RNA–Protein interactions for RNA: ENST00000518855.5

CLINT1-202, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 3,394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-202ENST00000518855 SMAP1Q8IYB5 467 aaPredicted RBP6.3□□□□□ -1.4
CLINT1-202ENST00000518855 GPT2Q8TD30 523 aa6.3□□□□□ -1.4
CLINT1-202ENST00000518855 MBIPQ9NS73 344 aa6.3□□□□□ -1.4
CLINT1-202ENST00000518855 CCDC39Q9UFE4 941 aa6.3□□□□□ -1.4
CLINT1-202ENST00000518855 UTP14CQ5TAP6 766 aaKnown RBP6.29□□□□□ -1.4
CLINT1-202ENST00000518855 TMEM132EQ6IEE7 984 aa6.29□□□□□ -1.4
CLINT1-202ENST00000518855 KIAA1211Q6ZU35 1233 aa6.29□□□□□ -1.4
CLINT1-202ENST00000518855 FAM184AQ8NB25 1140 aa6.29□□□□□ -1.4
CLINT1-202ENST00000518855 STAP2Q9UGK3 403 aa6.29□□□□□ -1.4
CLINT1-202ENST00000518855 MRC1P22897 1456 aa6.29□□□□□ -1.4
CLINT1-202ENST00000518855 CHL1O00533 1208 aa6.29□□□□□ -1.4
CLINT1-202ENST00000518855 NEUROD2Q15784 382 aa6.29□□□□□ -1.4
CLINT1-202ENST00000518855 CEP85Q6P2H3 762 aa6.29□□□□□ -1.4
CLINT1-202ENST00000518855 SPTLC3Q9NUV7 552 aa6.29□□□□□ -1.4
CLINT1-202ENST00000518855 PRDM4Q9UKN5 801 aa6.29□□□□□ -1.4
CLINT1-202ENST00000518855 TK2O00142 265 aa6.29□□□□□ -1.4
CLINT1-202ENST00000518855 REC8O95072 547 aa6.29□□□□□ -1.4
CLINT1-202ENST00000518855 RBSNQ9H1K0 784 aa6.29□□□□□ -1.4
CLINT1-202ENST00000518855 CAMK2BQ13554 666 aa6.28□□□□□ -1.4
CLINT1-202ENST00000518855 IDI1Q13907 227 aa6.28□□□□□ -1.4
CLINT1-202ENST00000518855 ANKRD45Q5TZF3 282 aa6.28□□□□□ -1.4
CLINT1-202ENST00000518855 SPRYD3Q8NCJ5 442 aa6.28□□□□□ -1.4
CLINT1-202ENST00000518855 KCTD12Q96CX2 325 aaKnown RBP6.28□□□□□ -1.4
CLINT1-202ENST00000518855 GZF1Q9H116 711 aaPredicted RBP6.28□□□□□ -1.4
CLINT1-202ENST00000518855 TCHHQ07283 1943 aa6.28□□□□□ -1.4
CLINT1-202ENST00000518855 PRKAR2BP31323 418 aa6.28□□□□□ -1.4
CLINT1-202ENST00000518855 SASS6Q6UVJ0 657 aa6.28□□□□□ -1.4
CLINT1-202ENST00000518855 VSIG10Q8N0Z9 540 aa6.28□□□□□ -1.4
CLINT1-202ENST00000518855 ANP32BQ92688 251 aaKnown RBP6.28□□□□□ -1.4
CLINT1-202ENST00000518855 ZDHHC16Q969W1 377 aa6.28□□□□□ -1.4
CLINT1-202ENST00000518855 PRIMPOLQ96LW4 560 aa6.28□□□□□ -1.4
CLINT1-202ENST00000518855 BABAM1Q9NWV8 329 aa6.28□□□□□ -1.4
CLINT1-202ENST00000518855 DDX49Q9Y6V7 483 aaKnown RBP6.28□□□□□ -1.4
CLINT1-202ENST00000518855 MSH6P52701 1360 aa6.28□□□□□ -1.4
CLINT1-202ENST00000518855 HMGN5P82970 282 aaKnown RBP6.27□□□□□ -1.4
CLINT1-202ENST00000518855 TWISTNBQ3B726 338 aaPredicted RBP6.27□□□□□ -1.4
CLINT1-202ENST00000518855 USP42Q9H9J4 1324 aaKnown RBP6.27□□□□□ -1.41
CLINT1-202ENST00000518855 MSNP26038 577 aaKnown RBP6.27□□□□□ -1.41
CLINT1-202ENST00000518855 ZBED2Q9BTP6 218 aa6.27□□□□□ -1.41
CLINT1-202ENST00000518855 GGNBP2Q9H3C7 697 aa6.27□□□□□ -1.41
CLINT1-202ENST00000518855 ERC2O15083 957 aa6.27□□□□□ -1.41
CLINT1-202ENST00000518855 SDSP20132 328 aa6.27□□□□□ -1.41
CLINT1-202ENST00000518855 COL9A1P20849 921 aa6.27□□□□□ -1.41
CLINT1-202ENST00000518855 PTPREP23469 700 aa6.27□□□□□ -1.41
CLINT1-202ENST00000518855 CASC1Q6TDU7 716 aa6.27□□□□□ -1.41
CLINT1-202ENST00000518855 TSPYL6Q8N831 410 aa6.27□□□□□ -1.41
CLINT1-202ENST00000518855 PHACTR3Q96KR7 559 aa6.27□□□□□ -1.41
CLINT1-202ENST00000518855 CDK19Q9BWU1 502 aa6.27□□□□□ -1.41
CLINT1-202ENST00000518855 SLIT1O75093 1534 aa6.27□□□□□ -1.41
CLINT1-202ENST00000518855 LETM1O95202 739 aaPredicted RBP6.26□□□□□ -1.41
CLINT1-202ENST00000518855 PROX2Q3B8N5 592 aa6.26□□□□□ -1.41
CLINT1-202ENST00000518855 MYRIPQ8NFW9 859 aa6.26□□□□□ -1.41
CLINT1-202ENST00000518855 KCNB2Q92953 911 aa6.26□□□□□ -1.41
CLINT1-202ENST00000518855 TMEM63CQ9P1W3 806 aa6.26□□□□□ -1.41
CLINT1-202ENST00000518855 TTC21BQ7Z4L5 1316 aa6.26□□□□□ -1.41
CLINT1-202ENST00000518855 OVOS2A0A0G2JMS6 1433 aa6.26□□□□□ -1.41
CLINT1-202ENST00000518855 ABCC6O95255 1503 aa6.26□□□□□ -1.41
CLINT1-202ENST00000518855 CCDC171Q6TFL3 1326 aa6.26□□□□□ -1.41
CLINT1-202ENST00000518855 HTATSF1O43719 755 aaKnown RBP6.26□□□□□ -1.41
CLINT1-202ENST00000518855 PRIM1P49642 420 aaKnown RBP6.26□□□□□ -1.41
CLINT1-202ENST00000518855 SYCP1Q15431 976 aa6.26□□□□□ -1.41
CLINT1-202ENST00000518855 DDX12PQ92771 950 aa6.26□□□□□ -1.41
CLINT1-202ENST00000518855 PRAM1Q96QH2 718 aa6.26□□□□□ -1.41
CLINT1-202ENST00000518855 NCAPD2Q15021 1401 aa6.26□□□□□ -1.41
CLINT1-202ENST00000518855 PHF14O94880 888 aa6.26□□□□□ -1.41
CLINT1-202ENST00000518855 C8orf58Q8NAV2 365 aa6.26□□□□□ -1.41
CLINT1-202ENST00000518855 FUCA2Q9BTY2 467 aa6.26□□□□□ -1.41
CLINT1-202ENST00000518855 SRCIN1Q9C0H9 1055 aa6.26□□□□□ -1.41
CLINT1-202ENST00000518855 JCADQ9P266 1359 aa6.25□□□□□ -1.41
CLINT1-202ENST00000518855 BHMG1C9JSJ3 638 aaPredicted RBP6.25□□□□□ -1.41
CLINT1-202ENST00000518855 U2SURPO15042 1029 aaKnown RBP6.25□□□□□ -1.41
CLINT1-202ENST00000518855 TNNT2P45379 298 aaPredicted RBP6.25□□□□□ -1.41
CLINT1-202ENST00000518855 PIBF1Q8WXW3 757 aa6.25□□□□□ -1.41
CLINT1-202ENST00000518855 USP25Q9UHP3 1055 aa6.25□□□□□ -1.41
CLINT1-202ENST00000518855 USP6P35125 1406 aa6.25□□□□□ -1.41
CLINT1-202ENST00000518855 LTN1O94822 1766 aa6.25□□□□□ -1.41
CLINT1-202ENST00000518855 SYAP1Q96A49 352 aaPredicted RBP6.25□□□□□ -1.41
CLINT1-202ENST00000518855 SNRKQ9NRH2 765 aa6.25□□□□□ -1.41
CLINT1-202ENST00000518855 COL22A1Q8NFW1 1626 aaPredicted RBP6.25□□□□□ -1.41
CLINT1-202ENST00000518855 CCT4P50991 539 aaKnown RBP6.24□□□□□ -1.41
CLINT1-202ENST00000518855 MCTP1Q6DN14 999 aa6.24□□□□□ -1.41
CLINT1-202ENST00000518855 ESYT1Q9BSJ8 1104 aa6.24□□□□□ -1.41
CLINT1-202ENST00000518855 WASLO00401 505 aaPredicted RBP6.24□□□□□ -1.41
CLINT1-202ENST00000518855 TPM3P06753 285 aa6.24□□□□□ -1.41
CLINT1-202ENST00000518855 PDE1AP54750 535 aa6.24□□□□□ -1.41
CLINT1-202ENST00000518855 SRPK2P78362 688 aaKnown RBP6.24□□□□□ -1.41
CLINT1-202ENST00000518855 FKBP5Q13451 457 aaPredicted RBP6.24□□□□□ -1.41
CLINT1-202ENST00000518855 CAVIN1Q6NZI2 390 aaKnown RBP6.24□□□□□ -1.41
CLINT1-202ENST00000518855 CCDC94Q9BW85 323 aaPredicted RBP6.24□□□□□ -1.41
CLINT1-202ENST00000518855 MAP3K5Q99683 1374 aa6.24□□□□□ -1.41
CLINT1-202ENST00000518855 ARHGAP23Q9P227 1491 aa6.23□□□□□ -1.41
CLINT1-202ENST00000518855 HMMRO75330 724 aa6.23□□□□□ -1.41
CLINT1-202ENST00000518855 PTPN5P54829 565 aa6.23□□□□□ -1.41
CLINT1-202ENST00000518855 PKP1Q13835 747 aa6.23□□□□□ -1.41
CLINT1-202ENST00000518855 TMX3Q96JJ7 454 aa6.23□□□□□ -1.41
CLINT1-202ENST00000518855 ALDH8A1Q9H2A2 487 aaPredicted RBP6.23□□□□□ -1.41
CLINT1-202ENST00000518855 CABP1Q9NZU7 370 aa6.23□□□□□ -1.41
CLINT1-202ENST00000518855 RGPD8O14715 1765 aaPredicted RBP6.23□□□□□ -1.41
CLINT1-202ENST00000518855 SBNO1A3KN83 1393 aa6.23□□□□□ -1.41
CLINT1-202ENST00000518855 ADAMTS13Q76LX8 1427 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms