RNA–Protein interactions for RNA: ENST00000493007.1

PITPNB-210, Transcript of phosphatidylinositol transfer protein beta, humanhuman

TSL 3

Gene PITPNB, Length 564 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNB-210ENST00000493007 COL5A3P25940 1745 aaPredicted RBP11.83□□□□□ -0.52
PITPNB-210ENST00000493007 COL15A1P39059 1388 aa11.82□□□□□ -0.52
PITPNB-210ENST00000493007 TUBGCP6Q96RT7 1819 aa11.82□□□□□ -0.52
PITPNB-210ENST00000493007 A0A087WZG4 1122 aa11.82□□□□□ -0.52
PITPNB-210ENST00000493007 PIP4K2AP48426 406 aaPredicted RBP11.82□□□□□ -0.52
PITPNB-210ENST00000493007 MBIPQ9NS73 344 aa11.82□□□□□ -0.52
PITPNB-210ENST00000493007 UBR3Q6ZT12 1888 aa11.82□□□□□ -0.52
PITPNB-210ENST00000493007 USP42Q9H9J4 1324 aaKnown RBP11.82□□□□□ -0.52
PITPNB-210ENST00000493007 MYH14Q7Z406 1995 aaKnown RBP11.81□□□□□ -0.52
PITPNB-210ENST00000493007 USPL1Q5W0Q7 1092 aa11.81□□□□□ -0.52
PITPNB-210ENST00000493007 RASEFQ8IZ41 740 aa11.81□□□□□ -0.52
PITPNB-210ENST00000493007 NGEFQ8N5V2 710 aa11.81□□□□□ -0.52
PITPNB-210ENST00000493007 NARFQ9UHQ1 456 aa11.81□□□□□ -0.52
PITPNB-210ENST00000493007 NBPF26B4DH59 902 aa11.8□□□□□ -0.52
PITPNB-210ENST00000493007 MMP10P09238 476 aa11.8□□□□□ -0.52
PITPNB-210ENST00000493007 EIF2S2P20042 333 aaKnown RBP11.8□□□□□ -0.52
PITPNB-210ENST00000493007 KRT24Q2M2I5 525 aa11.8□□□□□ -0.52
PITPNB-210ENST00000493007 NBPF10Q6P3W6 841 aaKnown RBP11.8□□□□□ -0.52
PITPNB-210ENST00000493007 NBPF15Q8N660 670 aa11.8□□□□□ -0.52
PITPNB-210ENST00000493007 FHDC1Q9C0D6 1143 aaPredicted RBP11.8□□□□□ -0.52
PITPNB-210ENST00000493007 TBC1D2BQ9UPU7 963 aa11.8□□□□□ -0.52
PITPNB-210ENST00000493007 DZIP3Q86Y13 1208 aaKnown RBP11.79□□□□□ -0.52
PITPNB-210ENST00000493007 WDR63Q8IWG1 891 aa11.79□□□□□ -0.52
PITPNB-210ENST00000493007 SYT17Q9BSW7 474 aa11.79□□□□□ -0.52
PITPNB-210ENST00000493007 IL16Q14005 1332 aa11.79□□□□□ -0.52
PITPNB-210ENST00000493007 KDM3BQ7LBC6 1761 aa11.79□□□□□ -0.52
PITPNB-210ENST00000493007 MYL6BP14649 208 aa11.78□□□□□ -0.52
PITPNB-210ENST00000493007 KLHL34Q8N239 644 aa11.78□□□□□ -0.52
PITPNB-210ENST00000493007 NECTIN2Q92692 538 aa11.78□□□□□ -0.52
PITPNB-210ENST00000493007 BCL2L12Q9HB09 334 aa11.78□□□□□ -0.52
PITPNB-210ENST00000493007 ELL2O00472 640 aaPredicted RBP11.77□□□□□ -0.53
PITPNB-210ENST00000493007 CAMTA2O94983 1202 aa11.77□□□□□ -0.53
PITPNB-210ENST00000493007 HOXB7P09629 217 aa11.77□□□□□ -0.53
PITPNB-210ENST00000493007 TM4SF1P30408 202 aa11.77□□□□□ -0.53
PITPNB-210ENST00000493007 DUSP27Q5VZP5 1158 aa11.77□□□□□ -0.53
PITPNB-210ENST00000493007 TSR2Q969E8 191 aaKnown RBP11.77□□□□□ -0.53
PITPNB-210ENST00000493007 MS4A3Q96HJ5 214 aa11.77□□□□□ -0.53
PITPNB-210ENST00000493007 PARP3Q9Y6F1 533 aa11.77□□□□□ -0.53
PITPNB-210ENST00000493007 ERBB4Q15303 1308 aa11.77□□□□□ -0.53
PITPNB-210ENST00000493007 VASPP50552 380 aaPredicted RBP11.76□□□□□ -0.53
PITPNB-210ENST00000493007 PDIA6Q15084 440 aa11.76□□□□□ -0.53
PITPNB-210ENST00000493007 HDGFL1Q5TGJ6 251 aa11.76□□□□□ -0.53
PITPNB-210ENST00000493007 C8orf58Q8NAV2 365 aa11.76□□□□□ -0.53
PITPNB-210ENST00000493007 POLRMTO00411 1230 aaKnown RBP11.75□□□□□ -0.53
PITPNB-210ENST00000493007 NUBP1P53384 320 aa11.75□□□□□ -0.53
PITPNB-210ENST00000493007 DDR1Q08345 913 aa11.75□□□□□ -0.53
PITPNB-210ENST00000493007 NFIXQ14938 502 aa11.75□□□□□ -0.53
PITPNB-210ENST00000493007 CLEC4GQ6UXB4 293 aa11.75□□□□□ -0.53
PITPNB-210ENST00000493007 BICDL1Q6ZP65 573 aa11.75□□□□□ -0.53
PITPNB-210ENST00000493007 DDX21Q9NR30 783 aaKnown RBP eCLIP11.75□□□□□ -0.53
PITPNB-210ENST00000493007 CD2APQ9Y5K6 639 aa11.75□□□□□ -0.53
PITPNB-210ENST00000493007 ANXA1P04083 346 aa11.74□□□□□ -0.53
PITPNB-210ENST00000493007 PROSER3Q2NL68 480 aa11.74□□□□□ -0.53
PITPNB-210ENST00000493007 TBC1D9BQ66K14 1250 aa11.74□□□□□ -0.53
PITPNB-210ENST00000493007 TTLL7Q6ZT98 887 aa11.74□□□□□ -0.53
PITPNB-210ENST00000493007 LRP10Q7Z4F1 713 aa11.74□□□□□ -0.53
PITPNB-210ENST00000493007 TSPYL6Q8N831 410 aa11.74□□□□□ -0.53
PITPNB-210ENST00000493007 CHMP4AQ9BY43 222 aa11.74□□□□□ -0.53
PITPNB-210ENST00000493007 CHPF2Q9P2E5 772 aa11.74□□□□□ -0.53
PITPNB-210ENST00000493007 DBF4Q9UBU7 674 aaPredicted RBP11.74□□□□□ -0.53
PITPNB-210ENST00000493007 ZNF652Q9Y2D9 606 aa11.74□□□□□ -0.53
PITPNB-210ENST00000493007 ZNF521Q96K83 1311 aa11.74□□□□□ -0.53
PITPNB-210ENST00000493007 COL24A1Q17RW2 1714 aa11.74□□□□□ -0.53
PITPNB-210ENST00000493007 ERVV-1B6SEH8 477 aa11.73□□□□□ -0.53
PITPNB-210ENST00000493007 RGL2O15211 777 aa11.73□□□□□ -0.53
PITPNB-210ENST00000493007 SERPINB2P05120 415 aa11.73□□□□□ -0.53
PITPNB-210ENST00000493007 GOLGA2Q08379 1002 aa11.73□□□□□ -0.53
PITPNB-210ENST00000493007 KIF6Q6ZMV9 814 aa11.73□□□□□ -0.53
PITPNB-210ENST00000493007 NLGN2Q8NFZ4 835 aa11.73□□□□□ -0.53
PITPNB-210ENST00000493007 FAM212AQ96EL1 285 aa11.73□□□□□ -0.53
PITPNB-210ENST00000493007 SETDB2Q96T68 719 aa11.73□□□□□ -0.53
PITPNB-210ENST00000493007 MYH16Q9H6N6 1097 aa11.73□□□□□ -0.53
PITPNB-210ENST00000493007 FANCIQ9NVI1 1328 aa11.73□□□□□ -0.53
PITPNB-210ENST00000493007 C4AP0C0L4 1744 aa11.72□□□□□ -0.53
PITPNB-210ENST00000493007 MAP3K15Q6ZN16 1313 aa11.72□□□□□ -0.53
PITPNB-210ENST00000493007 AIMP1Q12904 312 aaKnown RBP11.72□□□□□ -0.53
PITPNB-210ENST00000493007 HLFQ16534 295 aa11.72□□□□□ -0.53
PITPNB-210ENST00000493007 TWISTNBQ3B726 338 aaPredicted RBP11.72□□□□□ -0.53
PITPNB-210ENST00000493007 COPS6Q7L5N1 327 aa11.72□□□□□ -0.53
PITPNB-210ENST00000493007 XAGE3Q8WTP9 111 aa11.72□□□□□ -0.53
PITPNB-210ENST00000493007 KIF12Q96FN5 646 aa11.72□□□□□ -0.53
PITPNB-210ENST00000493007 EXOSC9Q06265 439 aaKnown RBP11.71□□□□□ -0.53
PITPNB-210ENST00000493007 CCDC30Q5VVM6 783 aa11.71□□□□□ -0.53
PITPNB-210ENST00000493007 ZBTB3Q9H5J0 574 aa11.71□□□□□ -0.53
PITPNB-210ENST00000493007 HYPKQ9NX55 129 aa11.71□□□□□ -0.53
PITPNB-210ENST00000493007 CARMIL3Q8ND23 1372 aa11.7□□□□□ -0.54
PITPNB-210ENST00000493007 LAMB4A4D0S4 1761 aa11.7□□□□□ -0.54
PITPNB-210ENST00000493007 TGFB2P61812 414 aa11.7□□□□□ -0.54
PITPNB-210ENST00000493007 GIGYF2Q6Y7W6 1299 aaKnown RBP11.7□□□□□ -0.54
PITPNB-210ENST00000493007 NIP7Q9Y221 180 aaKnown RBP eCLIP11.7□□□□□ -0.54
PITPNB-210ENST00000493007 E9PSI1 815 aa11.69□□□□□ -0.54
PITPNB-210ENST00000493007 PHAXQ9H814 394 aaKnown RBP11.69□□□□□ -0.54
PITPNB-210ENST00000493007 C10orf71Q711Q0 1435 aa11.69□□□□□ -0.54
PITPNB-210ENST00000493007 A0A0G2JLW4 131 aa11.68□□□□□ -0.54
PITPNB-210ENST00000493007 FAM177BA6PVY3 158 aa11.68□□□□□ -0.54
PITPNB-210ENST00000493007 TCERG1O14776 1098 aaKnown RBP11.68□□□□□ -0.54
PITPNB-210ENST00000493007 NPHP1O15259 732 aa11.68□□□□□ -0.54
PITPNB-210ENST00000493007 MAP3K13O43283 966 aa11.68□□□□□ -0.54
PITPNB-210ENST00000493007 VAMP4O75379 141 aa11.68□□□□□ -0.54
PITPNB-210ENST00000493007 SLFN5Q08AF3 891 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms