RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 CNKSR1Q969H4 720 aa18.63■□□□□ 0.57
CSTF3-206ENST00000524827 KCNQ3O43525 872 aa18.62■□□□□ 0.57
CSTF3-206ENST00000524827 SRGNP10124 158 aa18.62■□□□□ 0.57
CSTF3-206ENST00000524827 ST5P78524 1137 aa18.62■□□□□ 0.57
CSTF3-206ENST00000524827 CHADLQ6NUI6 762 aa18.62■□□□□ 0.57
CSTF3-206ENST00000524827 NPC1L1Q9UHC9 1359 aa18.62■□□□□ 0.57
CSTF3-206ENST00000524827 DDNO94850 711 aaPredicted RBP18.61■□□□□ 0.57
CSTF3-206ENST00000524827 POTEIP0CG38 1075 aa18.61■□□□□ 0.57
CSTF3-206ENST00000524827 POTEJP0CG39 1038 aa18.61■□□□□ 0.57
CSTF3-206ENST00000524827 CNGB1Q14028 1251 aaPredicted RBP18.61■□□□□ 0.57
CSTF3-206ENST00000524827 DZIP3Q86Y13 1208 aaKnown RBP18.61■□□□□ 0.57
CSTF3-206ENST00000524827 SOGA3Q5TF21 947 aa18.6■□□□□ 0.57
CSTF3-206ENST00000524827 MASTLQ96GX5 879 aa18.6■□□□□ 0.57
CSTF3-206ENST00000524827 CREBZFQ9NS37 354 aa18.6■□□□□ 0.57
CSTF3-206ENST00000524827 BTBD11A6QL63 1104 aa18.59■□□□□ 0.57
CSTF3-206ENST00000524827 PIP4K2AP48426 406 aaPredicted RBP18.59■□□□□ 0.57
CSTF3-206ENST00000524827 PHACTR3Q96KR7 559 aa18.59■□□□□ 0.57
CSTF3-206ENST00000524827 PRKAR2BP31323 418 aa18.58■□□□□ 0.56
CSTF3-206ENST00000524827 MKRN1Q9UHC7 482 aaKnown RBP18.58■□□□□ 0.56
CSTF3-206ENST00000524827 USP16Q9Y5T5 823 aa18.58■□□□□ 0.56
CSTF3-206ENST00000524827 NBPF5PQ86XG9 351 aaPredicted RBP18.57■□□□□ 0.56
CSTF3-206ENST00000524827 PRAMEF22A3QJZ6 481 aa18.56■□□□□ 0.56
CSTF3-206ENST00000524827 CCDC93Q567U6 631 aa18.56■□□□□ 0.56
CSTF3-206ENST00000524827 CLEC4GQ6UXB4 293 aa18.56■□□□□ 0.56
CSTF3-206ENST00000524827 C7orf43Q8WVR3 580 aa18.56■□□□□ 0.56
CSTF3-206ENST00000524827 RSPH6AQ9H0K4 717 aa18.56■□□□□ 0.56
CSTF3-206ENST00000524827 IQCA1LA6NCM1 817 aa18.55■□□□□ 0.56
CSTF3-206ENST00000524827 L3MBTL3Q96JM7 780 aaPredicted RBP18.55■□□□□ 0.56
CSTF3-206ENST00000524827 ZNF652Q9Y2D9 606 aa18.55■□□□□ 0.56
CSTF3-206ENST00000524827 SCN4AP35499 1836 aa18.55■□□□□ 0.56
CSTF3-206ENST00000524827 PASKQ96RG2 1323 aa18.54■□□□□ 0.56
CSTF3-206ENST00000524827 NPR1P16066 1061 aa18.54■□□□□ 0.56
CSTF3-206ENST00000524827 LDHDQ86WU2 507 aa18.54■□□□□ 0.56
CSTF3-206ENST00000524827 TAF1DQ9H5J8 278 aaPredicted RBP18.54■□□□□ 0.56
CSTF3-206ENST00000524827 CNTNAP1P78357 1384 aa18.54■□□□□ 0.56
CSTF3-206ENST00000524827 SNRPA1P09661 255 aaKnown RBP18.53■□□□□ 0.56
CSTF3-206ENST00000524827 ZNF541Q9H0D2 1346 aa18.52■□□□□ 0.56
CSTF3-206ENST00000524827 KLRG2A4D1S0 409 aaPredicted RBP18.52■□□□□ 0.56
CSTF3-206ENST00000524827 FKBP4Q02790 459 aaKnown RBP eCLIP18.52■□□□□ 0.56
CSTF3-206ENST00000524827 MCM10Q7L590 875 aa18.52■□□□□ 0.56
CSTF3-206ENST00000524827 CFAP53Q96M91 514 aa18.52■□□□□ 0.56
CSTF3-206ENST00000524827 ZNF277Q9NRM2 450 aaPredicted RBP18.52■□□□□ 0.56
CSTF3-206ENST00000524827 NBPF26B4DH59 902 aa18.51■□□□□ 0.55
CSTF3-206ENST00000524827 NBPF10Q6P3W6 841 aaKnown RBP18.51■□□□□ 0.55
CSTF3-206ENST00000524827 OLFM4Q6UX06 510 aa18.51■□□□□ 0.55
CSTF3-206ENST00000524827 NBPF15Q8N660 670 aa18.51■□□□□ 0.55
CSTF3-206ENST00000524827 NIP7Q9Y221 180 aaKnown RBP eCLIP18.51■□□□□ 0.55
CSTF3-206ENST00000524827 RGL2O15211 777 aa18.5■□□□□ 0.55
CSTF3-206ENST00000524827 FOXN1O15353 648 aa18.5■□□□□ 0.55
CSTF3-206ENST00000524827 TPTE2Q6XPS3 522 aa18.5■□□□□ 0.55
CSTF3-206ENST00000524827 RTF1Q92541 710 aaKnown RBP18.5■□□□□ 0.55
CSTF3-206ENST00000524827 FAM177BA6PVY3 158 aa18.49■□□□□ 0.55
CSTF3-206ENST00000524827 EAPPQ56P03 285 aaPredicted RBP18.49■□□□□ 0.55
CSTF3-206ENST00000524827 NUDCQ9Y266 331 aa18.49■□□□□ 0.55
CSTF3-206ENST00000524827 ADAMTSL1Q8N6G6 1762 aa18.49■□□□□ 0.55
CSTF3-206ENST00000524827 ITGBL1O95965 494 aaPredicted RBP18.48■□□□□ 0.55
CSTF3-206ENST00000524827 U2AF1L5P0DN76 240 aaPredicted RBP18.48■□□□□ 0.55
CSTF3-206ENST00000524827 U2AF1Q01081 240 aaKnown RBP eCLIP18.48■□□□□ 0.558e-37■■■■□ 22.1
CSTF3-206ENST00000524827 DCTN1Q14203 1278 aa18.48■□□□□ 0.55
CSTF3-206ENST00000524827 RTKN2Q8IZC4 609 aa18.48■□□□□ 0.55
CSTF3-206ENST00000524827 HACL1Q9UJ83 578 aa18.48■□□□□ 0.55
CSTF3-206ENST00000524827 TMEM88BA6NKF7 163 aa18.47■□□□□ 0.55
CSTF3-206ENST00000524827 LAMB4A4D0S4 1761 aa18.47■□□□□ 0.55
CSTF3-206ENST00000524827 EPHX2P34913 555 aa18.46■□□□□ 0.55
CSTF3-206ENST00000524827 IARSP41252 1262 aaKnown RBP18.46■□□□□ 0.55
CSTF3-206ENST00000524827 VEGFBP49765 207 aa18.46■□□□□ 0.55
CSTF3-206ENST00000524827 HLFQ16534 295 aa18.46■□□□□ 0.55
CSTF3-206ENST00000524827 CLEC11AQ9Y240 323 aa18.46■□□□□ 0.55
CSTF3-206ENST00000524827 SNED1Q8TER0 1413 aa18.46■□□□□ 0.55
CSTF3-206ENST00000524827 RNF123Q5XPI4 1314 aa18.46■□□□□ 0.55
CSTF3-206ENST00000524827 ABCC12Q96J65 1359 aa18.45■□□□□ 0.54
CSTF3-206ENST00000524827 FZD9O00144 591 aa18.45■□□□□ 0.54
CSTF3-206ENST00000524827 SYNE4Q8N205 404 aa18.45■□□□□ 0.54
CSTF3-206ENST00000524827 PRDM10Q9NQV6 1147 aa18.45■□□□□ 0.54
CSTF3-206ENST00000524827 HTATSF1O43719 755 aaKnown RBP18.44■□□□□ 0.54
CSTF3-206ENST00000524827 GTF2E1P29083 439 aaPredicted RBP18.44■□□□□ 0.54
CSTF3-206ENST00000524827 ALDH1B1P30837 517 aa18.44■□□□□ 0.54
CSTF3-206ENST00000524827 AIDAQ96BJ3 306 aa18.44■□□□□ 0.54
CSTF3-206ENST00000524827 PPP2R1AP30153 589 aa18.43■□□□□ 0.54
CSTF3-206ENST00000524827 CTCFP49711 727 aaPredicted RBP18.43■□□□□ 0.54
CSTF3-206ENST00000524827 TAF7Q15545 349 aaPredicted RBP18.43■□□□□ 0.54
CSTF3-206ENST00000524827 MAP1SQ66K74 1059 aaPredicted RBP18.43■□□□□ 0.54
CSTF3-206ENST00000524827 PNMA8AQ86V59 439 aaPredicted RBP18.43■□□□□ 0.54
CSTF3-206ENST00000524827 COL4A5P29400 1685 aa18.42■□□□□ 0.54
CSTF3-206ENST00000524827 CRY2Q49AN0 593 aa18.42■□□□□ 0.54
CSTF3-206ENST00000524827 NUTM1Q86Y26 1132 aa18.42■□□□□ 0.54
CSTF3-206ENST00000524827 CNTROBQ8N137 903 aa18.42■□□□□ 0.54
CSTF3-206ENST00000524827 GPC2Q8N158 579 aa18.42■□□□□ 0.54
CSTF3-206ENST00000524827 PSMD1Q99460 953 aa18.42■□□□□ 0.54
CSTF3-206ENST00000524827 MIS18AQ9NYP9 233 aa18.42■□□□□ 0.54
CSTF3-206ENST00000524827 NYXQ9GZU5 481 aa18.41■□□□□ 0.54
CSTF3-206ENST00000524827 WBP1LQ9NX94 342 aa18.41■□□□□ 0.54
CSTF3-206ENST00000524827 NUP98P52948 1817 aa18.41■□□□□ 0.54
CSTF3-206ENST00000524827 KDM3BQ7LBC6 1761 aa18.4■□□□□ 0.54
CSTF3-206ENST00000524827 RASSF10A6NK89 507 aa18.4■□□□□ 0.54
CSTF3-206ENST00000524827 NGEFQ8N5V2 710 aa18.4■□□□□ 0.54
CSTF3-206ENST00000524827 JDP2Q8WYK2 163 aa18.4■□□□□ 0.54
CSTF3-206ENST00000524827 ERVV-1B6SEH8 477 aa18.39■□□□□ 0.53
CSTF3-206ENST00000524827 DEFB115Q30KQ5 88 aa18.39■□□□□ 0.53
CSTF3-206ENST00000524827 LTBP1Q14766 1721 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms