RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 EXOC5O00471 708 aa13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 ALDH1L1O75891 902 aa13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 FER1L4A9Z1Z3 1794 aa13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 GRM8O00222 908 aa13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 GSPT1P15170 499 aaKnown RBP13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 CHMLP26374 656 aa13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 ANAPC15P60006 121 aa13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 CWF19L2Q2TBE0 894 aaKnown RBP13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 R3HCC1Q9Y3T6 440 aaKnown RBP13.39□□□□□ -0.27
PCDHGB4-201ENST00000519479 NEXMIFQ5QGS0 1516 aa13.38□□□□□ -0.27
PCDHGB4-201ENST00000519479 CEP170BQ9Y4F5 1589 aaPredicted RBP13.38□□□□□ -0.27
PCDHGB4-201ENST00000519479 AKAP17AQ02040 695 aaKnown RBP13.38□□□□□ -0.27
PCDHGB4-201ENST00000519479 ANKRD13DQ6ZTN6 518 aa13.38□□□□□ -0.27
PCDHGB4-201ENST00000519479 COPS6Q7L5N1 327 aa13.38□□□□□ -0.27
PCDHGB4-201ENST00000519479 XAGE3Q8WTP9 111 aa13.38□□□□□ -0.27
PCDHGB4-201ENST00000519479 SH2B1Q9NRF2 756 aaPredicted RBP13.38□□□□□ -0.27
PCDHGB4-201ENST00000519479 TULP4Q9NRJ4 1543 aa13.38□□□□□ -0.27
PCDHGB4-201ENST00000519479 KIF24Q5T7B8 1368 aa13.38□□□□□ -0.27
PCDHGB4-201ENST00000519479 SNRPA1P09661 255 aaKnown RBP13.37□□□□□ -0.27
PCDHGB4-201ENST00000519479 RTL1A6NKG5 1358 aa13.37□□□□□ -0.27
PCDHGB4-201ENST00000519479 IQGAP1P46940 1657 aa13.37□□□□□ -0.27
PCDHGB4-201ENST00000519479 NBPF6Q5VWK0 638 aa13.37□□□□□ -0.27
PCDHGB4-201ENST00000519479 IL17REQ8NFR9 667 aa13.37□□□□□ -0.27
PCDHGB4-201ENST00000519479 LINS1Q8NG48 757 aa13.37□□□□□ -0.27
PCDHGB4-201ENST00000519479 NBPF4Q96M43 638 aa13.37□□□□□ -0.27
PCDHGB4-201ENST00000519479 SDF4Q9BRK5 362 aa13.37□□□□□ -0.27
PCDHGB4-201ENST00000519479 BABAM1Q9NWV8 329 aa13.37□□□□□ -0.27
PCDHGB4-201ENST00000519479 RBM27Q9P2N5 1060 aaKnown RBP13.37□□□□□ -0.27
PCDHGB4-201ENST00000519479 TBC1D2BQ9UPU7 963 aa13.37□□□□□ -0.27
PCDHGB4-201ENST00000519479 ADGRL3Q9HAR2 1447 aa13.37□□□□□ -0.27
PCDHGB4-201ENST00000519479 VPS37DQ86XT2 251 aa13.37□□□□□ -0.27
PCDHGB4-201ENST00000519479 A0A0U1RQG5 324 aaPredicted RBP13.37□□□□□ -0.27
PCDHGB4-201ENST00000519479 PTCH1Q13635 1447 aa13.37□□□□□ -0.27
PCDHGB4-201ENST00000519479 DLC1Q96QB1 1528 aa13.37□□□□□ -0.27
PCDHGB4-201ENST00000519479 RNMTO43148 476 aaKnown RBP13.36□□□□□ -0.27
PCDHGB4-201ENST00000519479 PIP4K2AP48426 406 aaPredicted RBP13.36□□□□□ -0.27
PCDHGB4-201ENST00000519479 DDX11Q96FC9 970 aa13.36□□□□□ -0.27
PCDHGB4-201ENST00000519479 ZBTB3Q9H5J0 574 aa13.36□□□□□ -0.27
PCDHGB4-201ENST00000519479 CCDC192P0DO97 292 aa13.36□□□□□ -0.27
PCDHGB4-201ENST00000519479 NFATC2IPQ8NCF5 419 aa13.36□□□□□ -0.27
PCDHGB4-201ENST00000519479 FAM13BQ9NYF5 915 aa13.36□□□□□ -0.27
PCDHGB4-201ENST00000519479 KDM4AO75164 1064 aa13.35□□□□□ -0.27
PCDHGB4-201ENST00000519479 SF3B2Q13435 895 aaKnown RBP13.35□□□□□ -0.27
PCDHGB4-201ENST00000519479 SIRT2Q8IXJ6 389 aa13.35□□□□□ -0.27
PCDHGB4-201ENST00000519479 CABLES1Q8TDN4 633 aa13.35□□□□□ -0.27
PCDHGB4-201ENST00000519479 SPATA32Q96LK8 384 aa13.35□□□□□ -0.27
PCDHGB4-201ENST00000519479 CDCA7Q9BWT1 371 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB4-201ENST00000519479 CDK12Q9NYV4 1490 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB4-201ENST00000519479 STX6O43752 255 aa13.35□□□□□ -0.27
PCDHGB4-201ENST00000519479 USP6P35125 1406 aa13.35□□□□□ -0.27
PCDHGB4-201ENST00000519479 TRIM5Q9C035 493 aa13.35□□□□□ -0.27
PCDHGB4-201ENST00000519479 TNMDQ9H2S6 317 aa13.35□□□□□ -0.27
PCDHGB4-201ENST00000519479 ZNF335Q9H4Z2 1342 aaPredicted RBP13.34□□□□□ -0.27
PCDHGB4-201ENST00000519479 KINO60870 393 aaKnown RBP13.34□□□□□ -0.27
PCDHGB4-201ENST00000519479 NBPF7P0C2Y1 421 aaPredicted RBP13.34□□□□□ -0.27
PCDHGB4-201ENST00000519479 ZSCAN23Q3MJ62 389 aa13.34□□□□□ -0.27
PCDHGB4-201ENST00000519479 ZSCAN30Q86W11 494 aa13.34□□□□□ -0.27
PCDHGB4-201ENST00000519479 TMOD3Q9NYL9 352 aa13.34□□□□□ -0.27
PCDHGB4-201ENST00000519479 PNPLA6Q8IY17 1366 aa13.34□□□□□ -0.27
PCDHGB4-201ENST00000519479 DHX16O60231 1041 aaKnown RBP13.34□□□□□ -0.27
PCDHGB4-201ENST00000519479 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.34□□□□□ -0.27
PCDHGB4-201ENST00000519479 ERICH2A1L162 156 aa13.34□□□□□ -0.27
PCDHGB4-201ENST00000519479 PODXL2Q9NZ53 605 aa13.34□□□□□ -0.27
PCDHGB4-201ENST00000519479 MROH1Q8NDA8 1641 aa13.34□□□□□ -0.27
PCDHGB4-201ENST00000519479 GJB2P29033 226 aa13.34□□□□□ -0.27
PCDHGB4-201ENST00000519479 RASSF8Q8NHQ8 419 aa13.34□□□□□ -0.27
PCDHGB4-201ENST00000519479 IFIT1P09914 478 aaKnown RBP13.33□□□□□ -0.28
PCDHGB4-201ENST00000519479 KIAA1210Q9ULL0 1709 aa13.33□□□□□ -0.28
PCDHGB4-201ENST00000519479 PDIA4P13667 645 aaKnown RBP13.33□□□□□ -0.28
PCDHGB4-201ENST00000519479 UBE2Q2Q8WVN8 375 aa13.33□□□□□ -0.28
PCDHGB4-201ENST00000519479 KIF13AQ9H1H9 1805 aa13.33□□□□□ -0.28
PCDHGB4-201ENST00000519479 DIP2AQ14689 1571 aa13.33□□□□□ -0.28
PCDHGB4-201ENST00000519479 STARD3NLO95772 234 aa13.33□□□□□ -0.28
PCDHGB4-201ENST00000519479 HOXB7P09629 217 aa13.33□□□□□ -0.28
PCDHGB4-201ENST00000519479 SPC24Q8NBT2 197 aa13.33□□□□□ -0.28
PCDHGB4-201ENST00000519479 ZNF396Q96N95 335 aaPredicted RBP13.33□□□□□ -0.28
PCDHGB4-201ENST00000519479 USP44Q9H0E7 712 aa13.33□□□□□ -0.28
PCDHGB4-201ENST00000519479 NRXN1Q9ULB1 1477 aa13.33□□□□□ -0.28
PCDHGB4-201ENST00000519479 TTC41PQ6P2S7 1318 aa13.33□□□□□ -0.28
PCDHGB4-201ENST00000519479 NUP62CLQ9H1M0 184 aa13.32□□□□□ -0.28
PCDHGB4-201ENST00000519479 EIF4A1P60842 406 aaKnown RBP13.32□□□□□ -0.28
PCDHGB4-201ENST00000519479 ZNF592Q92610 1267 aa13.32□□□□□ -0.28
PCDHGB4-201ENST00000519479 TCEANC2Q96MN5 208 aa13.32□□□□□ -0.28
PCDHGB4-201ENST00000519479 CTNNA3Q9UI47 895 aa13.32□□□□□ -0.28
PCDHGB4-201ENST00000519479 SAFBQ15424 915 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCDHGB4-201ENST00000519479 CREBRFQ8IUR6 639 aa13.32□□□□□ -0.28
PCDHGB4-201ENST00000519479 DDX21Q9NR30 783 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCDHGB4-201ENST00000519479 RBM8AQ9Y5S9 174 aaKnown RBP13.32□□□□□ -0.28
PCDHGB4-201ENST00000519479 ME1P48163 572 aa13.32□□□□□ -0.28
PCDHGB4-201ENST00000519479 CCDC183Q5T5S1 534 aa13.32□□□□□ -0.28
PCDHGB4-201ENST00000519479 ZCRB1Q8TBF4 217 aaKnown RBP13.32□□□□□ -0.28
PCDHGB4-201ENST00000519479 IGSF1Q8N6C5 1336 aa13.31□□□□□ -0.28
PCDHGB4-201ENST00000519479 GOLIM4O00461 696 aa13.31□□□□□ -0.28
PCDHGB4-201ENST00000519479 STK38Q15208 465 aa13.31□□□□□ -0.28
PCDHGB4-201ENST00000519479 NECAB1Q8N987 351 aa13.31□□□□□ -0.28
PCDHGB4-201ENST00000519479 IL2RBP14784 551 aa13.31□□□□□ -0.28
PCDHGB4-201ENST00000519479 CWC25Q9NXE8 425 aaPredicted RBP13.31□□□□□ -0.28
PCDHGB4-201ENST00000519479 U3KPZ7 1027 aaPredicted RBP13.31□□□□□ -0.28
PCDHGB4-201ENST00000519479 KCNQ3O43525 872 aa13.31□□□□□ -0.28
PCDHGB4-201ENST00000519479 TNNT3P45378 269 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms