RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 TSG101Q99816 390 aa19.2■□□□□ 0.66
PCDHA1-203ENST00000504120 TNIP1Q15025 636 aa19.2■□□□□ 0.66
PCDHA1-203ENST00000504120 ZNF444Q8N0Y2 327 aaPredicted RBP19.2■□□□□ 0.66
PCDHA1-203ENST00000504120 CRACR2BQ8N4Y2 399 aaPredicted RBP19.2■□□□□ 0.66
PCDHA1-203ENST00000504120 TOP1P11387 765 aaKnown RBP19.2■□□□□ 0.66
PCDHA1-203ENST00000504120 HMG20BQ9P0W2 317 aa19.2■□□□□ 0.66
PCDHA1-203ENST00000504120 DESP17661 470 aa19.19■□□□□ 0.66
PCDHA1-203ENST00000504120 PIP4K2BP78356 416 aa19.19■□□□□ 0.66
PCDHA1-203ENST00000504120 GUCY1B3Q02153 619 aa19.19■□□□□ 0.66
PCDHA1-203ENST00000504120 TBC1D32Q96NH3 1257 aa19.19■□□□□ 0.66
PCDHA1-203ENST00000504120 ANKIB1Q9P2G1 1089 aa19.19■□□□□ 0.66
PCDHA1-203ENST00000504120 TRAPPC8Q9Y2L5 1435 aa19.19■□□□□ 0.66
PCDHA1-203ENST00000504120 ABCC2Q92887 1545 aa19.19■□□□□ 0.66
PCDHA1-203ENST00000504120 STX6O43752 255 aa19.19■□□□□ 0.66
PCDHA1-203ENST00000504120 PPP1R42Q7Z4L9 355 aa19.19■□□□□ 0.66
PCDHA1-203ENST00000504120 PRAG1Q86YV5 1406 aa19.19■□□□□ 0.66
PCDHA1-203ENST00000504120 GOLGA6L7A0A1B0GV03 622 aa19.19■□□□□ 0.66
PCDHA1-203ENST00000504120 DCAF8L1A6NGE4 600 aa19.19■□□□□ 0.66
PCDHA1-203ENST00000504120 KIF18AQ8NI77 898 aa19.19■□□□□ 0.66
PCDHA1-203ENST00000504120 CLIP2Q9UDT6 1046 aa19.19■□□□□ 0.66
PCDHA1-203ENST00000504120 GJB2P29033 226 aa19.18■□□□□ 0.66
PCDHA1-203ENST00000504120 CENPHQ9H3R5 247 aa19.18■□□□□ 0.66
PCDHA1-203ENST00000504120 CWC25Q9NXE8 425 aaPredicted RBP19.18■□□□□ 0.66
PCDHA1-203ENST00000504120 FGFR1OPO95684 399 aaKnown RBP19.18■□□□□ 0.66
PCDHA1-203ENST00000504120 IGHDP01880 384 aa19.18■□□□□ 0.66
PCDHA1-203ENST00000504120 SLF2Q8IX21 1173 aa19.18■□□□□ 0.66
PCDHA1-203ENST00000504120 NEMFO60524 1076 aa19.18■□□□□ 0.66
PCDHA1-203ENST00000504120 KLHL10Q6JEL2 608 aa19.18■□□□□ 0.66
PCDHA1-203ENST00000504120 KIF5CO60282 957 aa19.18■□□□□ 0.66
PCDHA1-203ENST00000504120 CATIPQ7Z7H3 387 aa19.18■□□□□ 0.66
PCDHA1-203ENST00000504120 CNNM3Q8NE01 707 aa19.17■□□□□ 0.66
PCDHA1-203ENST00000504120 PI4KAP2A4QPH2 592 aa19.17■□□□□ 0.66
PCDHA1-203ENST00000504120 TMEM266Q2M3C6 531 aa19.17■□□□□ 0.66
PCDHA1-203ENST00000504120 PI4KAP1Q8N8J0 262 aa19.17■□□□□ 0.66
PCDHA1-203ENST00000504120 CCDC102AQ96A19 550 aa19.17■□□□□ 0.66
PCDHA1-203ENST00000504120 TMCO3Q6UWJ1 677 aa19.17■□□□□ 0.66
PCDHA1-203ENST00000504120 FSIP1Q8NA03 581 aa19.17■□□□□ 0.66
PCDHA1-203ENST00000504120 ACEP12821 1306 aa19.17■□□□□ 0.66
PCDHA1-203ENST00000504120 RRP9O43818 475 aaKnown RBP19.17■□□□□ 0.66
PCDHA1-203ENST00000504120 POTEJP0CG39 1038 aa19.17■□□□□ 0.66
PCDHA1-203ENST00000504120 NUCB1Q02818 461 aa19.17■□□□□ 0.66
PCDHA1-203ENST00000504120 ZBTB3Q9H5J0 574 aa19.17■□□□□ 0.66
PCDHA1-203ENST00000504120 DNMT1P26358 1616 aaKnown RBP19.17■□□□□ 0.66
PCDHA1-203ENST00000504120 CCDC194A0A1B0GVG4 234 aa19.16■□□□□ 0.66
PCDHA1-203ENST00000504120 GOLIM4O00461 696 aa19.16■□□□□ 0.66
PCDHA1-203ENST00000504120 FAM193AP78312 1265 aa19.16■□□□□ 0.66
PCDHA1-203ENST00000504120 KRT28Q7Z3Y7 464 aa19.16■□□□□ 0.66
PCDHA1-203ENST00000504120 FAM83GA6ND36 823 aa19.16■□□□□ 0.66
PCDHA1-203ENST00000504120 KIF20AO95235 890 aa19.16■□□□□ 0.66
PCDHA1-203ENST00000504120 CCT2P78371 535 aaKnown RBP19.16■□□□□ 0.66
PCDHA1-203ENST00000504120 EIF2AK4Q9P2K8 1649 aaKnown RBP19.16■□□□□ 0.66
PCDHA1-203ENST00000504120 MATR3P43243 847 aaKnown RBP eCLIP19.16■□□□□ 0.66
PCDHA1-203ENST00000504120 NEK1Q96PY6 1258 aa19.16■□□□□ 0.66
PCDHA1-203ENST00000504120 TNRQ92752 1358 aa19.15■□□□□ 0.66
PCDHA1-203ENST00000504120 NLRP5P59047 1200 aa19.15■□□□□ 0.66
PCDHA1-203ENST00000504120 ENOX2Q16206 610 aaKnown RBP19.15■□□□□ 0.66
PCDHA1-203ENST00000504120 CKAP2LQ8IYA6 745 aa19.15■□□□□ 0.66
PCDHA1-203ENST00000504120 CCDC82Q8N4S0 544 aa19.15■□□□□ 0.66
PCDHA1-203ENST00000504120 SAMD9Q5K651 1589 aa19.15■□□□□ 0.66
PCDHA1-203ENST00000504120 LDHAL6AQ6ZMR3 332 aa19.15■□□□□ 0.66
PCDHA1-203ENST00000504120 EXOC5O00471 708 aa19.15■□□□□ 0.66
PCDHA1-203ENST00000504120 CACNA2D4Q7Z3S7 1137 aa19.15■□□□□ 0.66
PCDHA1-203ENST00000504120 USP16Q9Y5T5 823 aa19.15■□□□□ 0.66
PCDHA1-203ENST00000504120 ARHGEF12Q9NZN5 1544 aa19.15■□□□□ 0.66
PCDHA1-203ENST00000504120 SNRPA1P09661 255 aaKnown RBP19.14■□□□□ 0.66
PCDHA1-203ENST00000504120 CETN2P41208 172 aa19.14■□□□□ 0.66
PCDHA1-203ENST00000504120 GSDMDP57764 484 aa19.14■□□□□ 0.66
PCDHA1-203ENST00000504120 STX1AQ16623 288 aa19.14■□□□□ 0.66
PCDHA1-203ENST00000504120 VPS36Q86VN1 386 aa19.14■□□□□ 0.66
PCDHA1-203ENST00000504120 TAX1BP1Q86VP1 789 aa19.14■□□□□ 0.66
PCDHA1-203ENST00000504120 BAG4O95429 457 aaKnown RBP19.14■□□□□ 0.65
PCDHA1-203ENST00000504120 IARSP41252 1262 aaKnown RBP19.14■□□□□ 0.65
PCDHA1-203ENST00000504120 USP25Q9UHP3 1055 aa19.14■□□□□ 0.65
PCDHA1-203ENST00000504120 CAVIN2O95810 425 aa19.14■□□□□ 0.65
PCDHA1-203ENST00000504120 CASQ1P31415 396 aa19.14■□□□□ 0.65
PCDHA1-203ENST00000504120 CRACR2AQ9BSW2 395 aa19.14■□□□□ 0.65
PCDHA1-203ENST00000504120 CDC5LQ99459 802 aaKnown RBP19.14■□□□□ 0.65
PCDHA1-203ENST00000504120 UBE3BQ7Z3V4 1068 aa19.13■□□□□ 0.65
PCDHA1-203ENST00000504120 ANKRD62A6NC57 917 aa19.13■□□□□ 0.65
PCDHA1-203ENST00000504120 RHPN1Q8TCX5 695 aa19.13■□□□□ 0.65
PCDHA1-203ENST00000504120 TTC21AQ8NDW8 1320 aa19.13■□□□□ 0.65
PCDHA1-203ENST00000504120 ASXL1Q8IXJ9 1541 aa19.13■□□□□ 0.65
PCDHA1-203ENST00000504120 GPTP24298 496 aa19.13■□□□□ 0.65
PCDHA1-203ENST00000504120 MCM3P25205 808 aa19.13■□□□□ 0.65
PCDHA1-203ENST00000504120 UBE2HP62256 183 aa19.13■□□□□ 0.65
PCDHA1-203ENST00000504120 CCDC12Q8WUD4 166 aaPredicted RBP19.13■□□□□ 0.65
PCDHA1-203ENST00000504120 PYM1Q9BRP8 204 aaKnown RBP19.13■□□□□ 0.65
PCDHA1-203ENST00000504120 KIF5BP33176 963 aa19.12■□□□□ 0.65
PCDHA1-203ENST00000504120 TMEM67Q5HYA8 995 aa19.12■□□□□ 0.65
PCDHA1-203ENST00000504120 NCOA7Q8NI08 942 aa19.12■□□□□ 0.65
PCDHA1-203ENST00000504120 CCDC96Q2M329 555 aa19.12■□□□□ 0.65
PCDHA1-203ENST00000504120 KIF4BQ2VIQ3 1234 aa19.12■□□□□ 0.65
PCDHA1-203ENST00000504120 MAP9Q49MG5 647 aa19.12■□□□□ 0.65
PCDHA1-203ENST00000504120 ANKRD24Q8TF21 1146 aa19.12■□□□□ 0.65
PCDHA1-203ENST00000504120 KLHL40Q2TBA0 621 aa19.12■□□□□ 0.65
PCDHA1-203ENST00000504120 RPGRQ92834 1020 aaKnown RBP19.12■□□□□ 0.65
PCDHA1-203ENST00000504120 CUL5Q93034 780 aa19.12■□□□□ 0.65
PCDHA1-203ENST00000504120 PUS7Q96PZ0 661 aaKnown RBP19.12■□□□□ 0.65
PCDHA1-203ENST00000504120 TFIP11Q9UBB9 837 aaKnown RBP19.12■□□□□ 0.65
PCDHA1-203ENST00000504120 ADGRL2O95490 1459 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms