RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 COPS6Q7L5N1 327 aa13.75□□□□□ -0.21
PFDN1-204ENST00000512707 RIC3Q7Z5B4 369 aa13.75□□□□□ -0.21
PFDN1-204ENST00000512707 NBPF15Q8N660 670 aa13.75□□□□□ -0.21
PFDN1-204ENST00000512707 LINC00116Q8NCU8 138 aa13.75□□□□□ -0.21
PFDN1-204ENST00000512707 ARXQ96QS3 562 aa13.75□□□□□ -0.21
PFDN1-204ENST00000512707 ZBTB1Q9Y2K1 713 aa13.75□□□□□ -0.21
PFDN1-204ENST00000512707 COL5A3P25940 1745 aaPredicted RBP13.75□□□□□ -0.21
PFDN1-204ENST00000512707 PXDNLA1KZ92 1463 aa13.74□□□□□ -0.21
PFDN1-204ENST00000512707 ABCC4O15439 1325 aa13.74□□□□□ -0.21
PFDN1-204ENST00000512707 IRX6P78412 446 aaPredicted RBP13.74□□□□□ -0.21
PFDN1-204ENST00000512707 ERICH6BQ5W0A0 696 aa13.74□□□□□ -0.21
PFDN1-204ENST00000512707 INTS5Q6P9B9 1019 aaKnown RBP13.74□□□□□ -0.21
PFDN1-204ENST00000512707 SLC4A10Q6U841 1118 aa13.74□□□□□ -0.21
PFDN1-204ENST00000512707 ANKRD13DQ6ZTN6 518 aa13.74□□□□□ -0.21
PFDN1-204ENST00000512707 ITPRIPQ8IWB1 547 aa13.74□□□□□ -0.21
PFDN1-204ENST00000512707 PI4KAP2A4QPH2 592 aa13.73□□□□□ -0.21
PFDN1-204ENST00000512707 GNPATO15228 680 aa13.73□□□□□ -0.21
PFDN1-204ENST00000512707 KCNQ4P56696 695 aa13.73□□□□□ -0.21
PFDN1-204ENST00000512707 PI4KAP1Q8N8J0 262 aa13.73□□□□□ -0.21
PFDN1-204ENST00000512707 PLBD2Q8NHP8 589 aa13.73□□□□□ -0.21
PFDN1-204ENST00000512707 PANK1Q8TE04 598 aa13.73□□□□□ -0.21
PFDN1-204ENST00000512707 DNAAF4Q8WXU2 420 aa13.73□□□□□ -0.21
PFDN1-204ENST00000512707 DDX19BQ9UMR2 479 aa13.73□□□□□ -0.21
PFDN1-204ENST00000512707 RTCBQ9Y3I0 505 aaKnown RBP13.73□□□□□ -0.21
PFDN1-204ENST00000512707 RPS6KA4O75676 772 aa13.72□□□□□ -0.21
PFDN1-204ENST00000512707 AAMPQ13685 434 aa13.72□□□□□ -0.21
PFDN1-204ENST00000512707 MVPQ14764 893 aaKnown RBP13.72□□□□□ -0.21
PFDN1-204ENST00000512707 C20orf194Q5TEA3 1177 aa13.72□□□□□ -0.21
PFDN1-204ENST00000512707 LRP10Q7Z4F1 713 aa13.72□□□□□ -0.21
PFDN1-204ENST00000512707 DZIP3Q86Y13 1208 aaKnown RBP13.72□□□□□ -0.21
PFDN1-204ENST00000512707 MAP3K2Q9Y2U5 619 aa13.72□□□□□ -0.21
PFDN1-204ENST00000512707 C4BP0C0L5 1744 aa13.72□□□□□ -0.21
PFDN1-204ENST00000512707 COL15A1P39059 1388 aa13.71□□□□□ -0.21
PFDN1-204ENST00000512707 F6X3S4 739 aa13.71□□□□□ -0.21
PFDN1-204ENST00000512707 EIF5P55010 431 aaKnown RBP13.71□□□□□ -0.21
PFDN1-204ENST00000512707 HSP90AB3PQ58FF7 597 aa13.71□□□□□ -0.21
PFDN1-204ENST00000512707 INTS3Q68E01 1043 aaKnown RBP13.71□□□□□ -0.21
PFDN1-204ENST00000512707 TMEM57Q8N5G2 664 aa13.71□□□□□ -0.21
PFDN1-204ENST00000512707 SRCIN1Q9C0H9 1055 aa13.71□□□□□ -0.21
PFDN1-204ENST00000512707 LRRC4BQ9NT99 713 aa13.71□□□□□ -0.21
PFDN1-204ENST00000512707 ZNF652Q9Y2D9 606 aa13.71□□□□□ -0.21
PFDN1-204ENST00000512707 COG6Q9Y2V7 657 aa13.71□□□□□ -0.21
PFDN1-204ENST00000512707 ADCY9O60503 1353 aa13.71□□□□□ -0.22
PFDN1-204ENST00000512707 MAP3K15Q6ZN16 1313 aa13.7□□□□□ -0.22
PFDN1-204ENST00000512707 TAF1LQ8IZX4 1826 aa13.7□□□□□ -0.22
PFDN1-204ENST00000512707 ERVV-1B6SEH8 477 aa13.7□□□□□ -0.22
PFDN1-204ENST00000512707 RLBP1P12271 317 aa13.7□□□□□ -0.22
PFDN1-204ENST00000512707 CRBNQ96SW2 442 aa13.7□□□□□ -0.22
PFDN1-204ENST00000512707 ZBTB3Q9H5J0 574 aa13.7□□□□□ -0.22
PFDN1-204ENST00000512707 ATP10DQ9P241 1426 aa13.7□□□□□ -0.22
PFDN1-204ENST00000512707 RGL2O15211 777 aa13.69□□□□□ -0.22
PFDN1-204ENST00000512707 ZPR1O75312 459 aa13.69□□□□□ -0.22
PFDN1-204ENST00000512707 ALDH1L1O75891 902 aa13.69□□□□□ -0.22
PFDN1-204ENST00000512707 TRAPPC3LQ5T215 181 aa13.69□□□□□ -0.22
PFDN1-204ENST00000512707 TTLL7Q6ZT98 887 aa13.69□□□□□ -0.22
PFDN1-204ENST00000512707 LINS1Q8NG48 757 aa13.69□□□□□ -0.22
PFDN1-204ENST00000512707 METTL22Q9BUU2 404 aaPredicted RBP13.69□□□□□ -0.22
PFDN1-204ENST00000512707 HDAC5Q9UQL6 1122 aa13.69□□□□□ -0.22
PFDN1-204ENST00000512707 TNNQ9UQP3 1299 aa13.69□□□□□ -0.22
PFDN1-204ENST00000512707 SSFA2P28290 1259 aa13.68□□□□□ -0.22
PFDN1-204ENST00000512707 RFC4P35249 363 aa13.68□□□□□ -0.22
PFDN1-204ENST00000512707 PROM2Q8N271 834 aa13.68□□□□□ -0.22
PFDN1-204ENST00000512707 FLAD1Q8NFF5 587 aa13.68□□□□□ -0.22
PFDN1-204ENST00000512707 TFCP2L1Q9NZI6 479 aa13.68□□□□□ -0.22
PFDN1-204ENST00000512707 TBC1D2BQ9UPU7 963 aa13.68□□□□□ -0.22
PFDN1-204ENST00000512707 PHF14O94880 888 aa13.67□□□□□ -0.22
PFDN1-204ENST00000512707 GNAI3P08754 354 aa13.67□□□□□ -0.22
PFDN1-204ENST00000512707 BEND3Q5T5X7 828 aa13.67□□□□□ -0.22
PFDN1-204ENST00000512707 GIGYF2Q6Y7W6 1299 aaKnown RBP13.67□□□□□ -0.22
PFDN1-204ENST00000512707 EXOC6Q8TAG9 804 aa13.67□□□□□ -0.22
PFDN1-204ENST00000512707 MYD88Q99836 296 aa13.67□□□□□ -0.22
PFDN1-204ENST00000512707 STK32BQ9NY57 414 aa13.67□□□□□ -0.22
PFDN1-204ENST00000512707 GTF3C3Q9Y5Q9 886 aa13.67□□□□□ -0.22
PFDN1-204ENST00000512707 CASZ1Q86V15 1759 aa13.67□□□□□ -0.22
PFDN1-204ENST00000512707 ARFGEF2Q9Y6D5 1785 aa13.66□□□□□ -0.22
PFDN1-204ENST00000512707 CLEC4GQ6UXB4 293 aa13.66□□□□□ -0.22
PFDN1-204ENST00000512707 C9orf78Q9NZ63 289 aaPredicted RBP13.66□□□□□ -0.22
PFDN1-204ENST00000512707 N4BP2Q86UW6 1770 aaPredicted RBP13.66□□□□□ -0.22
PFDN1-204ENST00000512707 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.65□□□□□ -0.22
PFDN1-204ENST00000512707 YY1P25490 414 aa13.65□□□□□ -0.22
PFDN1-204ENST00000512707 TCIRG1Q13488 830 aa13.65□□□□□ -0.22
PFDN1-204ENST00000512707 SPON1Q9HCB6 807 aa13.65□□□□□ -0.22
PFDN1-204ENST00000512707 NARFQ9UHQ1 456 aa13.65□□□□□ -0.22
PFDN1-204ENST00000512707 IBTKQ9P2D0 1353 aaPredicted RBP13.65□□□□□ -0.22
PFDN1-204ENST00000512707 MYH14Q7Z406 1995 aaKnown RBP13.65□□□□□ -0.22
PFDN1-204ENST00000512707 CAMTA2O94983 1202 aa13.64□□□□□ -0.23
PFDN1-204ENST00000512707 UBTFL1P0CB47 393 aaPredicted RBP13.64□□□□□ -0.23
PFDN1-204ENST00000512707 CCDC191Q8NCU4 936 aa13.64□□□□□ -0.23
PFDN1-204ENST00000512707 ARHGEF1Q92888 912 aaKnown RBP13.64□□□□□ -0.23
PFDN1-204ENST00000512707 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
PFDN1-204ENST00000512707 CWC25Q9NXE8 425 aaPredicted RBP13.64□□□□□ -0.23
PFDN1-204ENST00000512707 ZNF219Q9P2Y4 722 aaPredicted RBP13.64□□□□□ -0.23
PFDN1-204ENST00000512707 NEURL1BA8MQ27 555 aa13.63□□□□□ -0.23
PFDN1-204ENST00000512707 TRIM28Q13263 835 aaKnown RBP13.63□□□□□ -0.23
PFDN1-204ENST00000512707 CWF19L2Q2TBE0 894 aaKnown RBP13.63□□□□□ -0.23
PFDN1-204ENST00000512707 PARP10Q53GL7 1025 aa13.63□□□□□ -0.23
PFDN1-204ENST00000512707 USP42Q9H9J4 1324 aaKnown RBP13.63□□□□□ -0.23
PFDN1-204ENST00000512707 SCN7AQ01118 1682 aa13.63□□□□□ -0.23
PFDN1-204ENST00000512707 ATP5J2-PTCD1G3V325 749 aa13.62□□□□□ -0.23
PFDN1-204ENST00000512707 GRM8O00222 908 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms