RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 TBC1D2BQ9UPU7 963 aa14.63□□□□□ -0.07
CTTN-208ENST00000498223 ARFGEF2Q9Y6D5 1785 aa14.62□□□□□ -0.07
CTTN-208ENST00000498223 AFDNP55196 1824 aaKnown RBP14.62□□□□□ -0.07
CTTN-208ENST00000498223 ADRA2BP18089 450 aa14.62□□□□□ -0.07
CTTN-208ENST00000498223 RARSP54136 660 aaKnown RBP14.62□□□□□ -0.07
CTTN-208ENST00000498223 PDIA6Q15084 440 aa14.62□□□□□ -0.07
CTTN-208ENST00000498223 PHAXQ9H814 394 aaKnown RBP14.62□□□□□ -0.07
CTTN-208ENST00000498223 RCAN3Q9UKA8 241 aa14.62□□□□□ -0.07
CTTN-208ENST00000498223 BCORQ6W2J9 1755 aa14.62□□□□□ -0.07
CTTN-208ENST00000498223 DDX58O95786 925 aaKnown RBP14.61□□□□□ -0.07
CTTN-208ENST00000498223 TTLL7Q6ZT98 887 aa14.61□□□□□ -0.07
CTTN-208ENST00000498223 COL23A1Q86Y22 540 aaPredicted RBP14.61□□□□□ -0.07
CTTN-208ENST00000498223 MRPL50Q8N5N7 158 aaKnown RBP14.61□□□□□ -0.07
CTTN-208ENST00000498223 ANKRD36CQ5JPF3 1778 aa14.6□□□□□ -0.07
CTTN-208ENST00000498223 FKBP5Q13451 457 aaPredicted RBP14.6□□□□□ -0.07
CTTN-208ENST00000498223 G2E3Q7L622 706 aa14.6□□□□□ -0.07
CTTN-208ENST00000498223 RIC3Q7Z5B4 369 aa14.6□□□□□ -0.07
CTTN-208ENST00000498223 AMIGO3Q86WK7 504 aa14.6□□□□□ -0.07
CTTN-208ENST00000498223 FRAT1Q92837 279 aaPredicted RBP14.6□□□□□ -0.07
CTTN-208ENST00000498223 ZBTB3Q9H5J0 574 aa14.6□□□□□ -0.07
CTTN-208ENST00000498223 SRP68Q9UHB9 627 aaKnown RBP14.6□□□□□ -0.07
CTTN-208ENST00000498223 SCN7AQ01118 1682 aa14.59□□□□□ -0.07
CTTN-208ENST00000498223 BCAR3O75815 825 aa14.59□□□□□ -0.07
CTTN-208ENST00000498223 FLIIQ13045 1269 aa14.59□□□□□ -0.07
CTTN-208ENST00000498223 CENPBP07199 599 aaPredicted RBP14.58□□□□□ -0.08
CTTN-208ENST00000498223 USPL1Q5W0Q7 1092 aa14.58□□□□□ -0.08
CTTN-208ENST00000498223 ANKRD13DQ6ZTN6 518 aa14.58□□□□□ -0.08
CTTN-208ENST00000498223 NARFQ9UHQ1 456 aa14.58□□□□□ -0.08
CTTN-208ENST00000498223 ZNF652Q9Y2D9 606 aa14.58□□□□□ -0.08
CTTN-208ENST00000498223 MAP3K15Q6ZN16 1313 aa14.58□□□□□ -0.08
CTTN-208ENST00000498223 KIF16BQ96L93 1317 aa14.58□□□□□ -0.08
CTTN-208ENST00000498223 UTRNP46939 3433 aa14.58□□□□□ -0.08
CTTN-208ENST00000498223 IPO8O15397 1037 aaKnown RBP14.57□□□□□ -0.08
CTTN-208ENST00000498223 LRP10Q7Z4F1 713 aa14.57□□□□□ -0.08
CTTN-208ENST00000498223 PLBD2Q8NHP8 589 aa14.57□□□□□ -0.08
CTTN-208ENST00000498223 NOB1Q9ULX3 412 aaKnown RBP14.57□□□□□ -0.08
CTTN-208ENST00000498223 USP42Q9H9J4 1324 aaKnown RBP14.57□□□□□ -0.08
CTTN-208ENST00000498223 CAMTA2O94983 1202 aa14.56□□□□□ -0.08
CTTN-208ENST00000498223 MSL1Q68DK7 614 aa14.56□□□□□ -0.08
CTTN-208ENST00000498223 KSR2Q6VAB6 950 aa14.56□□□□□ -0.08
CTTN-208ENST00000498223 BICDL1Q6ZP65 573 aa14.56□□□□□ -0.08
CTTN-208ENST00000498223 MAP3K2Q9Y2U5 619 aa14.56□□□□□ -0.08
CTTN-208ENST00000498223 PTPRCP08575 1304 aa14.56□□□□□ -0.08
CTTN-208ENST00000498223 PI4KAP2A4QPH2 592 aa14.55□□□□□ -0.08
CTTN-208ENST00000498223 ERVV-1B6SEH8 477 aa14.55□□□□□ -0.08
CTTN-208ENST00000498223 HLFQ16534 295 aa14.55□□□□□ -0.08
CTTN-208ENST00000498223 SLC4A10Q6U841 1118 aa14.55□□□□□ -0.08
CTTN-208ENST00000498223 KLHL34Q8N239 644 aa14.55□□□□□ -0.08
CTTN-208ENST00000498223 PI4KAP1Q8N8J0 262 aa14.55□□□□□ -0.08
CTTN-208ENST00000498223 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.55□□□□□ -0.08
CTTN-208ENST00000498223 COL24A1Q17RW2 1714 aa14.55□□□□□ -0.08
CTTN-208ENST00000498223 F6X3S4 739 aa14.54□□□□□ -0.08
CTTN-208ENST00000498223 NEXNQ0ZGT2 675 aa14.54□□□□□ -0.08
CTTN-208ENST00000498223 HSP90AB3PQ58FF7 597 aa14.54□□□□□ -0.08
CTTN-208ENST00000498223 ZKSCAN2Q63HK3 967 aa14.54□□□□□ -0.08
CTTN-208ENST00000498223 DNAAF4Q8WXU2 420 aa14.54□□□□□ -0.08
CTTN-208ENST00000498223 MYD88Q99836 296 aa14.54□□□□□ -0.08
CTTN-208ENST00000498223 API5Q9BZZ5 524 aaKnown RBP14.54□□□□□ -0.08
CTTN-208ENST00000498223 NPHP1O15259 732 aa14.53□□□□□ -0.08
CTTN-208ENST00000498223 GYS1P13807 737 aa14.53□□□□□ -0.08
CTTN-208ENST00000498223 BRPF1P55201 1214 aaPredicted RBP14.53□□□□□ -0.08
CTTN-208ENST00000498223 GPR162Q16538 588 aa14.53□□□□□ -0.08
CTTN-208ENST00000498223 GIGYF2Q6Y7W6 1299 aaKnown RBP14.53□□□□□ -0.08
CTTN-208ENST00000498223 NLGN1Q8N2Q7 840 aa14.53□□□□□ -0.08
CTTN-208ENST00000498223 FAM177BA6PVY3 158 aa14.52□□□□□ -0.09
CTTN-208ENST00000498223 GPTP24298 496 aa14.52□□□□□ -0.09
CTTN-208ENST00000498223 TCIRG1Q13488 830 aa14.52□□□□□ -0.09
CTTN-208ENST00000498223 FKBP8Q14318 412 aa14.52□□□□□ -0.09
CTTN-208ENST00000498223 TBC1D9BQ66K14 1250 aa14.52□□□□□ -0.09
CTTN-208ENST00000498223 CLEC4GQ6UXB4 293 aa14.52□□□□□ -0.09
CTTN-208ENST00000498223 FTSJ3Q8IY81 847 aaKnown RBP14.52□□□□□ -0.09
CTTN-208ENST00000498223 NLGN2Q8NFZ4 835 aa14.52□□□□□ -0.09
CTTN-208ENST00000498223 SETDB2Q96T68 719 aa14.52□□□□□ -0.09
CTTN-208ENST00000498223 METTL22Q9BUU2 404 aaPredicted RBP14.52□□□□□ -0.09
CTTN-208ENST00000498223 BCL2L12Q9HB09 334 aa14.52□□□□□ -0.09
CTTN-208ENST00000498223 NIP7Q9Y221 180 aaKnown RBP eCLIP14.52□□□□□ -0.09
CTTN-208ENST00000498223 ADCY9O60503 1353 aa14.51□□□□□ -0.09
CTTN-208ENST00000498223 ATP5J2-PTCD1G3V325 749 aa14.51□□□□□ -0.09
CTTN-208ENST00000498223 PLIN1O60240 522 aa14.51□□□□□ -0.09
CTTN-208ENST00000498223 ATF7IPQ6VMQ6 1270 aa14.51□□□□□ -0.09
CTTN-208ENST00000498223 ARHGAP45Q92619 1136 aa14.51□□□□□ -0.09
CTTN-208ENST00000498223 CLUAP1Q96AJ1 413 aa14.51□□□□□ -0.09
CTTN-208ENST00000498223 PARP3Q9Y6F1 533 aa14.51□□□□□ -0.09
CTTN-208ENST00000498223 N4BP2Q86UW6 1770 aaPredicted RBP14.51□□□□□ -0.09
CTTN-208ENST00000498223 MS4A1P11836 297 aa14.5□□□□□ -0.09
CTTN-208ENST00000498223 ZNF784Q8NCA9 323 aaPredicted RBP14.5□□□□□ -0.09
CTTN-208ENST00000498223 RGL2O15211 777 aa14.49□□□□□ -0.09
CTTN-208ENST00000498223 MMP10P09238 476 aa14.49□□□□□ -0.09
CTTN-208ENST00000498223 TRIM27P14373 513 aa14.49□□□□□ -0.09
CTTN-208ENST00000498223 GTF2E1P29083 439 aaPredicted RBP14.49□□□□□ -0.09
CTTN-208ENST00000498223 NFIXQ14938 502 aa14.49□□□□□ -0.09
CTTN-208ENST00000498223 SUPT16HQ9Y5B9 1047 aaKnown RBP14.49□□□□□ -0.09
CTTN-208ENST00000498223 CWF19L2Q2TBE0 894 aaKnown RBP14.48□□□□□ -0.09
CTTN-208ENST00000498223 PARP10Q53GL7 1025 aa14.48□□□□□ -0.09
CTTN-208ENST00000498223 PPP1R42Q7Z4L9 355 aa14.48□□□□□ -0.09
CTTN-208ENST00000498223 DZIP1LQ8IYY4 767 aaKnown RBP14.48□□□□□ -0.09
CTTN-208ENST00000498223 ZNF34Q8IZ26 560 aa14.48□□□□□ -0.09
CTTN-208ENST00000498223 PELP1Q8IZL8 1130 aaKnown RBP14.48□□□□□ -0.09
CTTN-208ENST00000498223 SRCIN1Q9C0H9 1055 aa14.48□□□□□ -0.09
CTTN-208ENST00000498223 TNNQ9UQP3 1299 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms