RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 TSGA10IPQ3SY00 556 aa12.08□□□□□ -0.47
SPIDR-224ENST00000524126 CKAP2LQ8IYA6 745 aa12.08□□□□□ -0.47
SPIDR-224ENST00000524126 CDK19Q9BWU1 502 aa12.08□□□□□ -0.47
SPIDR-224ENST00000524126 EVC2Q86UK5 1308 aa12.08□□□□□ -0.48
SPIDR-224ENST00000524126 ZSCAN22P10073 491 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-224ENST00000524126 FBLN1P23142 703 aa12.08□□□□□ -0.48
SPIDR-224ENST00000524126 TYRO3Q06418 890 aa12.08□□□□□ -0.48
SPIDR-224ENST00000524126 SART3Q15020 963 aaKnown RBP12.08□□□□□ -0.48
SPIDR-224ENST00000524126 PLA2G4DQ86XP0 818 aa12.08□□□□□ -0.48
SPIDR-224ENST00000524126 TSPYL6Q8N831 410 aa12.08□□□□□ -0.48
SPIDR-224ENST00000524126 MYCBPQ99417 103 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-224ENST00000524126 SEC31AO94979 1220 aaKnown RBP12.07□□□□□ -0.48
SPIDR-224ENST00000524126 DNM1Q05193 864 aaKnown RBP12.07□□□□□ -0.48
SPIDR-224ENST00000524126 ANO6Q4KMQ2 910 aa12.07□□□□□ -0.48
SPIDR-224ENST00000524126 CT47A1Q5JQC4 288 aaPredicted RBP12.07□□□□□ -0.48
SPIDR-224ENST00000524126 TEX35Q5T0J7 233 aa12.07□□□□□ -0.48
SPIDR-224ENST00000524126 NYAP1Q6ZVC0 841 aa12.07□□□□□ -0.48
SPIDR-224ENST00000524126 NCAPGQ9BPX3 1015 aa12.07□□□□□ -0.48
SPIDR-224ENST00000524126 ADAMTS13Q76LX8 1427 aa12.07□□□□□ -0.48
SPIDR-224ENST00000524126 RAD50Q92878 1312 aa12.07□□□□□ -0.48
SPIDR-224ENST00000524126 RTL1A6NKG5 1358 aa12.07□□□□□ -0.48
SPIDR-224ENST00000524126 CLGNO14967 610 aa12.06□□□□□ -0.48
SPIDR-224ENST00000524126 F13A1P00488 732 aa12.06□□□□□ -0.48
SPIDR-224ENST00000524126 GUCY2CP25092 1073 aa12.06□□□□□ -0.48
SPIDR-224ENST00000524126 SRLQ86TD4 932 aa12.06□□□□□ -0.48
SPIDR-224ENST00000524126 CABP1Q9NZU7 370 aa12.06□□□□□ -0.48
SPIDR-224ENST00000524126 RRP15Q9Y3B9 282 aaKnown RBP12.06□□□□□ -0.48
SPIDR-224ENST00000524126 ROBO2Q9HCK4 1378 aa12.06□□□□□ -0.48
SPIDR-224ENST00000524126 RGS12O14924 1447 aa12.06□□□□□ -0.48
SPIDR-224ENST00000524126 SYT1P21579 422 aa12.06□□□□□ -0.48
SPIDR-224ENST00000524126 BRPF1P55201 1214 aaPredicted RBP12.06□□□□□ -0.48
SPIDR-224ENST00000524126 LMOD3Q0VAK6 560 aa12.06□□□□□ -0.48
SPIDR-224ENST00000524126 ARHGAP29Q52LW3 1261 aa12.06□□□□□ -0.48
SPIDR-224ENST00000524126 PACS2Q86VP3 889 aa12.06□□□□□ -0.48
SPIDR-224ENST00000524126 ANO2Q9NQ90 1003 aa12.06□□□□□ -0.48
SPIDR-224ENST00000524126 ABCC4O15439 1325 aa12.05□□□□□ -0.48
SPIDR-224ENST00000524126 CCDC171Q6TFL3 1326 aa12.05□□□□□ -0.48
SPIDR-224ENST00000524126 A0A1W2PP64 1363 aa12.05□□□□□ -0.48
SPIDR-224ENST00000524126 PIK3R4Q99570 1358 aa12.05□□□□□ -0.48
SPIDR-224ENST00000524126 PTPRUQ92729 1446 aa12.05□□□□□ -0.48
SPIDR-224ENST00000524126 STX6O43752 255 aa12.05□□□□□ -0.48
SPIDR-224ENST00000524126 LIG1P18858 919 aa12.05□□□□□ -0.48
SPIDR-224ENST00000524126 LRRC8AQ8IWT6 810 aa12.05□□□□□ -0.48
SPIDR-224ENST00000524126 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.05□□□□□ -0.48
SPIDR-224ENST00000524126 THUMPD2Q9BTF0 503 aaKnown RBP12.05□□□□□ -0.48
SPIDR-224ENST00000524126 IL16Q14005 1332 aa12.05□□□□□ -0.48
SPIDR-224ENST00000524126 PTCH1Q13635 1447 aa12.05□□□□□ -0.48
SPIDR-224ENST00000524126 HTATSF1O43719 755 aaKnown RBP12.05□□□□□ -0.48
SPIDR-224ENST00000524126 OAS2P29728 719 aaKnown RBP12.05□□□□□ -0.48
SPIDR-224ENST00000524126 GORABQ5T7V8 394 aa12.05□□□□□ -0.48
SPIDR-224ENST00000524126 GGNBP2Q9H3C7 697 aa12.05□□□□□ -0.48
SPIDR-224ENST00000524126 JRKLQ9Y4A0 524 aa12.05□□□□□ -0.48
SPIDR-224ENST00000524126 VAMP4O75379 141 aa12.04□□□□□ -0.48
SPIDR-224ENST00000524126 TPM4P67936 248 aa12.04□□□□□ -0.48
SPIDR-224ENST00000524126 MAP3K11Q16584 847 aa12.04□□□□□ -0.48
SPIDR-224ENST00000524126 CNPY4Q8N129 248 aa12.04□□□□□ -0.48
SPIDR-224ENST00000524126 ZRANB2O95218 330 aaKnown RBP eCLIP12.04□□□□□ -0.48
SPIDR-224ENST00000524126 SKILP12757 684 aa12.04□□□□□ -0.48
SPIDR-224ENST00000524126 CTR9Q6PD62 1173 aa12.04□□□□□ -0.48
SPIDR-224ENST00000524126 ESYT1Q9BSJ8 1104 aa12.04□□□□□ -0.48
SPIDR-224ENST00000524126 KRT24Q2M2I5 525 aa12.03□□□□□ -0.48
SPIDR-224ENST00000524126 BANK1Q8NDB2 785 aa12.03□□□□□ -0.48
SPIDR-224ENST00000524126 CCDC34Q96HJ3 373 aa12.03□□□□□ -0.48
SPIDR-224ENST00000524126 NUP62CLQ9H1M0 184 aa12.03□□□□□ -0.48
SPIDR-224ENST00000524126 MCCP23508 829 aa12.03□□□□□ -0.48
SPIDR-224ENST00000524126 E2F4Q16254 413 aa12.03□□□□□ -0.48
SPIDR-224ENST00000524126 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.03□□□□□ -0.483e-6■■■□□ 16.7
SPIDR-224ENST00000524126 DNAJC25Q9H1X3 360 aa12.03□□□□□ -0.48
SPIDR-224ENST00000524126 CD163L1Q9NR16 1453 aa12.02□□□□□ -0.48
SPIDR-224ENST00000524126 SASH3O75995 380 aa12.02□□□□□ -0.49
SPIDR-224ENST00000524126 RNF20Q5VTR2 975 aa12.02□□□□□ -0.49
SPIDR-224ENST00000524126 TMCO3Q6UWJ1 677 aa12.02□□□□□ -0.49
SPIDR-224ENST00000524126 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.02□□□□□ -0.49
SPIDR-224ENST00000524126 REXO1L1PQ8IX06 675 aa12.02□□□□□ -0.49
SPIDR-224ENST00000524126 CCAR2Q8N163 923 aaKnown RBP12.02□□□□□ -0.49
SPIDR-224ENST00000524126 EPC1Q9H2F5 836 aa12.02□□□□□ -0.49
SPIDR-224ENST00000524126 ZRANB1Q9UGI0 708 aa12.02□□□□□ -0.49
SPIDR-224ENST00000524126 LMAN1P49257 510 aa12.02□□□□□ -0.49
SPIDR-224ENST00000524126 FILIP1Q7Z7B0 1213 aa12.02□□□□□ -0.49
SPIDR-224ENST00000524126 FBXO18Q8NFZ0 1043 aa12.02□□□□□ -0.49
SPIDR-224ENST00000524126 CCDC69A6NI79 296 aa12.01□□□□□ -0.49
SPIDR-224ENST00000524126 CCZ1BP86790 482 aa12.01□□□□□ -0.49
SPIDR-224ENST00000524126 CCZ1P86791 482 aaPredicted RBP12.01□□□□□ -0.49
SPIDR-224ENST00000524126 TTC31Q49AM3 519 aaPredicted RBP12.01□□□□□ -0.49
SPIDR-224ENST00000524126 TDRD7Q8NHU6 1098 aaKnown RBP12.01□□□□□ -0.49
SPIDR-224ENST00000524126 BRMS1Q9HCU9 246 aa12.01□□□□□ -0.49
SPIDR-224ENST00000524126 CWC15Q9P013 229 aaKnown RBP12.01□□□□□ -0.49
SPIDR-224ENST00000524126 USP16Q9Y5T5 823 aa12.01□□□□□ -0.49
SPIDR-224ENST00000524126 A0A1B0GUL7 405 aa12.01□□□□□ -0.49
SPIDR-224ENST00000524126 ANKRD65E5RJM6 399 aa12.01□□□□□ -0.49
SPIDR-224ENST00000524126 FAM173BQ6P4H8 233 aa12.01□□□□□ -0.49
SPIDR-224ENST00000524126 FOXR1Q6PIV2 292 aa12.01□□□□□ -0.49
SPIDR-224ENST00000524126 ANKRD44Q8N8A2 993 aa12.01□□□□□ -0.49
SPIDR-224ENST00000524126 ARHGAP45Q92619 1136 aa12.01□□□□□ -0.49
SPIDR-224ENST00000524126 IL25Q9H293 177 aa12.01□□□□□ -0.49
SPIDR-224ENST00000524126 EID1Q9Y6B2 187 aa12.01□□□□□ -0.49
SPIDR-224ENST00000524126 PLEKHG2Q9H7P9 1386 aa12□□□□□ -0.49
SPIDR-224ENST00000524126 PRR36Q9H6K5 1346 aa12□□□□□ -0.49
SPIDR-224ENST00000524126 TNMDQ9H2S6 317 aa12□□□□□ -0.49
SPIDR-224ENST00000524126 AMOTL2Q9Y2J4 779 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms