RNA–Protein interactions for RNA: ENST00000503868.5

PTCD2-207, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-207ENST00000503868 LINS1Q8NG48 757 aa17.07■□□□□ 0.32
PTCD2-207ENST00000503868 ZBTB1Q9Y2K1 713 aa17.07■□□□□ 0.32
PTCD2-207ENST00000503868 EP400Q96L91 3159 aa17.07■□□□□ 0.32
PTCD2-207ENST00000503868 IL6STP40189 918 aaPredicted RBP17.07■□□□□ 0.32
PTCD2-207ENST00000503868 IGKV5-2P06315 115 aa17.06■□□□□ 0.32
PTCD2-207ENST00000503868 GNAI3P08754 354 aa17.06■□□□□ 0.32
PTCD2-207ENST00000503868 RWDD1Q9H446 243 aaPredicted RBP17.06■□□□□ 0.32
PTCD2-207ENST00000503868 C1orf115Q9H7X2 142 aa17.06■□□□□ 0.32
PTCD2-207ENST00000503868 CCDC87Q9NVE4 849 aa17.06■□□□□ 0.32
PTCD2-207ENST00000503868 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
PTCD2-207ENST00000503868 CRKLP46109 303 aaKnown RBP17.05■□□□□ 0.32
PTCD2-207ENST00000503868 EIF5P55010 431 aaKnown RBP17.05■□□□□ 0.32
PTCD2-207ENST00000503868 SIRT2Q8IXJ6 389 aa17.05■□□□□ 0.32
PTCD2-207ENST00000503868 NEXNQ0ZGT2 675 aa17.04■□□□□ 0.32
PTCD2-207ENST00000503868 CWF19L2Q2TBE0 894 aaKnown RBP17.04■□□□□ 0.32
PTCD2-207ENST00000503868 RPAP2Q8IXW5 612 aaPredicted RBP17.04■□□□□ 0.32
PTCD2-207ENST00000503868 LINC00116Q8NCU8 138 aa17.04■□□□□ 0.32
PTCD2-207ENST00000503868 MYD88Q99836 296 aa17.04■□□□□ 0.32
PTCD2-207ENST00000503868 AFDNP55196 1824 aaKnown RBP17.03■□□□□ 0.32
PTCD2-207ENST00000503868 UTYO14607 1347 aa17.03■□□□□ 0.32
PTCD2-207ENST00000503868 NEURL1BA8MQ27 555 aa17.03■□□□□ 0.32
PTCD2-207ENST00000503868 TRIM37O94972 964 aa17.03■□□□□ 0.32
PTCD2-207ENST00000503868 GNAI2P04899 355 aa17.03■□□□□ 0.32
PTCD2-207ENST00000503868 ANKRD44Q8N8A2 993 aa17.03■□□□□ 0.32
PTCD2-207ENST00000503868 CNTNAP4Q9C0A0 1308 aa17.02■□□□□ 0.32
PTCD2-207ENST00000503868 NBPF7P0C2Y1 421 aaPredicted RBP17.02■□□□□ 0.32
PTCD2-207ENST00000503868 RC3H1Q5TC82 1133 aaKnown RBP17.02■□□□□ 0.32
PTCD2-207ENST00000503868 CEP85Q6P2H3 762 aa17.02■□□□□ 0.32
PTCD2-207ENST00000503868 MAP3K15Q6ZN16 1313 aa17.02■□□□□ 0.31
PTCD2-207ENST00000503868 KCNQ4P56696 695 aa17.01■□□□□ 0.31
PTCD2-207ENST00000503868 ZBTB3Q9H5J0 574 aa17.01■□□□□ 0.31
PTCD2-207ENST00000503868 CCNL1Q9UK58 526 aaPredicted RBP17.01■□□□□ 0.31
PTCD2-207ENST00000503868 NUP98P52948 1817 aa17.01■□□□□ 0.31
PTCD2-207ENST00000503868 UBTFL1P0CB47 393 aaPredicted RBP17.01■□□□□ 0.31
PTCD2-207ENST00000503868 GCKRQ14397 625 aa17.01■□□□□ 0.31
PTCD2-207ENST00000503868 KIF6Q6ZMV9 814 aa17.01■□□□□ 0.31
PTCD2-207ENST00000503868 ZNF330Q9Y3S2 320 aaPredicted RBP17.01■□□□□ 0.31
PTCD2-207ENST00000503868 ERVV-1B6SEH8 477 aa17■□□□□ 0.31
PTCD2-207ENST00000503868 GIGYF2Q6Y7W6 1299 aaKnown RBP17■□□□□ 0.31
PTCD2-207ENST00000503868 SMC5Q8IY18 1101 aa17■□□□□ 0.31
PTCD2-207ENST00000503868 GRM8O00222 908 aa16.99■□□□□ 0.31
PTCD2-207ENST00000503868 TRIM28Q13263 835 aaKnown RBP16.99■□□□□ 0.31
PTCD2-207ENST00000503868 TCIRG1Q13488 830 aa16.99■□□□□ 0.31
PTCD2-207ENST00000503868 ISCA1Q9BUE6 129 aa16.99■□□□□ 0.31
PTCD2-207ENST00000503868 C9orf78Q9NZ63 289 aaPredicted RBP16.99■□□□□ 0.31
PTCD2-207ENST00000503868 LRRFIP2Q9Y608 721 aaKnown RBP16.99■□□□□ 0.31
PTCD2-207ENST00000503868 ANKRD36CQ5JPF3 1778 aa16.99■□□□□ 0.31
PTCD2-207ENST00000503868 ATP5J2-PTCD1G3V325 749 aa16.98■□□□□ 0.31
PTCD2-207ENST00000503868 ATP8B2P98198 1209 aa16.98■□□□□ 0.31
PTCD2-207ENST00000503868 DZIP3Q86Y13 1208 aaKnown RBP16.98■□□□□ 0.31
PTCD2-207ENST00000503868 LRRC4BQ9NT99 713 aa16.98■□□□□ 0.31
PTCD2-207ENST00000503868 HLFQ16534 295 aa16.97■□□□□ 0.31
PTCD2-207ENST00000503868 CCDC191Q8NCU4 936 aa16.97■□□□□ 0.31
PTCD2-207ENST00000503868 TBC1D2BQ9UPU7 963 aa16.97■□□□□ 0.31
PTCD2-207ENST00000503868 C4BP0C0L5 1744 aa16.97■□□□□ 0.31
PTCD2-207ENST00000503868 PLSCR1O15162 318 aa16.97■□□□□ 0.31
PTCD2-207ENST00000503868 RPS6KA4O75676 772 aa16.97■□□□□ 0.31
PTCD2-207ENST00000503868 SLC27A3Q5K4L6 730 aa16.97■□□□□ 0.31
PTCD2-207ENST00000503868 NPM2Q86SE8 214 aaKnown RBP16.97■□□□□ 0.31
PTCD2-207ENST00000503868 HDAC5Q9UQL6 1122 aa16.97■□□□□ 0.31
PTCD2-207ENST00000503868 COL15A1P39059 1388 aa16.96■□□□□ 0.31
PTCD2-207ENST00000503868 CASP7P55210 303 aa16.96■□□□□ 0.31
PTCD2-207ENST00000503868 HSP90AB3PQ58FF7 597 aa16.96■□□□□ 0.31
PTCD2-207ENST00000503868 GCC1Q96CN9 775 aa16.96■□□□□ 0.31
PTCD2-207ENST00000503868 KAZALD1Q96I82 304 aa16.96■□□□□ 0.31
PTCD2-207ENST00000503868 DCTPP1Q9H773 170 aa16.96■□□□□ 0.31
PTCD2-207ENST00000503868 TNS1Q9HBL0 1735 aaKnown RBP16.96■□□□□ 0.31
PTCD2-207ENST00000503868 BCORQ6W2J9 1755 aa16.96■□□□□ 0.3
PTCD2-207ENST00000503868 H7C1W4 665 aa16.95■□□□□ 0.3
PTCD2-207ENST00000503868 PROM2Q8N271 834 aa16.95■□□□□ 0.3
PTCD2-207ENST00000503868 CWC25Q9NXE8 425 aaPredicted RBP16.95■□□□□ 0.3
PTCD2-207ENST00000503868 A0A087WZG4 1122 aa16.94■□□□□ 0.3
PTCD2-207ENST00000503868 CAMTA2O94983 1202 aa16.94■□□□□ 0.3
PTCD2-207ENST00000503868 MTX1Q13505 466 aa16.94■□□□□ 0.3
PTCD2-207ENST00000503868 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
PTCD2-207ENST00000503868 ARXQ96QS3 562 aa16.94■□□□□ 0.3
PTCD2-207ENST00000503868 PNMA6EA0A0J9YXQ4 647 aa16.94■□□□□ 0.3
PTCD2-207ENST00000503868 HMMRO75330 724 aa16.94■□□□□ 0.3
PTCD2-207ENST00000503868 SSH3Q8TE77 659 aa16.94■□□□□ 0.3
PTCD2-207ENST00000503868 SUCLG2Q96I99 432 aa16.94■□□□□ 0.3
PTCD2-207ENST00000503868 PDZRN3Q9UPQ7 1066 aa16.94■□□□□ 0.3
PTCD2-207ENST00000503868 RGL2O15211 777 aa16.93■□□□□ 0.3
PTCD2-207ENST00000503868 POLA2Q14181 598 aa16.93■□□□□ 0.3
PTCD2-207ENST00000503868 ZNF34Q8IZ26 560 aa16.93■□□□□ 0.3
PTCD2-207ENST00000503868 RGPD3A6NKT7 1758 aaPredicted RBP16.93■□□□□ 0.3
PTCD2-207ENST00000503868 RGPD4Q7Z3J3 1758 aa16.93■□□□□ 0.3
PTCD2-207ENST00000503868 APBA3O96018 575 aa16.92■□□□□ 0.3
PTCD2-207ENST00000503868 TXNRD1Q16881 649 aa16.92■□□□□ 0.3
PTCD2-207ENST00000503868 PPP1R42Q7Z4L9 355 aa16.92■□□□□ 0.3
PTCD2-207ENST00000503868 SKAP1Q86WV1 359 aa16.92■□□□□ 0.3
PTCD2-207ENST00000503868 UBR3Q6ZT12 1888 aa16.92■□□□□ 0.3
PTCD2-207ENST00000503868 NLRP10Q86W26 655 aa16.91■□□□□ 0.3
PTCD2-207ENST00000503868 RTCBQ9Y3I0 505 aaKnown RBP16.91■□□□□ 0.3
PTCD2-207ENST00000503868 GNPATO15228 680 aa16.91■□□□□ 0.3
PTCD2-207ENST00000503868 HMGB2P26583 209 aaKnown RBP16.91■□□□□ 0.3
PTCD2-207ENST00000503868 NUCB1Q02818 461 aa16.91■□□□□ 0.3
PTCD2-207ENST00000503868 CLEC4GQ6UXB4 293 aa16.91■□□□□ 0.3
PTCD2-207ENST00000503868 UBE3BQ7Z3V4 1068 aa16.91■□□□□ 0.3
PTCD2-207ENST00000503868 AMIGO3Q86WK7 504 aa16.91■□□□□ 0.3
PTCD2-207ENST00000503868 BICC1Q9H694 974 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms