RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 NCOA4Q13772 614 aa7.15□□□□□ -1.26
SMARCA5-202ENST00000508573 ELOA3BQ3SY89 546 aa7.15□□□□□ -1.26
SMARCA5-202ENST00000508573 SAMD5Q5TGI4 173 aa7.15□□□□□ -1.26
SMARCA5-202ENST00000508573 SYT9Q86SS6 491 aa7.15□□□□□ -1.26
SMARCA5-202ENST00000508573 TNS4Q8IZW8 715 aa7.15□□□□□ -1.26
SMARCA5-202ENST00000508573 DEPDC4Q8N2C3 294 aa7.15□□□□□ -1.26
SMARCA5-202ENST00000508573 ELOA3Q8NG57 546 aa7.15□□□□□ -1.26
SMARCA5-202ENST00000508573 ALG2Q9H553 416 aa7.15□□□□□ -1.26
SMARCA5-202ENST00000508573 EFSO43281 561 aa7.14□□□□□ -1.27
SMARCA5-202ENST00000508573 SFSWAPQ12872 951 aaKnown RBP7.14□□□□□ -1.27
SMARCA5-202ENST00000508573 TEAD4Q15561 434 aa7.14□□□□□ -1.27
SMARCA5-202ENST00000508573 COG6Q9Y2V7 657 aa7.14□□□□□ -1.27
SMARCA5-202ENST00000508573 LOC105371045A0A1W2PR82 267 aa7.13□□□□□ -1.27
SMARCA5-202ENST00000508573 MCM6Q14566 821 aa7.13□□□□□ -1.27
SMARCA5-202ENST00000508573 SERTM1A2A2V5 107 aa7.12□□□□□ -1.27
SMARCA5-202ENST00000508573 EML1O00423 815 aa7.12□□□□□ -1.27
SMARCA5-202ENST00000508573 SPATA31C1P0DKV0 1188 aa7.12□□□□□ -1.27
SMARCA5-202ENST00000508573 SLC9A9Q8IVB4 645 aa7.12□□□□□ -1.27
SMARCA5-202ENST00000508573 WWC1Q8IX03 1113 aa7.12□□□□□ -1.27
SMARCA5-202ENST00000508573 HCN4Q9Y3Q4 1203 aa7.12□□□□□ -1.27
SMARCA5-202ENST00000508573 SPDYE3A6NKU9 549 aa7.11□□□□□ -1.27
SMARCA5-202ENST00000508573 PRRT3Q5FWE3 981 aa7.11□□□□□ -1.27
SMARCA5-202ENST00000508573 C7orf43Q8WVR3 580 aa7.11□□□□□ -1.27
SMARCA5-202ENST00000508573 SLC30A3Q99726 388 aa7.11□□□□□ -1.27
SMARCA5-202ENST00000508573 ZBTB7BO15156 539 aaPredicted RBP7.1□□□□□ -1.27
SMARCA5-202ENST00000508573 SIN3BO75182 1162 aa7.1□□□□□ -1.27
SMARCA5-202ENST00000508573 APBA3O96018 575 aa7.1□□□□□ -1.27
SMARCA5-202ENST00000508573 SH3PXD2AQ5TCZ1 1133 aa7.1□□□□□ -1.27
SMARCA5-202ENST00000508573 NFATC2IPQ8NCF5 419 aa7.1□□□□□ -1.27
SMARCA5-202ENST00000508573 RHPN1Q8TCX5 695 aa7.1□□□□□ -1.27
SMARCA5-202ENST00000508573 SFI1A8K8P3 1242 aa7.09□□□□□ -1.27
SMARCA5-202ENST00000508573 USP17L5A8MUK1 530 aa7.09□□□□□ -1.27
SMARCA5-202ENST00000508573 FAM229AH3BQW9 127 aa7.09□□□□□ -1.27
SMARCA5-202ENST00000508573 M0R082 166 aa7.09□□□□□ -1.27
SMARCA5-202ENST00000508573 ITGB7P26010 798 aa7.09□□□□□ -1.27
SMARCA5-202ENST00000508573 EPHA4P54764 986 aa7.09□□□□□ -1.27
SMARCA5-202ENST00000508573 TRIM28Q13263 835 aaKnown RBP7.09□□□□□ -1.27
SMARCA5-202ENST00000508573 C8orf86Q6ZUL3 223 aa7.09□□□□□ -1.27
SMARCA5-202ENST00000508573 TRIM50Q86XT4 487 aa7.09□□□□□ -1.27
SMARCA5-202ENST00000508573 TPCN2Q8NHX9 752 aa7.09□□□□□ -1.27
SMARCA5-202ENST00000508573 ZNF417Q8TAU3 575 aa7.09□□□□□ -1.27
SMARCA5-202ENST00000508573 CEP63Q96MT8 703 aa7.09□□□□□ -1.27
SMARCA5-202ENST00000508573 ZNF587Q96SQ5 575 aaPredicted RBP7.09□□□□□ -1.27
SMARCA5-202ENST00000508573 ADARB2-AS1A8MUL3 147 aa7.08□□□□□ -1.28
SMARCA5-202ENST00000508573 SPEM2Q0P670 501 aa7.08□□□□□ -1.28
SMARCA5-202ENST00000508573 CCDC102BQ68D86 513 aa7.08□□□□□ -1.28
SMARCA5-202ENST00000508573 RAB44Q7Z6P3 723 aaPredicted RBP7.08□□□□□ -1.28
SMARCA5-202ENST00000508573 POM121Q96HA1 1249 aa7.08□□□□□ -1.28
SMARCA5-202ENST00000508573 CHMP3Q9Y3E7 222 aa7.08□□□□□ -1.28
SMARCA5-202ENST00000508573 STARD13Q9Y3M8 1113 aa7.08□□□□□ -1.28
SMARCA5-202ENST00000508573 RAD21O60216 631 aa7.07□□□□□ -1.28
SMARCA5-202ENST00000508573 NEUROD1Q13562 356 aa7.07□□□□□ -1.28
SMARCA5-202ENST00000508573 ZMYM1Q5SVZ6 1142 aa7.07□□□□□ -1.28
SMARCA5-202ENST00000508573 MICALL1Q8N3F8 863 aa7.07□□□□□ -1.28
SMARCA5-202ENST00000508573 MDFIQ99750 246 aa7.07□□□□□ -1.28
SMARCA5-202ENST00000508573 TSPAN10Q9H1Z9 355 aaPredicted RBP7.07□□□□□ -1.28
SMARCA5-202ENST00000508573 ANKIB1Q9P2G1 1089 aa7.07□□□□□ -1.28
SMARCA5-202ENST00000508573 ATP1A2P50993 1020 aa7.06□□□□□ -1.28
SMARCA5-202ENST00000508573 COL9A3Q14050 684 aaPredicted RBP7.06□□□□□ -1.28
SMARCA5-202ENST00000508573 GRIK4Q16099 956 aa7.06□□□□□ -1.28
SMARCA5-202ENST00000508573 HDGFL1Q5TGJ6 251 aa7.06□□□□□ -1.28
SMARCA5-202ENST00000508573 TNFRSF25Q93038 417 aa7.06□□□□□ -1.28
SMARCA5-202ENST00000508573 HSH2DQ96JZ2 352 aa7.06□□□□□ -1.28
SMARCA5-202ENST00000508573 IGFLR1Q9H665 355 aa7.06□□□□□ -1.28
SMARCA5-202ENST00000508573 BRD7Q9NPI1 651 aa7.06□□□□□ -1.28
SMARCA5-202ENST00000508573 KIAA1024Q9UPX6 916 aa7.06□□□□□ -1.28
SMARCA5-202ENST00000508573 KCNH4Q9UQ05 1017 aa7.06□□□□□ -1.28
SMARCA5-202ENST00000508573 GPC6Q9Y625 555 aaPredicted RBP7.06□□□□□ -1.28
SMARCA5-202ENST00000508573 POM121CA8CG34 1229 aa7.05□□□□□ -1.28
SMARCA5-202ENST00000508573 ALBP02768 609 aa7.05□□□□□ -1.28
SMARCA5-202ENST00000508573 ADH7P40394 386 aa7.05□□□□□ -1.28
SMARCA5-202ENST00000508573 PSMA6P60900 246 aaKnown RBP7.05□□□□□ -1.28
SMARCA5-202ENST00000508573 CLDN10P78369 228 aa7.05□□□□□ -1.28
SMARCA5-202ENST00000508573 RSPO4Q2I0M5 234 aaPredicted RBP7.05□□□□□ -1.28
SMARCA5-202ENST00000508573 TRAPPC3LQ5T215 181 aa7.05□□□□□ -1.28
SMARCA5-202ENST00000508573 C1orf53Q5VUE5 145 aa7.05□□□□□ -1.28
SMARCA5-202ENST00000508573 ZNF280CQ8ND82 737 aa7.05□□□□□ -1.28
SMARCA5-202ENST00000508573 PHACTR1Q9C0D0 580 aa7.05□□□□□ -1.28
SMARCA5-202ENST00000508573 TPSG1Q9NRR2 321 aa7.05□□□□□ -1.28
SMARCA5-202ENST00000508573 EIF5BO60841 1220 aaKnown RBP7.04□□□□□ -1.28
SMARCA5-202ENST00000508573 TBC1D8BQ0IIM8 1120 aa7.04□□□□□ -1.28
SMARCA5-202ENST00000508573 BHMTQ93088 406 aa7.04□□□□□ -1.28
SMARCA5-202ENST00000508573 SUSD3Q96L08 255 aa7.04□□□□□ -1.28
SMARCA5-202ENST00000508573 MKRN1Q9UHC7 482 aaKnown RBP7.04□□□□□ -1.28
SMARCA5-202ENST00000508573 USP17L3A6NCW0 530 aa7.03□□□□□ -1.28
SMARCA5-202ENST00000508573 USP17L4A6NCW7 530 aa7.03□□□□□ -1.28
SMARCA5-202ENST00000508573 PPP1R12BO60237 982 aaPredicted RBP7.03□□□□□ -1.28
SMARCA5-202ENST00000508573 NKAPLQ5M9Q1 402 aa7.03□□□□□ -1.28
SMARCA5-202ENST00000508573 USP17L2Q6R6M4 530 aa7.03□□□□□ -1.28
SMARCA5-202ENST00000508573 USP17L1Q7RTZ2 530 aa7.03□□□□□ -1.28
SMARCA5-202ENST00000508573 OGFOD1Q8N543 542 aa7.03□□□□□ -1.28
SMARCA5-202ENST00000508573 TSEN2Q8NCE0 465 aaKnown RBP7.03□□□□□ -1.28
SMARCA5-202ENST00000508573 ZMYND15Q9H091 742 aa7.03□□□□□ -1.28
SMARCA5-202ENST00000508573 PRDM6Q9NQX0 595 aa7.03□□□□□ -1.28
SMARCA5-202ENST00000508573 CCDC9Q9Y3X0 531 aaKnown RBP7.03□□□□□ -1.28
SMARCA5-202ENST00000508573 RBM19Q9Y4C8 960 aaKnown RBP7.03□□□□□ -1.28
SMARCA5-202ENST00000508573 C20orf204Q6ZNR8 217 aa7.02□□□□□ -1.29
SMARCA5-202ENST00000508573 PLEKHM2Q8IWE5 1019 aa7.02□□□□□ -1.29
SMARCA5-202ENST00000508573 LARGE2Q8N3Y3 721 aa7.02□□□□□ -1.29
SMARCA5-202ENST00000508573 ADAMTS19Q8TE59 1207 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms