RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 HSPA1BP0DMV9 641 aaKnown RBP30.56■■■□□ 2.48
PVT1-218ENST00000523328 STYK1Q6J9G0 422 aa30.56■■■□□ 2.48
PVT1-218ENST00000523328 NPM2Q86SE8 214 aaKnown RBP30.56■■■□□ 2.48
PVT1-218ENST00000523328 TNS4Q8IZW8 715 aa30.56■■■□□ 2.48
PVT1-218ENST00000523328 ST5P78524 1137 aa30.55■■■□□ 2.48
PVT1-218ENST00000523328 PRPF40BQ6NWY9 871 aaKnown RBP30.55■■■□□ 2.48
PVT1-218ENST00000523328 DZIP3Q86Y13 1208 aaKnown RBP30.55■■■□□ 2.48
PVT1-218ENST00000523328 USP16Q9Y5T5 823 aa30.55■■■□□ 2.48
PVT1-218ENST00000523328 RSPH6AQ9H0K4 717 aa30.54■■■□□ 2.48
PVT1-218ENST00000523328 NPHP1O15259 732 aa30.53■■■□□ 2.48
PVT1-218ENST00000523328 PRKAR2BP31323 418 aa30.53■■■□□ 2.48
PVT1-218ENST00000523328 MASTLQ96GX5 879 aa30.53■■■□□ 2.48
PVT1-218ENST00000523328 DDNO94850 711 aaPredicted RBP30.52■■■□□ 2.48
PVT1-218ENST00000523328 PIP4K2AP48426 406 aaPredicted RBP30.52■■■□□ 2.48
PVT1-218ENST00000523328 PRAMEF22A3QJZ6 481 aa30.51■■■□□ 2.47
PVT1-218ENST00000523328 POTEIP0CG38 1075 aa30.51■■■□□ 2.47
PVT1-218ENST00000523328 POTEJP0CG39 1038 aa30.51■■■□□ 2.47
PVT1-218ENST00000523328 CHADLQ6NUI6 762 aa30.51■■■□□ 2.47
PVT1-218ENST00000523328 CAPN15O75808 1086 aa30.5■■■□□ 2.47
PVT1-218ENST00000523328 SOGA3Q5TF21 947 aa30.5■■■□□ 2.47
PVT1-218ENST00000523328 CLEC4GQ6UXB4 293 aa30.49■■■□□ 2.47
PVT1-218ENST00000523328 C7orf43Q8WVR3 580 aa30.49■■■□□ 2.47
PVT1-218ENST00000523328 SCN4AP35499 1836 aa30.48■■■□□ 2.47
PVT1-218ENST00000523328 CREBZFQ9NS37 354 aa30.48■■■□□ 2.47
PVT1-218ENST00000523328 NBPF5PQ86XG9 351 aaPredicted RBP30.47■■■□□ 2.47
PVT1-218ENST00000523328 SNRPA1P09661 255 aaKnown RBP30.45■■■□□ 2.47
PVT1-218ENST00000523328 KLRG2A4D1S0 409 aaPredicted RBP30.44■■■□□ 2.46
PVT1-218ENST00000523328 L3MBTL3Q96JM7 780 aaPredicted RBP30.44■■■□□ 2.46
PVT1-218ENST00000523328 CFAP53Q96M91 514 aa30.44■■■□□ 2.46
PVT1-218ENST00000523328 ZNF652Q9Y2D9 606 aa30.44■■■□□ 2.46
PVT1-218ENST00000523328 CCDC93Q567U6 631 aa30.43■■■□□ 2.46
PVT1-218ENST00000523328 MCM10Q7L590 875 aa30.43■■■□□ 2.46
PVT1-218ENST00000523328 NBPF26B4DH59 902 aa30.42■■■□□ 2.46
PVT1-218ENST00000523328 NPR1P16066 1061 aa30.42■■■□□ 2.46
PVT1-218ENST00000523328 NBPF10Q6P3W6 841 aaKnown RBP30.42■■■□□ 2.46
PVT1-218ENST00000523328 NBPF15Q8N660 670 aa30.42■■■□□ 2.46
PVT1-218ENST00000523328 MKRN1Q9UHC7 482 aaKnown RBP30.42■■■□□ 2.46
PVT1-218ENST00000523328 IQCA1LA6NCM1 817 aa30.41■■■□□ 2.46
PVT1-218ENST00000523328 RGL2O15211 777 aa30.4■■■□□ 2.46
PVT1-218ENST00000523328 RTF1Q92541 710 aaKnown RBP30.4■■■□□ 2.46
PVT1-218ENST00000523328 TAF1DQ9H5J8 278 aaPredicted RBP30.4■■■□□ 2.46
PVT1-218ENST00000523328 NUDCQ9Y266 331 aa30.4■■■□□ 2.46
PVT1-218ENST00000523328 PASKQ96RG2 1323 aa30.4■■■□□ 2.46
PVT1-218ENST00000523328 FKBP4Q02790 459 aaKnown RBP eCLIP30.39■■■□□ 2.46
PVT1-218ENST00000523328 TPTE2Q6XPS3 522 aa30.39■■■□□ 2.46
PVT1-218ENST00000523328 LDHDQ86WU2 507 aa30.39■■■□□ 2.46
PVT1-218ENST00000523328 NIP7Q9Y221 180 aaKnown RBP eCLIP30.39■■■□□ 2.46
PVT1-218ENST00000523328 U2AF1L5P0DN76 240 aaPredicted RBP30.38■■■□□ 2.45
PVT1-218ENST00000523328 U2AF1Q01081 240 aaKnown RBP eCLIP30.38■■■□□ 2.45
PVT1-218ENST00000523328 DCTN1Q14203 1278 aa30.38■■■□□ 2.45
PVT1-218ENST00000523328 OLFM4Q6UX06 510 aa30.38■■■□□ 2.45
PVT1-218ENST00000523328 ZNF541Q9H0D2 1346 aa30.37■■■□□ 2.45
PVT1-218ENST00000523328 CNTNAP1P78357 1384 aa30.37■■■□□ 2.45
PVT1-218ENST00000523328 LAMB4A4D0S4 1761 aa30.36■■■□□ 2.45
PVT1-218ENST00000523328 ZNF277Q9NRM2 450 aaPredicted RBP30.36■■■□□ 2.45
PVT1-218ENST00000523328 ADAMTSL1Q8N6G6 1762 aa30.36■■■□□ 2.45
PVT1-218ENST00000523328 HTATSF1O43719 755 aaKnown RBP30.34■■■□□ 2.45
PVT1-218ENST00000523328 HLFQ16534 295 aa30.34■■■□□ 2.45
PVT1-218ENST00000523328 FAM177BA6PVY3 158 aa30.33■■■□□ 2.45
PVT1-218ENST00000523328 ITGBL1O95965 494 aaPredicted RBP30.33■■■□□ 2.45
PVT1-218ENST00000523328 PPP2R1AP30153 589 aa30.33■■■□□ 2.45
PVT1-218ENST00000523328 RTKN2Q8IZC4 609 aa30.33■■■□□ 2.45
PVT1-218ENST00000523328 SNED1Q8TER0 1413 aa30.31■■■□□ 2.44
PVT1-218ENST00000523328 NUP98P52948 1817 aa30.31■■■□□ 2.44
PVT1-218ENST00000523328 DLG5Q8TDM6 1919 aa30.3■■■□□ 2.44
PVT1-218ENST00000523328 ALDH1B1P30837 517 aa30.3■■■□□ 2.44
PVT1-218ENST00000523328 TAF7Q15545 349 aaPredicted RBP30.3■■■□□ 2.44
PVT1-218ENST00000523328 HACL1Q9UJ83 578 aa30.3■■■□□ 2.44
PVT1-218ENST00000523328 FZD9O00144 591 aa30.29■■■□□ 2.44
PVT1-218ENST00000523328 FOXN1O15353 648 aa30.29■■■□□ 2.44
PVT1-218ENST00000523328 EAPPQ56P03 285 aaPredicted RBP30.29■■■□□ 2.44
PVT1-218ENST00000523328 KDM3BQ7LBC6 1761 aa30.28■■■□□ 2.44
PVT1-218ENST00000523328 TMEM88BA6NKF7 163 aa30.28■■■□□ 2.44
PVT1-218ENST00000523328 IARSP41252 1262 aaKnown RBP30.28■■■□□ 2.44
PVT1-218ENST00000523328 MIS18AQ9NYP9 233 aa30.28■■■□□ 2.44
PVT1-218ENST00000523328 EPHX2P34913 555 aa30.27■■■□□ 2.44
PVT1-218ENST00000523328 CRY2Q49AN0 593 aa30.27■■■□□ 2.44
PVT1-218ENST00000523328 SYNE4Q8N205 404 aa30.27■■■□□ 2.44
PVT1-218ENST00000523328 ABCC12Q96J65 1359 aa30.27■■■□□ 2.44
PVT1-218ENST00000523328 RNF123Q5XPI4 1314 aa30.26■■■□□ 2.44
PVT1-218ENST00000523328 VEGFBP49765 207 aa30.26■■■□□ 2.43
PVT1-218ENST00000523328 GTF2E1P29083 439 aaPredicted RBP30.25■■■□□ 2.43
PVT1-218ENST00000523328 PSMD1Q99460 953 aa30.24■■■□□ 2.43
PVT1-218ENST00000523328 CLEC11AQ9Y240 323 aa30.24■■■□□ 2.43
PVT1-218ENST00000523328 COL4A5P29400 1685 aa30.23■■■□□ 2.43
PVT1-218ENST00000523328 ERVV-1B6SEH8 477 aa30.23■■■□□ 2.43
PVT1-218ENST00000523328 PNMA8AQ86V59 439 aaPredicted RBP30.23■■■□□ 2.43
PVT1-218ENST00000523328 NUTM1Q86Y26 1132 aa30.23■■■□□ 2.43
PVT1-218ENST00000523328 GPC2Q8N158 579 aa30.23■■■□□ 2.43
PVT1-218ENST00000523328 NYXQ9GZU5 481 aa30.22■■■□□ 2.43
PVT1-218ENST00000523328 PRDM10Q9NQV6 1147 aa30.22■■■□□ 2.43
PVT1-218ENST00000523328 MAP1SQ66K74 1059 aaPredicted RBP30.21■■■□□ 2.43
PVT1-218ENST00000523328 NGEFQ8N5V2 710 aa30.21■■■□□ 2.43
PVT1-218ENST00000523328 RIC1Q4ADV7 1423 aa30.21■■■□□ 2.43
PVT1-218ENST00000523328 MAP3K15Q6ZN16 1313 aa30.21■■■□□ 2.43
PVT1-218ENST00000523328 LTBP1Q14766 1721 aa30.2■■■□□ 2.43
PVT1-218ENST00000523328 CNTROBQ8N137 903 aa30.2■■■□□ 2.43
PVT1-218ENST00000523328 TTLL7Q6ZT98 887 aa30.19■■■□□ 2.42
PVT1-218ENST00000523328 IBTKQ9P2D0 1353 aaPredicted RBP30.18■■■□□ 2.42
PVT1-218ENST00000523328 CTCFP49711 727 aaPredicted RBP30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms