RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CLEC4GQ6UXB4 293 aa17.49■□□□□ 0.39
COL1A1-208ENST00000494334 BICDL1Q6ZP65 573 aa17.49■□□□□ 0.39
COL1A1-208ENST00000494334 COPS6Q7L5N1 327 aa17.49■□□□□ 0.39
COL1A1-208ENST00000494334 CDCA7LQ96GN5 454 aa17.49■□□□□ 0.39
COL1A1-208ENST00000494334 ERVV-1B6SEH8 477 aa17.48■□□□□ 0.39
COL1A1-208ENST00000494334 RGL2O15211 777 aa17.48■□□□□ 0.39
COL1A1-208ENST00000494334 VAMP4O75379 141 aa17.48■□□□□ 0.39
COL1A1-208ENST00000494334 CCDC30Q5VVM6 783 aa17.48■□□□□ 0.39
COL1A1-208ENST00000494334 KIF6Q6ZMV9 814 aa17.48■□□□□ 0.39
COL1A1-208ENST00000494334 KLHL34Q8N239 644 aa17.48■□□□□ 0.39
COL1A1-208ENST00000494334 XAGE3Q8WTP9 111 aa17.48■□□□□ 0.39
COL1A1-208ENST00000494334 CHMP4AQ9BY43 222 aa17.48■□□□□ 0.39
COL1A1-208ENST00000494334 MAP3K15Q6ZN16 1313 aa17.47■□□□□ 0.39
COL1A1-208ENST00000494334 HNRNPUQ00839 825 aaKnown RBP eCLIP17.47■□□□□ 0.39
COL1A1-208ENST00000494334 AIMP1Q12904 312 aaKnown RBP17.47■□□□□ 0.39
COL1A1-208ENST00000494334 HYPKQ9NX55 129 aa17.47■□□□□ 0.39
COL1A1-208ENST00000494334 ZNF652Q9Y2D9 606 aa17.47■□□□□ 0.39
COL1A1-208ENST00000494334 ZBTB3Q9H5J0 574 aa17.46■□□□□ 0.39
COL1A1-208ENST00000494334 CD2APQ9Y5K6 639 aa17.46■□□□□ 0.39
COL1A1-208ENST00000494334 TCERG1O14776 1098 aaKnown RBP17.45■□□□□ 0.38
COL1A1-208ENST00000494334 SERPINB2P05120 415 aa17.45■□□□□ 0.38
COL1A1-208ENST00000494334 TRMT2AQ8IZ69 625 aaKnown RBP17.45■□□□□ 0.38
COL1A1-208ENST00000494334 SETDB2Q96T68 719 aa17.45■□□□□ 0.38
COL1A1-208ENST00000494334 PHAXQ9H814 394 aaKnown RBP17.45■□□□□ 0.38
COL1A1-208ENST00000494334 SCN7AQ01118 1682 aa17.45■□□□□ 0.38
COL1A1-208ENST00000494334 GIGYF2Q6Y7W6 1299 aaKnown RBP17.44■□□□□ 0.38
COL1A1-208ENST00000494334 NLGN2Q8NFZ4 835 aa17.44■□□□□ 0.38
COL1A1-208ENST00000494334 NIP7Q9Y221 180 aaKnown RBP eCLIP17.43■□□□□ 0.38
COL1A1-208ENST00000494334 BCORQ6W2J9 1755 aa17.43■□□□□ 0.38
COL1A1-208ENST00000494334 CARMIL3Q8ND23 1372 aa17.42■□□□□ 0.38
COL1A1-208ENST00000494334 ANKRD13DQ6ZTN6 518 aa17.42■□□□□ 0.38
COL1A1-208ENST00000494334 STK31Q9BXU1 1019 aa17.42■□□□□ 0.38
COL1A1-208ENST00000494334 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
COL1A1-208ENST00000494334 ZNF34Q8IZ26 560 aa17.41■□□□□ 0.38
COL1A1-208ENST00000494334 PLBD2Q8NHP8 589 aa17.41■□□□□ 0.38
COL1A1-208ENST00000494334 C10orf71Q711Q0 1435 aa17.4■□□□□ 0.38
COL1A1-208ENST00000494334 PRR5LQ6MZQ0 368 aa17.4■□□□□ 0.38
COL1A1-208ENST00000494334 ATP10DQ9P241 1426 aa17.39■□□□□ 0.38
COL1A1-208ENST00000494334 GPTP24298 496 aa17.39■□□□□ 0.37
COL1A1-208ENST00000494334 TGFB2P61812 414 aa17.39■□□□□ 0.37
COL1A1-208ENST00000494334 TCIRG1Q13488 830 aa17.39■□□□□ 0.37
COL1A1-208ENST00000494334 G2E3Q7L622 706 aa17.39■□□□□ 0.37
COL1A1-208ENST00000494334 CCDC24Q8N4L8 307 aa17.39■□□□□ 0.37
COL1A1-208ENST00000494334 FAM177BA6PVY3 158 aa17.38■□□□□ 0.37
COL1A1-208ENST00000494334 HSP90AB3PQ58FF7 597 aa17.38■□□□□ 0.37
COL1A1-208ENST00000494334 RIC3Q7Z5B4 369 aa17.38■□□□□ 0.37
COL1A1-208ENST00000494334 NBPF5PQ86XG9 351 aaPredicted RBP17.38■□□□□ 0.37
COL1A1-208ENST00000494334 UBN2Q6ZU65 1347 aa17.38■□□□□ 0.37
COL1A1-208ENST00000494334 SUSD4Q5VX71 490 aa17.37■□□□□ 0.37
COL1A1-208ENST00000494334 TPTE2Q6XPS3 522 aa17.37■□□□□ 0.37
COL1A1-208ENST00000494334 CNBD1Q8NA66 436 aa17.37■□□□□ 0.37
COL1A1-208ENST00000494334 NRXN2Q9P2S2 1712 aa17.37■□□□□ 0.37
COL1A1-208ENST00000494334 ZBED9Q6R2W3 1325 aa17.37■□□□□ 0.37
COL1A1-208ENST00000494334 A0A0G2JLW4 131 aa17.36■□□□□ 0.37
COL1A1-208ENST00000494334 NPHP1O15259 732 aa17.36■□□□□ 0.37
COL1A1-208ENST00000494334 DDX58O95786 925 aaKnown RBP17.36■□□□□ 0.37
COL1A1-208ENST00000494334 FLIIQ13045 1269 aa17.36■□□□□ 0.37
COL1A1-208ENST00000494334 PARP10Q53GL7 1025 aa17.36■□□□□ 0.37
COL1A1-208ENST00000494334 NUP98P52948 1817 aa17.35■□□□□ 0.37
COL1A1-208ENST00000494334 AFDNP55196 1824 aaKnown RBP17.35■□□□□ 0.37
COL1A1-208ENST00000494334 DPEP1P16444 411 aa17.35■□□□□ 0.37
COL1A1-208ENST00000494334 ST5P78524 1137 aa17.35■□□□□ 0.37
COL1A1-208ENST00000494334 KSR2Q6VAB6 950 aa17.35■□□□□ 0.37
COL1A1-208ENST00000494334 ISCA1Q9BUE6 129 aa17.35■□□□□ 0.37
COL1A1-208ENST00000494334 BRIP1Q9BX63 1249 aa17.35■□□□□ 0.37
COL1A1-208ENST00000494334 PXDNLA1KZ92 1463 aa17.35■□□□□ 0.37
COL1A1-208ENST00000494334 PI4KAP2A4QPH2 592 aa17.34■□□□□ 0.37
COL1A1-208ENST00000494334 ATP5J2-PTCD1G3V325 749 aa17.34■□□□□ 0.37
COL1A1-208ENST00000494334 KCNA3P22001 575 aa17.34■□□□□ 0.37
COL1A1-208ENST00000494334 CHRNA5P30532 468 aa17.34■□□□□ 0.37
COL1A1-208ENST00000494334 PPP1R42Q7Z4L9 355 aa17.34■□□□□ 0.37
COL1A1-208ENST00000494334 NLRP10Q86W26 655 aa17.34■□□□□ 0.37
COL1A1-208ENST00000494334 NUTM1Q86Y26 1132 aa17.34■□□□□ 0.37
COL1A1-208ENST00000494334 PI4KAP1Q8N8J0 262 aa17.34■□□□□ 0.37
COL1A1-208ENST00000494334 NYXQ9GZU5 481 aa17.34■□□□□ 0.37
COL1A1-208ENST00000494334 MAP3K2Q9Y2U5 619 aa17.34■□□□□ 0.37
COL1A1-208ENST00000494334 KIF13BQ9NQT8 1826 aa17.33■□□□□ 0.37
COL1A1-208ENST00000494334 NTSR2O95665 410 aa17.33■□□□□ 0.36
COL1A1-208ENST00000494334 CT47B1P0C2W7 299 aaPredicted RBP17.33■□□□□ 0.36
COL1A1-208ENST00000494334 GTF2E1P29083 439 aaPredicted RBP17.33■□□□□ 0.36
COL1A1-208ENST00000494334 ZNF428Q96B54 188 aa17.33■□□□□ 0.36
COL1A1-208ENST00000494334 MYD88Q99836 296 aa17.33■□□□□ 0.36
COL1A1-208ENST00000494334 METTL22Q9BUU2 404 aaPredicted RBP17.33■□□□□ 0.36
COL1A1-208ENST00000494334 UTP14AQ9BVJ6 771 aaKnown RBP17.33■□□□□ 0.36
COL1A1-208ENST00000494334 ADCY9O60503 1353 aa17.32■□□□□ 0.36
COL1A1-208ENST00000494334 IBTKQ9P2D0 1353 aaPredicted RBP17.32■□□□□ 0.36
COL1A1-208ENST00000494334 PDE6BP35913 854 aa17.32■□□□□ 0.36
COL1A1-208ENST00000494334 TRIM28Q13263 835 aaKnown RBP17.32■□□□□ 0.36
COL1A1-208ENST00000494334 FKBP5Q13451 457 aaPredicted RBP17.32■□□□□ 0.36
COL1A1-208ENST00000494334 ERFEQ4G0M1 354 aa17.32■□□□□ 0.36
COL1A1-208ENST00000494334 MRPL50Q8N5N7 158 aaKnown RBP17.32■□□□□ 0.36
COL1A1-208ENST00000494334 SSH1Q8WYL5 1049 aa17.32■□□□□ 0.36
COL1A1-208ENST00000494334 WWC3Q9ULE0 1092 aa17.32■□□□□ 0.36
COL1A1-208ENST00000494334 GPR162Q16538 588 aa17.31■□□□□ 0.36
COL1A1-208ENST00000494334 C2CD5Q86YS7 1000 aa17.31■□□□□ 0.36
COL1A1-208ENST00000494334 PELP1Q8IZL8 1130 aaKnown RBP17.31■□□□□ 0.36
COL1A1-208ENST00000494334 KLRG2A4D1S0 409 aaPredicted RBP17.3■□□□□ 0.36
COL1A1-208ENST00000494334 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
COL1A1-208ENST00000494334 H0YIN7 160 aa17.3■□□□□ 0.36
COL1A1-208ENST00000494334 YBX3P16989 372 aaKnown RBP eCLIP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms