHKA-203ENST00000525155 HOXA10P31260 410 aaPredicted RBP15.88■□□□□ 0.13
CHKA-203ENST00000525155 NEUROD2Q15784 382 aa15.88■□□□□ 0.13
CHKA-203ENST00000525155 GIGYF2Q6Y7W6 1299 aaKnown RBP15.88■□□□□ 0.13
CHKA-203ENST00000525155 SYNE4Q8N205 404 aa15.88■□□□□ 0.13
CHKA-203ENST00000525155 ZNF541Q9H0D2 1346 aa15.88■□□□□ 0.13
CHKA-203ENST00000525155 NTSR2O95665 410 aa15.87■□□□□ 0.13
CHKA-203ENST00000525155 CCDC27Q2M243 656 aa15.87■□□□□ 0.13
CHKA-203ENST00000525155 SOGA3Q5TF21 947 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms