RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 ZNF622Q969S3 477 aaKnown RBP eCLIP16.75■□□□□ 0.277e-7■□□□□ 8.7
TOP1MT-217ENST00000523417 MASTLQ96GX5 879 aa16.75■□□□□ 0.27
TOP1MT-217ENST00000523417 RRAGCQ9HB90 399 aa16.75■□□□□ 0.27
TOP1MT-217ENST00000523417 ERVV-1B6SEH8 477 aa16.74■□□□□ 0.27
TOP1MT-217ENST00000523417 C7orf43Q8WVR3 580 aa16.74■□□□□ 0.27
TOP1MT-217ENST00000523417 MIS18AQ9NYP9 233 aa16.74■□□□□ 0.27
TOP1MT-217ENST00000523417 C21orf2O43822 256 aa16.73■□□□□ 0.27
TOP1MT-217ENST00000523417 PIP4K2AP48426 406 aaPredicted RBP16.73■□□□□ 0.27
TOP1MT-217ENST00000523417 SOGA3Q5TF21 947 aa16.73■□□□□ 0.27
TOP1MT-217ENST00000523417 NBPF5PQ86XG9 351 aaPredicted RBP16.73■□□□□ 0.27
TOP1MT-217ENST00000523417 C16orf71Q8IYS4 520 aaPredicted RBP16.73■□□□□ 0.27
TOP1MT-217ENST00000523417 BABAM1Q9NWV8 329 aa16.73■□□□□ 0.27
TOP1MT-217ENST00000523417 CEP350Q5VT06 3117 aa16.73■□□□□ 0.27
TOP1MT-217ENST00000523417 SBF1O95248 1867 aa16.72■□□□□ 0.27
TOP1MT-217ENST00000523417 VEGFAP15692 232 aaPredicted RBP16.72■□□□□ 0.27
TOP1MT-217ENST00000523417 CCDC24Q8N4L8 307 aa16.72■□□□□ 0.27
TOP1MT-217ENST00000523417 SCN7AQ01118 1682 aa16.72■□□□□ 0.27
TOP1MT-217ENST00000523417 DLEC1Q9Y238 1755 aa16.72■□□□□ 0.27
TOP1MT-217ENST00000523417 DPY19L2Q6NUT2 758 aa16.71■□□□□ 0.27
TOP1MT-217ENST00000523417 NIP7Q9Y221 180 aaKnown RBP eCLIP16.71■□□□□ 0.27
TOP1MT-217ENST00000523417 NPHP1O15259 732 aa16.7■□□□□ 0.26
TOP1MT-217ENST00000523417 NPR1P16066 1061 aa16.7■□□□□ 0.26
TOP1MT-217ENST00000523417 HLFQ16534 295 aa16.7■□□□□ 0.26
TOP1MT-217ENST00000523417 PRPF40BQ6NWY9 871 aaKnown RBP16.7■□□□□ 0.26
TOP1MT-217ENST00000523417 ERBB4Q15303 1308 aa16.7■□□□□ 0.26
TOP1MT-217ENST00000523417 POTECB2RU33 542 aa16.69■□□□□ 0.26
TOP1MT-217ENST00000523417 SMC1BQ8NDV3 1235 aa16.69■□□□□ 0.26
TOP1MT-217ENST00000523417 MAPK8IP3Q9UPT6 1336 aa16.69■□□□□ 0.26
TOP1MT-217ENST00000523417 ANKRD31Q8N7Z5 1873 aa16.68■□□□□ 0.26
TOP1MT-217ENST00000523417 ALDH1B1P30837 517 aa16.68■□□□□ 0.26
TOP1MT-217ENST00000523417 TAOK3Q9H2K8 898 aa16.68■□□□□ 0.26
TOP1MT-217ENST00000523417 RIPK4P57078 832 aa16.67■□□□□ 0.26
TOP1MT-217ENST00000523417 ERFEQ4G0M1 354 aa16.67■□□□□ 0.26
TOP1MT-217ENST00000523417 THUMPD2Q9BTF0 503 aaKnown RBP16.67■□□□□ 0.26
TOP1MT-217ENST00000523417 NYXQ9GZU5 481 aa16.67■□□□□ 0.26
TOP1MT-217ENST00000523417 MAP3K15Q6ZN16 1313 aa16.67■□□□□ 0.26
TOP1MT-217ENST00000523417 CRY2Q49AN0 593 aa16.66■□□□□ 0.26
TOP1MT-217ENST00000523417 BCORQ6W2J9 1755 aa16.65■□□□□ 0.26
TOP1MT-217ENST00000523417 TMPOP42166 694 aaKnown RBP16.65■□□□□ 0.26
TOP1MT-217ENST00000523417 LMOD3Q0VAK6 560 aa16.65■□□□□ 0.26
TOP1MT-217ENST00000523417 LRP10Q7Z4F1 713 aa16.65■□□□□ 0.26
TOP1MT-217ENST00000523417 ZNF34Q8IZ26 560 aa16.65■□□□□ 0.26
TOP1MT-217ENST00000523417 RTKN2Q8IZC4 609 aa16.65■□□□□ 0.26
TOP1MT-217ENST00000523417 ZNF219Q9P2Y4 722 aaPredicted RBP16.65■□□□□ 0.26
TOP1MT-217ENST00000523417 RRP7AQ9Y3A4 280 aaKnown RBP16.65■□□□□ 0.26
TOP1MT-217ENST00000523417 HOXA10P31260 410 aaPredicted RBP16.64■□□□□ 0.25
TOP1MT-217ENST00000523417 PDIA6Q15084 440 aa16.64■□□□□ 0.25
TOP1MT-217ENST00000523417 CCDC93Q567U6 631 aa16.64■□□□□ 0.25
TOP1MT-217ENST00000523417 GIGYF2Q6Y7W6 1299 aaKnown RBP16.64■□□□□ 0.25
TOP1MT-217ENST00000523417 TTLL7Q6ZT98 887 aa16.64■□□□□ 0.25
TOP1MT-217ENST00000523417 JMYQ8N9B5 988 aa16.64■□□□□ 0.25
TOP1MT-217ENST00000523417 IBTKQ9P2D0 1353 aaPredicted RBP16.64■□□□□ 0.25
TOP1MT-217ENST00000523417 GTF2E1P29083 439 aaPredicted RBP16.63■□□□□ 0.25
TOP1MT-217ENST00000523417 FKBP4Q02790 459 aaKnown RBP eCLIP16.63■□□□□ 0.25
TOP1MT-217ENST00000523417 DDX10Q13206 875 aaKnown RBP16.63■□□□□ 0.25
TOP1MT-217ENST00000523417 KIF6Q6ZMV9 814 aa16.63■□□□□ 0.25
TOP1MT-217ENST00000523417 KLRG1Q96E93 195 aa16.63■□□□□ 0.25
TOP1MT-217ENST00000523417 TSPYL4Q9UJ04 414 aa16.63■□□□□ 0.25
TOP1MT-217ENST00000523417 MYBBP1AQ9BQG0 1328 aaKnown RBP16.63■□□□□ 0.25
TOP1MT-217ENST00000523417 TNRC6CQ9HCJ0 1690 aaKnown RBP16.62■□□□□ 0.25
TOP1MT-217ENST00000523417 RIC1Q4ADV7 1423 aa16.62■□□□□ 0.25
TOP1MT-217ENST00000523417 GRIPAP1Q4V328 841 aa16.62■□□□□ 0.25
TOP1MT-217ENST00000523417 IFFO2Q5TF58 517 aa16.62■□□□□ 0.25
TOP1MT-217ENST00000523417 CC2D2BQ6DHV5 1058 aa16.62■□□□□ 0.25
TOP1MT-217ENST00000523417 NGEFQ8N5V2 710 aa16.62■□□□□ 0.25
TOP1MT-217ENST00000523417 L3MBTL3Q96JM7 780 aaPredicted RBP16.62■□□□□ 0.25
TOP1MT-217ENST00000523417 FER1L6Q2WGJ9 1857 aa16.62■□□□□ 0.25
TOP1MT-217ENST00000523417 SLX4Q8IY92 1834 aa16.61■□□□□ 0.25
TOP1MT-217ENST00000523417 CHL1O00533 1208 aa16.61■□□□□ 0.25
TOP1MT-217ENST00000523417 MYL6BP14649 208 aa16.61■□□□□ 0.25
TOP1MT-217ENST00000523417 SLC10A5Q5PT55 438 aa16.61■□□□□ 0.25
TOP1MT-217ENST00000523417 KDM3BQ7LBC6 1761 aa16.61■□□□□ 0.25
TOP1MT-217ENST00000523417 COL11A2P13942 1736 aaPredicted RBP16.6■□□□□ 0.25
TOP1MT-217ENST00000523417 PARP10Q53GL7 1025 aa16.6■□□□□ 0.25
TOP1MT-217ENST00000523417 SUSD4Q5VX71 490 aa16.6■□□□□ 0.25
TOP1MT-217ENST00000523417 RUNDC1Q96C34 613 aa16.6■□□□□ 0.25
TOP1MT-217ENST00000523417 PSMD1Q99460 953 aa16.6■□□□□ 0.25
TOP1MT-217ENST00000523417 WDR90Q96KV7 1748 aa16.59■□□□□ 0.25
TOP1MT-217ENST00000523417 FAM177BA6PVY3 158 aa16.59■□□□□ 0.25
TOP1MT-217ENST00000523417 DDNO94850 711 aaPredicted RBP16.59■□□□□ 0.25
TOP1MT-217ENST00000523417 PPP1R42Q7Z4L9 355 aa16.59■□□□□ 0.25
TOP1MT-217ENST00000523417 CRAMP1Q96RY5 1269 aa16.59■□□□□ 0.25
TOP1MT-217ENST00000523417 UBN2Q6ZU65 1347 aa16.59■□□□□ 0.25
TOP1MT-217ENST00000523417 DLG5Q8TDM6 1919 aa16.58■□□□□ 0.25
TOP1MT-217ENST00000523417 FZD9O00144 591 aa16.58■□□□□ 0.24
TOP1MT-217ENST00000523417 NTSR2O95665 410 aa16.58■□□□□ 0.24
TOP1MT-217ENST00000523417 NUTM1Q86Y26 1132 aa16.58■□□□□ 0.24
TOP1MT-217ENST00000523417 ZBTB3Q9H5J0 574 aa16.58■□□□□ 0.24
TOP1MT-217ENST00000523417 TRIM35Q9UPQ4 493 aa16.58■□□□□ 0.24
TOP1MT-217ENST00000523417 SNED1Q8TER0 1413 aa16.57■□□□□ 0.24
TOP1MT-217ENST00000523417 RNF123Q5XPI4 1314 aa16.57■□□□□ 0.24
TOP1MT-217ENST00000523417 IQCA1LA6NCM1 817 aa16.57■□□□□ 0.24
TOP1MT-217ENST00000523417 CHADLQ6NUI6 762 aa16.57■□□□□ 0.24
TOP1MT-217ENST00000523417 SYNE4Q8N205 404 aa16.57■□□□□ 0.24
TOP1MT-217ENST00000523417 DICER1Q9UPY3 1922 aaKnown RBP16.57■□□□□ 0.24
TOP1MT-217ENST00000523417 LAMB4A4D0S4 1761 aa16.56■□□□□ 0.24
TOP1MT-217ENST00000523417 ABCC12Q96J65 1359 aa16.56■□□□□ 0.24
TOP1MT-217ENST00000523417 HOXB7P09629 217 aa16.56■□□□□ 0.24
TOP1MT-217ENST00000523417 EIF2S2P20042 333 aaKnown RBP16.56■□□□□ 0.24
TOP1MT-217ENST00000523417 GPTP24298 496 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms