RNA–Protein interactions for RNA: ENST00000513757.5

LPCAT1-205, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 4

Gene LPCAT1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-205ENST00000513757 NPHP1O15259 732 aa13.13□□□□□ -0.31
LPCAT1-205ENST00000513757 A1BGP04217 495 aa13.13□□□□□ -0.31
LPCAT1-205ENST00000513757 CCDC24Q8N4L8 307 aa13.13□□□□□ -0.31
LPCAT1-205ENST00000513757 MASTLQ96GX5 879 aa13.13□□□□□ -0.31
LPCAT1-205ENST00000513757 CACNA1SQ13698 1873 aa13.12□□□□□ -0.31
LPCAT1-205ENST00000513757 SCN4AP35499 1836 aa13.12□□□□□ -0.31
LPCAT1-205ENST00000513757 IQCA1LA6NCM1 817 aa13.12□□□□□ -0.31
LPCAT1-205ENST00000513757 CAPN15O75808 1086 aa13.12□□□□□ -0.31
LPCAT1-205ENST00000513757 PRPF40BQ6NWY9 871 aaKnown RBP13.12□□□□□ -0.31
LPCAT1-205ENST00000513757 CLEC4GQ6UXB4 293 aa13.12□□□□□ -0.31
LPCAT1-205ENST00000513757 DZIP3Q86Y13 1208 aaKnown RBP13.12□□□□□ -0.31
LPCAT1-205ENST00000513757 BTBD11A6QL63 1104 aa13.11□□□□□ -0.31
LPCAT1-205ENST00000513757 RGL2O15211 777 aa13.11□□□□□ -0.31
LPCAT1-205ENST00000513757 DDNO94850 711 aaPredicted RBP13.11□□□□□ -0.31
LPCAT1-205ENST00000513757 CCER1Q8TC90 406 aaPredicted RBP13.11□□□□□ -0.31
LPCAT1-205ENST00000513757 L3MBTL3Q96JM7 780 aaPredicted RBP13.11□□□□□ -0.31
LPCAT1-205ENST00000513757 CCDC93Q567U6 631 aa13.1□□□□□ -0.31
LPCAT1-205ENST00000513757 LDHDQ86WU2 507 aa13.1□□□□□ -0.31
LPCAT1-205ENST00000513757 C7orf43Q8WVR3 580 aa13.1□□□□□ -0.31
LPCAT1-205ENST00000513757 ZNF652Q9Y2D9 606 aa13.1□□□□□ -0.31
LPCAT1-205ENST00000513757 KLRG2A4D1S0 409 aaPredicted RBP13.09□□□□□ -0.31
LPCAT1-205ENST00000513757 POTEIP0CG38 1075 aa13.09□□□□□ -0.31
LPCAT1-205ENST00000513757 POTEJP0CG39 1038 aa13.09□□□□□ -0.31
LPCAT1-205ENST00000513757 NPR1P16066 1061 aa13.09□□□□□ -0.31
LPCAT1-205ENST00000513757 NBPF5PQ86XG9 351 aaPredicted RBP13.09□□□□□ -0.31
LPCAT1-205ENST00000513757 MKRN1Q9UHC7 482 aaKnown RBP13.09□□□□□ -0.31
LPCAT1-205ENST00000513757 USP16Q9Y5T5 823 aa13.09□□□□□ -0.31
LPCAT1-205ENST00000513757 CNTNAP1P78357 1384 aa13.08□□□□□ -0.31
LPCAT1-205ENST00000513757 KCNQ3O43525 872 aa13.08□□□□□ -0.32
LPCAT1-205ENST00000513757 SNRPA1P09661 255 aaKnown RBP13.08□□□□□ -0.32
LPCAT1-205ENST00000513757 PRKAR2BP31323 418 aa13.08□□□□□ -0.32
LPCAT1-205ENST00000513757 FKBP4Q02790 459 aaKnown RBP eCLIP13.08□□□□□ -0.32
LPCAT1-205ENST00000513757 PHACTR3Q96KR7 559 aa13.08□□□□□ -0.32
LPCAT1-205ENST00000513757 CFAP53Q96M91 514 aa13.08□□□□□ -0.32
LPCAT1-205ENST00000513757 RSPH6AQ9H0K4 717 aa13.08□□□□□ -0.32
LPCAT1-205ENST00000513757 TAF1DQ9H5J8 278 aaPredicted RBP13.08□□□□□ -0.32
LPCAT1-205ENST00000513757 PASKQ96RG2 1323 aa13.08□□□□□ -0.32
LPCAT1-205ENST00000513757 TPTE2Q6XPS3 522 aa13.07□□□□□ -0.32
LPCAT1-205ENST00000513757 RTKN2Q8IZC4 609 aa13.06□□□□□ -0.32
LPCAT1-205ENST00000513757 NUDCQ9Y266 331 aa13.06□□□□□ -0.32
LPCAT1-205ENST00000513757 TMEM88BA6NKF7 163 aa13.05□□□□□ -0.32
LPCAT1-205ENST00000513757 ITGBL1O95965 494 aaPredicted RBP13.05□□□□□ -0.32
LPCAT1-205ENST00000513757 PIP4K2AP48426 406 aaPredicted RBP13.05□□□□□ -0.32
LPCAT1-205ENST00000513757 RTF1Q92541 710 aaKnown RBP13.05□□□□□ -0.32
LPCAT1-205ENST00000513757 PRDM10Q9NQV6 1147 aa13.05□□□□□ -0.32
LPCAT1-205ENST00000513757 HACL1Q9UJ83 578 aa13.05□□□□□ -0.32
LPCAT1-205ENST00000513757 NIP7Q9Y221 180 aaKnown RBP eCLIP13.05□□□□□ -0.32
LPCAT1-205ENST00000513757 ADAMTSL1Q8N6G6 1762 aa13.04□□□□□ -0.32
LPCAT1-205ENST00000513757 PRAMEF22A3QJZ6 481 aa13.04□□□□□ -0.32
LPCAT1-205ENST00000513757 NBPF26B4DH59 902 aa13.04□□□□□ -0.32
LPCAT1-205ENST00000513757 FOXN1O15353 648 aa13.04□□□□□ -0.32
LPCAT1-205ENST00000513757 HTATSF1O43719 755 aaKnown RBP13.04□□□□□ -0.32
LPCAT1-205ENST00000513757 ALDH1B1P30837 517 aa13.04□□□□□ -0.32
LPCAT1-205ENST00000513757 NBPF10Q6P3W6 841 aaKnown RBP13.04□□□□□ -0.32
LPCAT1-205ENST00000513757 NBPF15Q8N660 670 aa13.04□□□□□ -0.32
LPCAT1-205ENST00000513757 ZNF277Q9NRM2 450 aaPredicted RBP13.04□□□□□ -0.32
LPCAT1-205ENST00000513757 ZNF541Q9H0D2 1346 aa13.04□□□□□ -0.32
LPCAT1-205ENST00000513757 EPHX2P34913 555 aa13.03□□□□□ -0.32
LPCAT1-205ENST00000513757 EAPPQ56P03 285 aaPredicted RBP13.03□□□□□ -0.32
LPCAT1-205ENST00000513757 MCM10Q7L590 875 aa13.03□□□□□ -0.32
LPCAT1-205ENST00000513757 PNMA8AQ86V59 439 aaPredicted RBP13.03□□□□□ -0.32
LPCAT1-205ENST00000513757 AIDAQ96BJ3 306 aa13.03□□□□□ -0.32
LPCAT1-205ENST00000513757 FZD9O00144 591 aa13.02□□□□□ -0.33
LPCAT1-205ENST00000513757 U2AF1L5P0DN76 240 aaPredicted RBP13.02□□□□□ -0.33
LPCAT1-205ENST00000513757 IARSP41252 1262 aaKnown RBP13.02□□□□□ -0.33
LPCAT1-205ENST00000513757 CTCFP49711 727 aaPredicted RBP13.02□□□□□ -0.33
LPCAT1-205ENST00000513757 VEGFBP49765 207 aa13.02□□□□□ -0.33
LPCAT1-205ENST00000513757 U2AF1Q01081 240 aaKnown RBP eCLIP13.02□□□□□ -0.33
LPCAT1-205ENST00000513757 CNGB1Q14028 1251 aaPredicted RBP13.02□□□□□ -0.33
LPCAT1-205ENST00000513757 CC2D2BQ6DHV5 1058 aa13.02□□□□□ -0.33
LPCAT1-205ENST00000513757 PSMD1Q99460 953 aa13.02□□□□□ -0.33
LPCAT1-205ENST00000513757 SNED1Q8TER0 1413 aa13.02□□□□□ -0.33
LPCAT1-205ENST00000513757 LAMB4A4D0S4 1761 aa13.02□□□□□ -0.33
LPCAT1-205ENST00000513757 GTF2E1P29083 439 aaPredicted RBP13.01□□□□□ -0.33
LPCAT1-205ENST00000513757 CRY2Q49AN0 593 aa13.01□□□□□ -0.33
LPCAT1-205ENST00000513757 GPC2Q8N158 579 aa13.01□□□□□ -0.33
LPCAT1-205ENST00000513757 SYNE4Q8N205 404 aa13.01□□□□□ -0.33
LPCAT1-205ENST00000513757 NYXQ9GZU5 481 aa13.01□□□□□ -0.33
LPCAT1-205ENST00000513757 WBP1LQ9NX94 342 aa13.01□□□□□ -0.33
LPCAT1-205ENST00000513757 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
LPCAT1-205ENST00000513757 RIC1Q4ADV7 1423 aa13.01□□□□□ -0.33
LPCAT1-205ENST00000513757 RNF123Q5XPI4 1314 aa13□□□□□ -0.33
LPCAT1-205ENST00000513757 RASSF10A6NK89 507 aa13□□□□□ -0.33
LPCAT1-205ENST00000513757 TAF7Q15545 349 aaPredicted RBP13□□□□□ -0.33
LPCAT1-205ENST00000513757 HLFQ16534 295 aa13□□□□□ -0.33
LPCAT1-205ENST00000513757 GRIPAP1Q4V328 841 aa13□□□□□ -0.33
LPCAT1-205ENST00000513757 OLFM4Q6UX06 510 aa13□□□□□ -0.33
LPCAT1-205ENST00000513757 JDP2Q8WYK2 163 aa13□□□□□ -0.33
LPCAT1-205ENST00000513757 IBTKQ9P2D0 1353 aaPredicted RBP12.99□□□□□ -0.33
LPCAT1-205ENST00000513757 FAM177BA6PVY3 158 aa12.99□□□□□ -0.33
LPCAT1-205ENST00000513757 ERVV-1B6SEH8 477 aa12.99□□□□□ -0.33
LPCAT1-205ENST00000513757 DCTN1Q14203 1278 aa12.99□□□□□ -0.33
LPCAT1-205ENST00000513757 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
LPCAT1-205ENST00000513757 NUP98P52948 1817 aa12.99□□□□□ -0.33
LPCAT1-205ENST00000513757 ABCC12Q96J65 1359 aa12.98□□□□□ -0.33
LPCAT1-205ENST00000513757 PPP2R1AP30153 589 aa12.98□□□□□ -0.33
LPCAT1-205ENST00000513757 HOXA10P31260 410 aaPredicted RBP12.98□□□□□ -0.33
LPCAT1-205ENST00000513757 EIF6P56537 245 aaKnown RBP12.98□□□□□ -0.33
LPCAT1-205ENST00000513757 DEFB115Q30KQ5 88 aa12.98□□□□□ -0.33
LPCAT1-205ENST00000513757 PNISRQ8TF01 805 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms