RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 TNS4Q8IZW8 715 aa18.43■□□□□ 0.54
SAMM50-204ENST00000493161 PDZRN3Q9UPQ7 1066 aa18.43■□□□□ 0.54
SAMM50-204ENST00000493161 DICER1Q9UPY3 1922 aaKnown RBP18.43■□□□□ 0.54
SAMM50-204ENST00000493161 NPC1L1Q9UHC9 1359 aa18.42■□□□□ 0.54
SAMM50-204ENST00000493161 PRPF40BQ6NWY9 871 aaKnown RBP18.42■□□□□ 0.54
SAMM50-204ENST00000493161 DZIP3Q86Y13 1208 aaKnown RBP18.42■□□□□ 0.54
SAMM50-204ENST00000493161 TAOK3Q9H2K8 898 aa18.42■□□□□ 0.54
SAMM50-204ENST00000493161 BCORQ6W2J9 1755 aa18.42■□□□□ 0.54
SAMM50-204ENST00000493161 CACNA1SQ13698 1873 aa18.41■□□□□ 0.54
SAMM50-204ENST00000493161 STYK1Q6J9G0 422 aa18.41■□□□□ 0.54
SAMM50-204ENST00000493161 RSPH6AQ9H0K4 717 aa18.41■□□□□ 0.54
SAMM50-204ENST00000493161 LTBP3Q9NS15 1303 aa18.41■□□□□ 0.54
SAMM50-204ENST00000493161 NPHP1O15259 732 aa18.4■□□□□ 0.54
SAMM50-204ENST00000493161 ST5P78524 1137 aa18.4■□□□□ 0.54
SAMM50-204ENST00000493161 CNKSR1Q969H4 720 aa18.4■□□□□ 0.54
SAMM50-204ENST00000493161 CHADLQ6NUI6 762 aa18.39■□□□□ 0.53
SAMM50-204ENST00000493161 MCM10Q7L590 875 aa18.39■□□□□ 0.53
SAMM50-204ENST00000493161 NPM2Q86SE8 214 aaKnown RBP18.39■□□□□ 0.53
SAMM50-204ENST00000493161 MASTLQ96GX5 879 aa18.39■□□□□ 0.53
SAMM50-204ENST00000493161 OLFM4Q6UX06 510 aa18.38■□□□□ 0.53
SAMM50-204ENST00000493161 C7orf43Q8WVR3 580 aa18.38■□□□□ 0.53
SAMM50-204ENST00000493161 NBPF26B4DH59 902 aa18.37■□□□□ 0.53
SAMM50-204ENST00000493161 DCTN1Q14203 1278 aa18.37■□□□□ 0.53
SAMM50-204ENST00000493161 NBPF10Q6P3W6 841 aaKnown RBP18.37■□□□□ 0.53
SAMM50-204ENST00000493161 NBPF5PQ86XG9 351 aaPredicted RBP18.37■□□□□ 0.53
SAMM50-204ENST00000493161 NBPF15Q8N660 670 aa18.37■□□□□ 0.53
SAMM50-204ENST00000493161 MKRN1Q9UHC7 482 aaKnown RBP18.37■□□□□ 0.53
SAMM50-204ENST00000493161 ARFGEF2Q9Y6D5 1785 aa18.37■□□□□ 0.53
SAMM50-204ENST00000493161 FAM177BA6PVY3 158 aa18.35■□□□□ 0.53
SAMM50-204ENST00000493161 SNRPA1P09661 255 aaKnown RBP18.35■□□□□ 0.53
SAMM50-204ENST00000493161 CREBZFQ9NS37 354 aa18.35■□□□□ 0.53
SAMM50-204ENST00000493161 CLEC4GQ6UXB4 293 aa18.34■□□□□ 0.53
SAMM50-204ENST00000493161 ZNF277Q9NRM2 450 aaPredicted RBP18.34■□□□□ 0.53
SAMM50-204ENST00000493161 ZNF541Q9H0D2 1346 aa18.33■□□□□ 0.53
SAMM50-204ENST00000493161 KLRG2A4D1S0 409 aaPredicted RBP18.33■□□□□ 0.52
SAMM50-204ENST00000493161 U2AF1L5P0DN76 240 aaPredicted RBP18.33■□□□□ 0.52
SAMM50-204ENST00000493161 NPR1P16066 1061 aa18.33■□□□□ 0.52
SAMM50-204ENST00000493161 U2AF1Q01081 240 aaKnown RBP eCLIP18.33■□□□□ 0.52
SAMM50-204ENST00000493161 HLFQ16534 295 aa18.33■□□□□ 0.52
SAMM50-204ENST00000493161 CCDC93Q567U6 631 aa18.33■□□□□ 0.52
SAMM50-204ENST00000493161 SOGA3Q5TF21 947 aa18.33■□□□□ 0.52
SAMM50-204ENST00000493161 CFAP53Q96M91 514 aa18.33■□□□□ 0.52
SAMM50-204ENST00000493161 TAF1DQ9H5J8 278 aaPredicted RBP18.33■□□□□ 0.52
SAMM50-204ENST00000493161 NIP7Q9Y221 180 aaKnown RBP eCLIP18.33■□□□□ 0.52
SAMM50-204ENST00000493161 L3MBTL3Q96JM7 780 aaPredicted RBP18.32■□□□□ 0.52
SAMM50-204ENST00000493161 MIS18AQ9NYP9 233 aa18.32■□□□□ 0.52
SAMM50-204ENST00000493161 PASKQ96RG2 1323 aa18.31■□□□□ 0.52
SAMM50-204ENST00000493161 PPP2R1AP30153 589 aa18.31■□□□□ 0.52
SAMM50-204ENST00000493161 FKBP4Q02790 459 aaKnown RBP eCLIP18.31■□□□□ 0.52
SAMM50-204ENST00000493161 RTF1Q92541 710 aaKnown RBP18.31■□□□□ 0.52
SAMM50-204ENST00000493161 ZNF652Q9Y2D9 606 aa18.31■□□□□ 0.52
SAMM50-204ENST00000493161 TPTE2Q6XPS3 522 aa18.3■□□□□ 0.52
SAMM50-204ENST00000493161 LDHDQ86WU2 507 aa18.3■□□□□ 0.52
SAMM50-204ENST00000493161 NUDCQ9Y266 331 aa18.3■□□□□ 0.52
SAMM50-204ENST00000493161 IQCA1LA6NCM1 817 aa18.29■□□□□ 0.52
SAMM50-204ENST00000493161 ITGBL1O95965 494 aaPredicted RBP18.29■□□□□ 0.52
SAMM50-204ENST00000493161 CNTNAP1P78357 1384 aa18.29■□□□□ 0.52
SAMM50-204ENST00000493161 FOXN1O15353 648 aa18.28■□□□□ 0.52
SAMM50-204ENST00000493161 EAPPQ56P03 285 aaPredicted RBP18.28■□□□□ 0.52
SAMM50-204ENST00000493161 SCN4AP35499 1836 aa18.28■□□□□ 0.52
SAMM50-204ENST00000493161 SLC51AQ86UW1 340 aa18.27■□□□□ 0.52
SAMM50-204ENST00000493161 SYNE4Q8N205 404 aa18.27■□□□□ 0.52
SAMM50-204ENST00000493161 NGEFQ8N5V2 710 aa18.27■□□□□ 0.52
SAMM50-204ENST00000493161 ABCC12Q96J65 1359 aa18.27■□□□□ 0.51
SAMM50-204ENST00000493161 VEGFBP49765 207 aa18.26■□□□□ 0.51
SAMM50-204ENST00000493161 TAF7Q15545 349 aaPredicted RBP18.26■□□□□ 0.51
SAMM50-204ENST00000493161 NUTM1Q86Y26 1132 aa18.26■□□□□ 0.51
SAMM50-204ENST00000493161 RTKN2Q8IZC4 609 aa18.26■□□□□ 0.51
SAMM50-204ENST00000493161 HACL1Q9UJ83 578 aa18.26■□□□□ 0.51
SAMM50-204ENST00000493161 RNF123Q5XPI4 1314 aa18.25■□□□□ 0.51
SAMM50-204ENST00000493161 SNED1Q8TER0 1413 aa18.25■□□□□ 0.51
SAMM50-204ENST00000493161 ADAMTSL1Q8N6G6 1762 aa18.25■□□□□ 0.51
SAMM50-204ENST00000493161 FZD9O00144 591 aa18.25■□□□□ 0.51
SAMM50-204ENST00000493161 RGL2O15211 777 aa18.25■□□□□ 0.51
SAMM50-204ENST00000493161 HTATSF1O43719 755 aaKnown RBP18.25■□□□□ 0.51
SAMM50-204ENST00000493161 EPHX2P34913 555 aa18.25■□□□□ 0.51
SAMM50-204ENST00000493161 IARSP41252 1262 aaKnown RBP18.25■□□□□ 0.51
SAMM50-204ENST00000493161 CLEC11AQ9Y240 323 aa18.25■□□□□ 0.51
SAMM50-204ENST00000493161 COL4A5P29400 1685 aa18.25■□□□□ 0.51
SAMM50-204ENST00000493161 TMEM88BA6NKF7 163 aa18.24■□□□□ 0.51
SAMM50-204ENST00000493161 GTF2E1P29083 439 aaPredicted RBP18.24■□□□□ 0.51
SAMM50-204ENST00000493161 ALDH1B1P30837 517 aa18.24■□□□□ 0.51
SAMM50-204ENST00000493161 TTLL7Q6ZT98 887 aa18.24■□□□□ 0.51
SAMM50-204ENST00000493161 LAMB4A4D0S4 1761 aa18.23■□□□□ 0.51
SAMM50-204ENST00000493161 CRY2Q49AN0 593 aa18.23■□□□□ 0.51
SAMM50-204ENST00000493161 MAP1SQ66K74 1059 aaPredicted RBP18.23■□□□□ 0.51
SAMM50-204ENST00000493161 THUMPD2Q9BTF0 503 aaKnown RBP18.22■□□□□ 0.51
SAMM50-204ENST00000493161 RRP7AQ9Y3A4 280 aaKnown RBP18.22■□□□□ 0.51
SAMM50-204ENST00000493161 GPTP24298 496 aa18.21■□□□□ 0.51
SAMM50-204ENST00000493161 CNTROBQ8N137 903 aa18.21■□□□□ 0.51
SAMM50-204ENST00000493161 UBN2Q6ZU65 1347 aa18.21■□□□□ 0.51
SAMM50-204ENST00000493161 KDM3BQ7LBC6 1761 aa18.2■□□□□ 0.5
SAMM50-204ENST00000493161 ERVV-1B6SEH8 477 aa18.2■□□□□ 0.5
SAMM50-204ENST00000493161 MYL6BP14649 208 aa18.2■□□□□ 0.5
SAMM50-204ENST00000493161 EIF4A1P60842 406 aaKnown RBP18.2■□□□□ 0.5
SAMM50-204ENST00000493161 FMR1Q06787 632 aaKnown RBP eCLIP18.2■□□□□ 0.5
SAMM50-204ENST00000493161 GPC2Q8N158 579 aa18.2■□□□□ 0.5
SAMM50-204ENST00000493161 PSMD1Q99460 953 aa18.2■□□□□ 0.5
SAMM50-204ENST00000493161 LTBP1Q14766 1721 aa18.2■□□□□ 0.5
SAMM50-204ENST00000493161 MAP3K15Q6ZN16 1313 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms