RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 PMFBP1Q8TBY8 1022 aa12.66□□□□□ -0.38
PDLIM5-210ENST00000508216 GOPCQ9HD26 462 aa12.66□□□□□ -0.38
PDLIM5-210ENST00000508216 HFM1A2PYH4 1435 aa12.66□□□□□ -0.38
PDLIM5-210ENST00000508216 GPTP24298 496 aa12.66□□□□□ -0.38
PDLIM5-210ENST00000508216 MNAT1P51948 309 aa12.66□□□□□ -0.38
PDLIM5-210ENST00000508216 PSMD2Q13200 908 aa12.66□□□□□ -0.38
PDLIM5-210ENST00000508216 NFXL1Q6ZNB6 911 aa12.66□□□□□ -0.38
PDLIM5-210ENST00000508216 ZCRB1Q8TBF4 217 aaKnown RBP12.66□□□□□ -0.38
PDLIM5-210ENST00000508216 THOC1Q96FV9 657 aaKnown RBP12.66□□□□□ -0.38
PDLIM5-210ENST00000508216 RMI1Q9H9A7 625 aa12.66□□□□□ -0.38
PDLIM5-210ENST00000508216 TMEM63CQ9P1W3 806 aa12.66□□□□□ -0.38
PDLIM5-210ENST00000508216 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.66□□□□□ -0.38
PDLIM5-210ENST00000508216 K7ELQ4 463 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-210ENST00000508216 ZSCAN9O15535 394 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-210ENST00000508216 PDE3AQ14432 1141 aa12.65□□□□□ -0.38
PDLIM5-210ENST00000508216 PREPLQ4J6C6 727 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-210ENST00000508216 SDCCAG8Q86SQ7 713 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-210ENST00000508216 FBXO22Q8NEZ5 403 aa12.65□□□□□ -0.38
PDLIM5-210ENST00000508216 ATL2Q8NHH9 583 aa12.65□□□□□ -0.38
PDLIM5-210ENST00000508216 MICAL1Q8TDZ2 1067 aa12.65□□□□□ -0.38
PDLIM5-210ENST00000508216 C17orf50Q8WW18 174 aa12.65□□□□□ -0.38
PDLIM5-210ENST00000508216 KCNF1Q9H3M0 494 aa12.65□□□□□ -0.38
PDLIM5-210ENST00000508216 GPRASP1Q5JY77 1395 aa12.65□□□□□ -0.38
PDLIM5-210ENST00000508216 AATKQ6ZMQ8 1374 aa12.65□□□□□ -0.38
PDLIM5-210ENST00000508216 LRRC9Q6ZRR7 1453 aa12.65□□□□□ -0.38
PDLIM5-210ENST00000508216 ECEL1O95672 775 aa12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 NBPF7P0C2Y1 421 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 ILDR1Q86SU0 546 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 SLC39A7Q92504 469 aa12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 ARGLU1Q9NWB6 273 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 UTP6Q9NYH9 597 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 ERBB3P21860 1342 aa12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 PTPN23Q9H3S7 1636 aa12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 FYCO1Q9BQS8 1478 aa12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 A0A1B0GUA9 196 aa12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 RBM47A0AV96 593 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 U2SURPO15042 1029 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 ST5P78524 1137 aa12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 CCDC178Q5BJE1 867 aa12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 WLSQ5T9L3 541 aa12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 CACTIN-AS1Q8N1I8 211 aa12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 MICALL1Q8N3F8 863 aa12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 OGFOD1Q8N543 542 aa12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 CTCFLQ8NI51 663 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 DDX11Q96FC9 970 aa12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 KCND1Q9NSA2 647 aa12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 PYCARDQ9ULZ3 195 aa12.64□□□□□ -0.39
PDLIM5-210ENST00000508216 RAPGEF2Q9Y4G8 1499 aa12.63□□□□□ -0.39
PDLIM5-210ENST00000508216 NAIPQ13075 1403 aa12.63□□□□□ -0.39
PDLIM5-210ENST00000508216 ROCK1Q13464 1354 aa12.63□□□□□ -0.39
PDLIM5-210ENST00000508216 CCDC171Q6TFL3 1326 aa12.63□□□□□ -0.39
PDLIM5-210ENST00000508216 SYCE3A1L190 88 aa12.63□□□□□ -0.39
PDLIM5-210ENST00000508216 ADCY5O95622 1261 aa12.63□□□□□ -0.39
PDLIM5-210ENST00000508216 PAX3P23760 479 aa12.63□□□□□ -0.39
PDLIM5-210ENST00000508216 HNRNPH1P31943 449 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-210ENST00000508216 SFSWAPQ12872 951 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-210ENST00000508216 ANKRD45Q5TZF3 282 aa12.63□□□□□ -0.39
PDLIM5-210ENST00000508216 SLU7O95391 586 aaKnown RBP12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 OATP04181 439 aa12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 CCNHP51946 323 aaPredicted RBP12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 NAP1L1P55209 391 aaKnown RBP12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 SLC8A3P57103 927 aa12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 NEXNQ0ZGT2 675 aa12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 TSNAXIP1Q2TAA8 658 aa12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 NBPF8Q3BBV2 869 aa12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 HHATQ5VTY9 493 aa12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 RCSD1Q6JBY9 416 aa12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 LRRC31Q6UY01 552 aa12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 C17orf53Q8N3J3 647 aaPredicted RBP12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 TDRD7Q8NHU6 1098 aaKnown RBP12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.62□□□□□ -0.397e-7■■■■□ 21.5
PDLIM5-210ENST00000508216 KDM2AQ9Y2K7 1162 aa12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 FRMD4BQ9Y2L6 1034 aa12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 CFAP43Q8NDM7 1665 aa12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 ATP10AO60312 1499 aa12.62□□□□□ -0.39
PDLIM5-210ENST00000508216 ATXN2Q99700 1313 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 TPD52L2O43399 206 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 IGHDP01880 384 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 TUBB4AP04350 444 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 C7P10643 843 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 NAT1P18440 290 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 RAB27AP51159 221 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 HSP90AB2PQ58FF8 381 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 KLHL10Q6JEL2 608 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 BICD2Q8TD16 824 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 SRRTQ9BXP5 876 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 SAMD9Q5K651 1589 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 PLB1Q6P1J6 1458 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 REREQ9P2R6 1566 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 PDLIM1O00151 329 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 SMAPO00193 183 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 RLBP1P12271 317 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 NF2P35240 595 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 ISM2Q6H9L7 571 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 KIAA1328Q86T90 577 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 GTF3C6Q969F1 213 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 L2HGDHQ9H9P8 463 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 SLC24A3Q9HC58 644 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 TRPV5Q9NQA5 729 aa12.61□□□□□ -0.39
PDLIM5-210ENST00000508216 ZNF215Q9UL58 517 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms