RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 MUC3BQ9H195 1237 aa4.68□□□□□ -1.66
AFP-205ENST00000513720 QTRT2Q9H974 415 aaKnown RBP4.68□□□□□ -1.66
AFP-205ENST00000513720 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.68□□□□□ -1.66
AFP-205ENST00000513720 TRMT1Q9NXH9 659 aaKnown RBP4.68□□□□□ -1.66
AFP-205ENST00000513720 CLIP2Q9UDT6 1046 aa4.68□□□□□ -1.66
AFP-205ENST00000513720 IP6K2Q9UHH9 426 aa4.68□□□□□ -1.66
AFP-205ENST00000513720 MKL2Q9ULH7 1088 aa4.68□□□□□ -1.66
AFP-205ENST00000513720 R3HCC1Q9Y3T6 440 aaKnown RBP4.68□□□□□ -1.66
AFP-205ENST00000513720 JRKLQ9Y4A0 524 aa4.68□□□□□ -1.66
AFP-205ENST00000513720 PCDHGA4Q9Y5G9 962 aa4.68□□□□□ -1.66
AFP-205ENST00000513720 COL4A3BPQ9Y5P4 624 aa4.68□□□□□ -1.66
AFP-205ENST00000513720 SMARCA2P51531 1590 aa4.68□□□□□ -1.66
AFP-205ENST00000513720 CARNS1A5YM72 827 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 SPDYE4A6NLX3 237 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 TMEM110-MUSTN1A8MSY1 372 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 GOLGA6L19H0YKK7 550 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 ERLIN1O75477 346 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 SASH1O94885 1247 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 RBP3P10745 1247 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 CDR1P51861 262 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 CCDC173Q0VFZ6 552 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 SFSWAPQ12872 951 aaKnown RBP4.67□□□□□ -1.66
AFP-205ENST00000513720 ZBTB17Q13105 803 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 WTAPQ15007 396 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 LONRF1Q17RB8 773 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 PARP10Q53GL7 1025 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 COBLL1Q53SF7 1204 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 TTC39BQ5VTQ0 682 aaPredicted RBP4.67□□□□□ -1.66
AFP-205ENST00000513720 HHATQ5VTY9 493 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 CPLX2Q6PUV4 134 aaKnown RBP4.67□□□□□ -1.66
AFP-205ENST00000513720 TXNDC2Q86VQ3 553 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 NLRP13Q86W25 1043 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 RELL1Q8IUW5 271 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 FAM114A1Q8IWE2 563 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 TRIM42Q8IWZ5 723 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 CLASRPQ8N2M8 674 aaKnown RBP4.67□□□□□ -1.66
AFP-205ENST00000513720 PRPF38AQ8NAV1 312 aaKnown RBP4.67□□□□□ -1.66
AFP-205ENST00000513720 UHMK1Q8TAS1 419 aaKnown RBP4.67□□□□□ -1.66
AFP-205ENST00000513720 USP33Q8TEY7 942 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 JDP2Q8WYK2 163 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 DHX38Q92620 1227 aaKnown RBP4.67□□□□□ -1.66
AFP-205ENST00000513720 TBC1D31Q96DN5 1066 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 BICD1Q96G01 975 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 MAP3K14Q99558 947 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 TANGO6Q9C0B7 1094 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 PDGFDQ9GZP0 370 aaPredicted RBP4.67□□□□□ -1.66
AFP-205ENST00000513720 NACA2Q9H009 215 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 RPAP3Q9H6T3 665 aaPredicted RBP4.67□□□□□ -1.66
AFP-205ENST00000513720 CD248Q9HCU0 757 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 INCENPQ9NQS7 918 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 DIAPH3Q9NSV4 1193 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 HOXC10Q9NYD6 342 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.67□□□□□ -1.66
AFP-205ENST00000513720 OGFRQ9NZT2 677 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 SEL1LQ9UBV2 794 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 BLOC1S6Q9UL45 172 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 KAT6BQ8WYB5 2073 aa4.67□□□□□ -1.66
AFP-205ENST00000513720 F8VZ95 297 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 MYO1BO43795 1136 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 VAMP4O75379 141 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 ATG7O95352 703 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 MMEP08473 750 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 TPM1P09493 284 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 MYBL2P10244 700 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 ATP2B1P20020 1258 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 ERCC5P28715 1186 aaPredicted RBP4.66□□□□□ -1.66
AFP-205ENST00000513720 NASPP49321 788 aaPredicted RBP4.66□□□□□ -1.66
AFP-205ENST00000513720 CACNB1Q02641 598 aaPredicted RBP4.66□□□□□ -1.66
AFP-205ENST00000513720 BRD3Q15059 726 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 RABEP1Q15276 862 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 DDB1Q16531 1140 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 KIF4BQ2VIQ3 1234 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 CCDC144BQ3MJ40 725 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 MEX3CQ5U5Q3 659 aaKnown RBP4.66□□□□□ -1.66
AFP-205ENST00000513720 FAAH2Q6GMR7 532 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 IQCEQ6IPM2 695 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 PPP4R4Q6NUP7 873 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 HDGFL2Q7Z4V5 671 aaPredicted RBP4.66□□□□□ -1.66
AFP-205ENST00000513720 KIAA1958Q8N8K9 716 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 ARL10Q8N8L6 244 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 MIGA1Q8NAN2 632 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 ZNF280CQ8ND82 737 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 FAM76AQ8TAV0 307 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 DNAAF4Q8WXU2 420 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 N4BP2L2Q92802 583 aaPredicted RBP4.66□□□□□ -1.66
AFP-205ENST00000513720 DDX27Q96GQ7 796 aaKnown RBP4.66□□□□□ -1.66
AFP-205ENST00000513720 AS3MTQ9HBK9 375 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 TRPV5Q9NQA5 729 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 SPATS2LQ9NUQ6 558 aaKnown RBP4.66□□□□□ -1.66
AFP-205ENST00000513720 MKS1Q9NXB0 559 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 CHMP5Q9NZZ3 219 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 SEPT10Q9P0V9 454 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 MKRN1Q9UHC7 482 aaKnown RBP4.66□□□□□ -1.66
AFP-205ENST00000513720 PCSK1NQ9UHG2 260 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 CFAP45Q9UL16 551 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 ASAP1Q9ULH1 1129 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 ATP8A1Q9Y2Q0 1164 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 RABGAP1Q9Y3P9 1069 aa4.66□□□□□ -1.66
AFP-205ENST00000513720 LRRFIP2Q9Y608 721 aaKnown RBP4.66□□□□□ -1.66
AFP-205ENST00000513720 U3KPZ7 1027 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms