RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 ZNF541Q9H0D2 1346 aa9.51□□□□□ -0.89
FN1-225ENST00000494446 COL15A1P39059 1388 aa9.5□□□□□ -0.89
FN1-225ENST00000494446 ZNF530Q6P9A1 599 aaPredicted RBP9.5□□□□□ -0.89
FN1-225ENST00000494446 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
FN1-225ENST00000494446 PDZRN3Q9UPQ7 1066 aa9.5□□□□□ -0.89
FN1-225ENST00000494446 AKAP11Q9UKA4 1901 aa9.5□□□□□ -0.89
FN1-225ENST00000494446 RNF123Q5XPI4 1314 aa9.5□□□□□ -0.89
FN1-225ENST00000494446 WASHC2AQ641Q2 1341 aa9.5□□□□□ -0.89
FN1-225ENST00000494446 ST20-MTHFSA0A0A6YYL1 179 aa9.49□□□□□ -0.89
FN1-225ENST00000494446 CA12O43570 354 aa9.49□□□□□ -0.89
FN1-225ENST00000494446 MAP2K2P36507 400 aa9.49□□□□□ -0.89
FN1-225ENST00000494446 MTHFSP49914 203 aa9.49□□□□□ -0.89
FN1-225ENST00000494446 PLEKHO1Q53GL0 409 aaPredicted RBP9.49□□□□□ -0.89
FN1-225ENST00000494446 SOGA3Q5TF21 947 aa9.49□□□□□ -0.89
FN1-225ENST00000494446 CHRDL2Q6WN34 429 aa9.49□□□□□ -0.89
FN1-225ENST00000494446 BRIP1Q9BX63 1249 aa9.49□□□□□ -0.89
FN1-225ENST00000494446 CYP19A1P11511 503 aaPredicted RBP9.48□□□□□ -0.89
FN1-225ENST00000494446 PRPF40BQ6NWY9 871 aaKnown RBP9.48□□□□□ -0.89
FN1-225ENST00000494446 CNKSR1Q969H4 720 aa9.48□□□□□ -0.89
FN1-225ENST00000494446 TRAF5O00463 557 aa9.47□□□□□ -0.89
FN1-225ENST00000494446 NPHP1O15259 732 aa9.47□□□□□ -0.89
FN1-225ENST00000494446 C1orf141Q5JVX7 400 aa9.47□□□□□ -0.89
FN1-225ENST00000494446 CST9Q5W186 159 aa9.47□□□□□ -0.89
FN1-225ENST00000494446 PRR5LQ6MZQ0 368 aa9.47□□□□□ -0.89
FN1-225ENST00000494446 TESK2Q96S53 571 aa9.47□□□□□ -0.89
FN1-225ENST00000494446 ZNF277Q9NRM2 450 aaPredicted RBP9.47□□□□□ -0.89
FN1-225ENST00000494446 ZBTB1Q9Y2K1 713 aa9.47□□□□□ -0.89
FN1-225ENST00000494446 TLL2Q9Y6L7 1015 aa9.47□□□□□ -0.89
FN1-225ENST00000494446 CANXP27824 592 aaKnown RBP9.46□□□□□ -0.9
FN1-225ENST00000494446 EIF4A2Q14240 407 aaKnown RBP9.46□□□□□ -0.9
FN1-225ENST00000494446 TBC1D9BQ66K14 1250 aa9.46□□□□□ -0.9
FN1-225ENST00000494446 CIAPIN1Q6FI81 312 aa9.46□□□□□ -0.9
FN1-225ENST00000494446 STYK1Q6J9G0 422 aa9.46□□□□□ -0.9
FN1-225ENST00000494446 SCN7AQ01118 1682 aa9.45□□□□□ -0.9
FN1-225ENST00000494446 LMOD1P29536 600 aaPredicted RBP9.45□□□□□ -0.9
FN1-225ENST00000494446 BRPF1P55201 1214 aaPredicted RBP9.45□□□□□ -0.9
FN1-225ENST00000494446 FKBP4Q02790 459 aaKnown RBP eCLIP9.45□□□□□ -0.9
FN1-225ENST00000494446 AMOTQ4VCS5 1084 aa9.45□□□□□ -0.9
FN1-225ENST00000494446 CCDC93Q567U6 631 aa9.45□□□□□ -0.9
FN1-225ENST00000494446 GPC2Q8N158 579 aa9.45□□□□□ -0.9
FN1-225ENST00000494446 MASTLQ96GX5 879 aa9.45□□□□□ -0.9
FN1-225ENST00000494446 GJA3Q9Y6H8 435 aa9.45□□□□□ -0.9
FN1-225ENST00000494446 SRGNP10124 158 aa9.44□□□□□ -0.9
FN1-225ENST00000494446 POLKQ9UBT6 870 aa9.44□□□□□ -0.9
FN1-225ENST00000494446 BCORQ6W2J9 1755 aa9.44□□□□□ -0.9
FN1-225ENST00000494446 POLR2AP24928 1970 aaKnown RBP9.44□□□□□ -0.9
FN1-225ENST00000494446 A0A087WZG4 1122 aa9.43□□□□□ -0.9
FN1-225ENST00000494446 FZD9O00144 591 aa9.43□□□□□ -0.9
FN1-225ENST00000494446 SLC24A1O60721 1099 aa9.43□□□□□ -0.9
FN1-225ENST00000494446 IARSP41252 1262 aaKnown RBP9.43□□□□□ -0.9
FN1-225ENST00000494446 EPS15P42566 896 aa9.43□□□□□ -0.9
FN1-225ENST00000494446 ST5P78524 1137 aa9.43□□□□□ -0.9
FN1-225ENST00000494446 SLC39A6Q13433 755 aa9.43□□□□□ -0.9
FN1-225ENST00000494446 OLFM4Q6UX06 510 aa9.43□□□□□ -0.9
FN1-225ENST00000494446 SAPCD2Q86UD0 394 aa9.43□□□□□ -0.9
FN1-225ENST00000494446 CNBD1Q8NA66 436 aa9.43□□□□□ -0.9
FN1-225ENST00000494446 C7orf43Q8WVR3 580 aa9.43□□□□□ -0.9
FN1-225ENST00000494446 GCC1Q96CN9 775 aa9.43□□□□□ -0.9
FN1-225ENST00000494446 CARD14Q9BXL6 1004 aa9.43□□□□□ -0.9
FN1-225ENST00000494446 ZNF330Q9Y3S2 320 aaPredicted RBP9.43□□□□□ -0.9
FN1-225ENST00000494446 UBR2Q8IWV8 1755 aa9.42□□□□□ -0.9
FN1-225ENST00000494446 CELF2O95319 508 aaKnown RBP9.42□□□□□ -0.9
FN1-225ENST00000494446 TNNT2P45379 298 aaPredicted RBP9.42□□□□□ -0.9
FN1-225ENST00000494446 EIF6P56537 245 aaKnown RBP9.42□□□□□ -0.9
FN1-225ENST00000494446 SYNE4Q8N205 404 aa9.42□□□□□ -0.9
FN1-225ENST00000494446 NBPF15Q8N660 670 aa9.42□□□□□ -0.9
FN1-225ENST00000494446 JDP2Q8WYK2 163 aa9.42□□□□□ -0.9
FN1-225ENST00000494446 SETDB2Q96T68 719 aa9.42□□□□□ -0.9
FN1-225ENST00000494446 TBC1D2BQ9UPU7 963 aa9.42□□□□□ -0.9
FN1-225ENST00000494446 HABP4Q5JVS0 413 aaKnown RBP9.41□□□□□ -0.9
FN1-225ENST00000494446 RTKN2Q8IZC4 609 aa9.41□□□□□ -0.9
FN1-225ENST00000494446 ZIC5Q96T25 663 aa9.41□□□□□ -0.9
FN1-225ENST00000494446 ZNF408Q9H9D4 720 aa9.41□□□□□ -0.9
FN1-225ENST00000494446 SLC4A2P04920 1241 aa9.4□□□□□ -0.9
FN1-225ENST00000494446 NPR1P16066 1061 aa9.4□□□□□ -0.9
FN1-225ENST00000494446 EIF5P55010 431 aaKnown RBP9.4□□□□□ -0.9
FN1-225ENST00000494446 USP50Q70EL3 339 aaPredicted RBP9.4□□□□□ -0.9
FN1-225ENST00000494446 AEBP1Q8IUX7 1158 aa9.4□□□□□ -0.9
FN1-225ENST00000494446 SP7Q8TDD2 431 aaPredicted RBP9.4□□□□□ -0.9
FN1-225ENST00000494446 SLC52A2Q9HAB3 445 aa9.4□□□□□ -0.9
FN1-225ENST00000494446 STARD3NLO95772 234 aa9.39□□□□□ -0.91
FN1-225ENST00000494446 SCNN1DP51172 638 aa9.39□□□□□ -0.91
FN1-225ENST00000494446 NOGQ13253 232 aa9.39□□□□□ -0.91
FN1-225ENST00000494446 HHIPL1Q96JK4 782 aa9.39□□□□□ -0.91
FN1-225ENST00000494446 GLIS2Q9BZE0 524 aaPredicted RBP9.39□□□□□ -0.91
FN1-225ENST00000494446 LGR6Q9HBX8 967 aa9.39□□□□□ -0.91
FN1-225ENST00000494446 COL4A5P29400 1685 aa9.39□□□□□ -0.91
FN1-225ENST00000494446 VSIG10Q8N0Z9 540 aa9.38□□□□□ -0.91
FN1-225ENST00000494446 TRPA1O75762 1119 aa9.37□□□□□ -0.91
FN1-225ENST00000494446 AKAP4Q5JQC9 854 aa9.37□□□□□ -0.91
FN1-225ENST00000494446 CTU1Q7Z7A3 348 aaKnown RBP9.37□□□□□ -0.91
FN1-225ENST00000494446 NPM2Q86SE8 214 aaKnown RBP9.37□□□□□ -0.91
FN1-225ENST00000494446 NBPF5PQ86XG9 351 aaPredicted RBP9.37□□□□□ -0.91
FN1-225ENST00000494446 HPS5Q9UPZ3 1129 aa9.37□□□□□ -0.91
FN1-225ENST00000494446 MRC1P22897 1456 aa9.36□□□□□ -0.91
FN1-225ENST00000494446 RNMTO43148 476 aaKnown RBP9.36□□□□□ -0.91
FN1-225ENST00000494446 HUNKP57058 714 aa9.36□□□□□ -0.91
FN1-225ENST00000494446 SULT6B1Q6IMI4 303 aa9.36□□□□□ -0.91
FN1-225ENST00000494446 LARGE2Q8N3Y3 721 aa9.36□□□□□ -0.91
FN1-225ENST00000494446 ADARB2Q9NS39 739 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms