RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 ERVV-1B6SEH8 477 aa9.36□□□□□ -0.91
PDLIM1-204ENST00000492511 RGL2O15211 777 aa9.36□□□□□ -0.91
PDLIM1-204ENST00000492511 HOXB7P09629 217 aa9.36□□□□□ -0.91
PDLIM1-204ENST00000492511 CHRNA5P30532 468 aa9.36□□□□□ -0.91
PDLIM1-204ENST00000492511 CALD1Q05682 793 aaKnown RBP9.36□□□□□ -0.91
PDLIM1-204ENST00000492511 IFFO2Q5TF58 517 aa9.36□□□□□ -0.91
PDLIM1-204ENST00000492511 PRR5LQ6MZQ0 368 aa9.36□□□□□ -0.91
PDLIM1-204ENST00000492511 NPM2Q86SE8 214 aaKnown RBP9.36□□□□□ -0.91
PDLIM1-204ENST00000492511 CCDC24Q8N4L8 307 aa9.36□□□□□ -0.91
PDLIM1-204ENST00000492511 TSPYL6Q8N831 410 aa9.36□□□□□ -0.91
PDLIM1-204ENST00000492511 TSR2Q969E8 191 aaKnown RBP9.36□□□□□ -0.91
PDLIM1-204ENST00000492511 SETDB2Q96T68 719 aa9.36□□□□□ -0.91
PDLIM1-204ENST00000492511 SPINK5Q9NQ38 1064 aaPredicted RBP9.36□□□□□ -0.91
PDLIM1-204ENST00000492511 KIAA1551Q9HCM1 1747 aa9.36□□□□□ -0.91
PDLIM1-204ENST00000492511 MAP3K15Q6ZN16 1313 aa9.35□□□□□ -0.91
PDLIM1-204ENST00000492511 ELL2O00472 640 aaPredicted RBP9.35□□□□□ -0.91
PDLIM1-204ENST00000492511 COPS6Q7L5N1 327 aa9.35□□□□□ -0.91
PDLIM1-204ENST00000492511 WDR63Q8IWG1 891 aa9.35□□□□□ -0.91
PDLIM1-204ENST00000492511 DDX21Q9NR30 783 aaKnown RBP eCLIP9.35□□□□□ -0.91
PDLIM1-204ENST00000492511 CHPF2Q9P2E5 772 aa9.35□□□□□ -0.91
PDLIM1-204ENST00000492511 NRXN2Q9P2S2 1712 aa9.35□□□□□ -0.91
PDLIM1-204ENST00000492511 SCN7AQ01118 1682 aa9.35□□□□□ -0.91
PDLIM1-204ENST00000492511 LAMB4A4D0S4 1761 aa9.35□□□□□ -0.91
PDLIM1-204ENST00000492511 IL16Q14005 1332 aa9.34□□□□□ -0.91
PDLIM1-204ENST00000492511 KIF13BQ9NQT8 1826 aa9.34□□□□□ -0.91
PDLIM1-204ENST00000492511 CCER2I3L3R5 266 aa9.34□□□□□ -0.91
PDLIM1-204ENST00000492511 HDGFL1Q5TGJ6 251 aa9.34□□□□□ -0.91
PDLIM1-204ENST00000492511 ZNF34Q8IZ26 560 aa9.34□□□□□ -0.91
PDLIM1-204ENST00000492511 XAGE3Q8WTP9 111 aa9.34□□□□□ -0.91
PDLIM1-204ENST00000492511 ZBTB3Q9H5J0 574 aa9.34□□□□□ -0.91
PDLIM1-204ENST00000492511 NIP7Q9Y221 180 aaKnown RBP eCLIP9.34□□□□□ -0.91
PDLIM1-204ENST00000492511 ZNF652Q9Y2D9 606 aa9.34□□□□□ -0.91
PDLIM1-204ENST00000492511 UBN2Q6ZU65 1347 aa9.33□□□□□ -0.92
PDLIM1-204ENST00000492511 ZNF521Q96K83 1311 aa9.33□□□□□ -0.92
PDLIM1-204ENST00000492511 BCORQ6W2J9 1755 aa9.33□□□□□ -0.92
PDLIM1-204ENST00000492511 AIMP1Q12904 312 aaKnown RBP9.33□□□□□ -0.92
PDLIM1-204ENST00000492511 GIGYF2Q6Y7W6 1299 aaKnown RBP9.33□□□□□ -0.92
PDLIM1-204ENST00000492511 KIF6Q6ZMV9 814 aa9.33□□□□□ -0.92
PDLIM1-204ENST00000492511 MIER1Q8N108 512 aa9.33□□□□□ -0.92
PDLIM1-204ENST00000492511 BRIP1Q9BX63 1249 aa9.33□□□□□ -0.92
PDLIM1-204ENST00000492511 PIM2Q9P1W9 311 aa9.33□□□□□ -0.92
PDLIM1-204ENST00000492511 DBF4Q9UBU7 674 aaPredicted RBP9.33□□□□□ -0.92
PDLIM1-204ENST00000492511 BCS1LQ9Y276 419 aa9.33□□□□□ -0.92
PDLIM1-204ENST00000492511 KLRG2A4D1S0 409 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1-204ENST00000492511 FAM177BA6PVY3 158 aa9.32□□□□□ -0.92
PDLIM1-204ENST00000492511 GPTP24298 496 aa9.32□□□□□ -0.92
PDLIM1-204ENST00000492511 SUSD4Q5VX71 490 aa9.32□□□□□ -0.92
PDLIM1-204ENST00000492511 DIEXFQ68CQ4 756 aaKnown RBP9.32□□□□□ -0.92
PDLIM1-204ENST00000492511 NBPF5PQ86XG9 351 aaPredicted RBP9.32□□□□□ -0.92
PDLIM1-204ENST00000492511 C2CD5Q86YS7 1000 aa9.32□□□□□ -0.92
PDLIM1-204ENST00000492511 CNBD1Q8NA66 436 aa9.32□□□□□ -0.92
PDLIM1-204ENST00000492511 PHAXQ9H814 394 aaKnown RBP9.32□□□□□ -0.92
PDLIM1-204ENST00000492511 FANCIQ9NVI1 1328 aa9.31□□□□□ -0.92
PDLIM1-204ENST00000492511 ATP10DQ9P241 1426 aa9.31□□□□□ -0.92
PDLIM1-204ENST00000492511 AFDNP55196 1824 aaKnown RBP9.31□□□□□ -0.92
PDLIM1-204ENST00000492511 H0YIN7 160 aa9.31□□□□□ -0.92
PDLIM1-204ENST00000492511 DALRD3Q5D0E6 543 aaKnown RBP9.31□□□□□ -0.92
PDLIM1-204ENST00000492511 TPTE2Q6XPS3 522 aa9.31□□□□□ -0.92
PDLIM1-204ENST00000492511 N4BP2Q86UW6 1770 aaPredicted RBP9.31□□□□□ -0.92
PDLIM1-204ENST00000492511 CEP350Q5VT06 3117 aa9.3□□□□□ -0.92
PDLIM1-204ENST00000492511 TCERG1O14776 1098 aaKnown RBP9.3□□□□□ -0.92
PDLIM1-204ENST00000492511 VAMP4O75379 141 aa9.3□□□□□ -0.92
PDLIM1-204ENST00000492511 NTSR2O95665 410 aa9.3□□□□□ -0.92
PDLIM1-204ENST00000492511 SRGNP10124 158 aa9.3□□□□□ -0.92
PDLIM1-204ENST00000492511 PDE6BP35913 854 aa9.3□□□□□ -0.92
PDLIM1-204ENST00000492511 ST5P78524 1137 aa9.3□□□□□ -0.92
PDLIM1-204ENST00000492511 EXOSC9Q06265 439 aaKnown RBP9.3□□□□□ -0.92
PDLIM1-204ENST00000492511 TCIRG1Q13488 830 aa9.3□□□□□ -0.92
PDLIM1-204ENST00000492511 TWISTNBQ3B726 338 aaPredicted RBP9.3□□□□□ -0.92
PDLIM1-204ENST00000492511 ERFEQ4G0M1 354 aa9.3□□□□□ -0.92
PDLIM1-204ENST00000492511 ANKRD13DQ6ZTN6 518 aa9.3□□□□□ -0.92
PDLIM1-204ENST00000492511 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
PDLIM1-204ENST00000492511 PLBD2Q8NHP8 589 aa9.3□□□□□ -0.92
PDLIM1-204ENST00000492511 GPBP1L1Q9HC44 474 aaPredicted RBP9.3□□□□□ -0.92
PDLIM1-204ENST00000492511 HYPKQ9NX55 129 aa9.3□□□□□ -0.92
PDLIM1-204ENST00000492511 ABCC12Q96J65 1359 aa9.29□□□□□ -0.92
PDLIM1-204ENST00000492511 CCDC30Q5VVM6 783 aa9.29□□□□□ -0.92
PDLIM1-204ENST00000492511 NLRP10Q86W26 655 aa9.29□□□□□ -0.92
PDLIM1-204ENST00000492511 SYNE4Q8N205 404 aa9.29□□□□□ -0.92
PDLIM1-204ENST00000492511 TTLL6Q8N841 843 aa9.29□□□□□ -0.92
PDLIM1-204ENST00000492511 ISCA1Q9BUE6 129 aa9.29□□□□□ -0.92
PDLIM1-204ENST00000492511 IBTKQ9P2D0 1353 aaPredicted RBP9.28□□□□□ -0.92
PDLIM1-204ENST00000492511 GOLGA2Q08379 1002 aa9.28□□□□□ -0.92
PDLIM1-204ENST00000492511 SLC10A5Q5PT55 438 aa9.28□□□□□ -0.92
PDLIM1-204ENST00000492511 ARHGAP27Q6ZUM4 889 aa9.28□□□□□ -0.92
PDLIM1-204ENST00000492511 C3orf67Q6ZVT6 689 aa9.28□□□□□ -0.92
PDLIM1-204ENST00000492511 G2E3Q7L622 706 aa9.28□□□□□ -0.92
PDLIM1-204ENST00000492511 ZNF622Q969S3 477 aaKnown RBP eCLIP9.28□□□□□ -0.92
PDLIM1-204ENST00000492511 ZNF428Q96B54 188 aa9.28□□□□□ -0.92
PDLIM1-204ENST00000492511 NYXQ9GZU5 481 aa9.28□□□□□ -0.92
PDLIM1-204ENST00000492511 PDZRN3Q9UPQ7 1066 aa9.28□□□□□ -0.92
PDLIM1-204ENST00000492511 ANKRD31Q8N7Z5 1873 aa9.28□□□□□ -0.92
PDLIM1-204ENST00000492511 ATP5J2-PTCD1G3V325 749 aa9.27□□□□□ -0.93
PDLIM1-204ENST00000492511 NPHP1O15259 732 aa9.27□□□□□ -0.93
PDLIM1-204ENST00000492511 PRELPP51888 382 aa9.27□□□□□ -0.93
PDLIM1-204ENST00000492511 CRY2Q49AN0 593 aa9.27□□□□□ -0.93
PDLIM1-204ENST00000492511 PARP10Q53GL7 1025 aa9.27□□□□□ -0.93
PDLIM1-204ENST00000492511 HSP90AB3PQ58FF7 597 aa9.27□□□□□ -0.93
PDLIM1-204ENST00000492511 STYK1Q6J9G0 422 aa9.27□□□□□ -0.93
PDLIM1-204ENST00000492511 C7orf43Q8WVR3 580 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms