RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 NME8Q8N427 588 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 NKX2-3Q8TAU0 364 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 FBF1Q8TES7 1133 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 SEC16BQ96JE7 1060 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 C8orf48Q96LL4 319 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 DEPDC7Q96QD5 511 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 HOMER2Q9NSB8 354 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 ZNF358Q9NW07 568 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 POLIQ9UNA4 740 aa5.22□□□□□ -1.57
RNU4-60P-201ENST00000517239 HCLS1P14317 486 aaPredicted RBP5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 JUNDP17535 347 aa5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 NASPP49321 788 aaPredicted RBP5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 UBE4AQ14139 1066 aa5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 TAF1CQ15572 869 aaPredicted RBP5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 KMT5BQ4FZB7 885 aa5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 C4orf46Q504U0 113 aa5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 ARSHQ5FYA8 562 aa5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 COX20Q5RI15 118 aa5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 HOMER1Q86YM7 354 aa5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 PGBD3Q8N328 593 aa5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 LILRB2Q8N423 598 aa5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 TSR2Q969E8 191 aaKnown RBP5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 CARD14Q9BXL6 1004 aa5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 MAF1Q9H063 256 aa5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 COPRSQ9NQ92 184 aa5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 LHX6Q9UPM6 363 aa5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 THRAP3Q9Y2W1 955 aaKnown RBP5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 R3HCC1Q9Y3T6 440 aaKnown RBP5.21□□□□□ -1.58
RNU4-60P-201ENST00000517239 TNFRSF10BO14763 440 aa5.2□□□□□ -1.58
RNU4-60P-201ENST00000517239 DNM1Q05193 864 aaKnown RBP5.2□□□□□ -1.58
RNU4-60P-201ENST00000517239 ORC1Q13415 861 aa5.2□□□□□ -1.58
RNU4-60P-201ENST00000517239 RAB33AQ14088 237 aa5.2□□□□□ -1.58
RNU4-60P-201ENST00000517239 MEI1Q5TIA1 1274 aa5.2□□□□□ -1.58
RNU4-60P-201ENST00000517239 RAVER1Q8IY67 606 aaKnown RBP5.2□□□□□ -1.58
RNU4-60P-201ENST00000517239 TMTC2Q8N394 836 aa5.2□□□□□ -1.58
RNU4-60P-201ENST00000517239 GPATCH11Q8N954 259 aa5.2□□□□□ -1.58
RNU4-60P-201ENST00000517239 HNRNPLLQ8WVV9 542 aaKnown RBP5.2□□□□□ -1.58
RNU4-60P-201ENST00000517239 DNAJC7Q99615 494 aa5.2□□□□□ -1.58
RNU4-60P-201ENST00000517239 EVA1BQ9NVM1 165 aa5.2□□□□□ -1.58
RNU4-60P-201ENST00000517239 SEPT9Q9UHD8 586 aaPredicted RBP5.2□□□□□ -1.58
RNU4-60P-201ENST00000517239 EFR3BQ9Y2G0 817 aa5.2□□□□□ -1.58
RNU4-60P-201ENST00000517239 COMMD10Q9Y6G5 202 aa5.2□□□□□ -1.58
RNU4-60P-201ENST00000517239 MAGEB6P1A0A0J9YX57 407 aa5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 CCDC189A1A4V9 331 aa5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 EIF1AYO14602 144 aaKnown RBP5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 OPLAHO14841 1288 aa5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 KLF4O43474 513 aa5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 SAFB2Q14151 953 aaKnown RBP eCLIP5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 RASA3Q14644 834 aa5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 NBPF20Q3BBV1 942 aa5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 BRICD5Q6PL45 260 aa5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 FAM9BQ8IZU0 186 aa5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 GJD3Q8N144 294 aa5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 ABTB2Q8N961 1025 aa5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 RASGRP4Q8TDF6 673 aa5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 EDEM1Q92611 657 aa5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 SPON2Q9BUD6 331 aa5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 GNL3LQ9NVN8 582 aaKnown RBP5.19□□□□□ -1.58
RNU4-60P-201ENST00000517239 A0A1W2PRU2 124 aa5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 PPP1R12BO60237 982 aaPredicted RBP5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 NR1I2O75469 434 aa5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 LDHAP00338 332 aaKnown RBP5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 MYCP01106 439 aaPredicted RBP5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 CCNYL3P0C7X3 344 aa5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 USP5P45974 858 aa5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 PPP4R4Q6NUP7 873 aa5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 SAMD7Q7Z3H4 446 aa5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 LRP10Q7Z4F1 713 aa5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 KIAA0907Q7Z7F0 614 aaPredicted RBP5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 TRPM4Q8TD43 1214 aa5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 PNISRQ8TF01 805 aaKnown RBP5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 CPLX3Q8WVH0 158 aa5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 MPHOSPH6Q99547 160 aaKnown RBP5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 TSPAN10Q9H1Z9 355 aaPredicted RBP5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 BSDC1Q9NW68 430 aaPredicted RBP5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 CNTN3Q9P232 1028 aa5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 SERTAD1Q9UHV2 236 aa5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 ERBB3P21860 1342 aa5.18□□□□□ -1.58
RNU4-60P-201ENST00000517239 TMEM229AB2RXF0 380 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 BACH1O14867 736 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 KIF3BO15066 747 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 PLIN1O60240 522 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 PTMSP20962 102 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 CNGA1P29973 690 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 BRDTQ58F21 947 aaPredicted RBP5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 FAM26DQ5JW98 314 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 CCSAPQ6IQ19 270 aaPredicted RBP5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 C16orf86Q6ZW13 317 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 ERMP1Q7Z2K6 904 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 JAMLQ86YT9 394 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 KIAA0825Q8IV33 1275 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 ANAPC16Q96DE5 110 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 IL17RAQ96F46 866 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 KCNK17Q96T54 332 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 APBA2Q99767 749 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 OSBPL7Q9BZF2 842 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 ESF1Q9H501 851 aaKnown RBP5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 GINM1Q9NU53 330 aa5.17□□□□□ -1.58
RNU4-60P-201ENST00000517239 KBTBD4Q9NVX7 518 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms