RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 CHMP4AQ9BY43 222 aa17.51■□□□□ 0.39
DNMT3A-214ENST00000491288 NMRK2Q9NPI5 230 aa17.51■□□□□ 0.39
DNMT3A-214ENST00000491288 KDM3BQ7LBC6 1761 aa17.51■□□□□ 0.39
DNMT3A-214ENST00000491288 NRXN2Q9P2S2 1712 aa17.5■□□□□ 0.39
DNMT3A-214ENST00000491288 ARFGEF1Q9Y6D6 1849 aa17.49■□□□□ 0.39
DNMT3A-214ENST00000491288 SERPINB2P05120 415 aa17.49■□□□□ 0.39
DNMT3A-214ENST00000491288 MYH16Q9H6N6 1097 aa17.48■□□□□ 0.39
DNMT3A-214ENST00000491288 HOXB7P09629 217 aa17.47■□□□□ 0.39
DNMT3A-214ENST00000491288 APLP1P51693 650 aa17.47■□□□□ 0.39
DNMT3A-214ENST00000491288 GOLGA2Q08379 1002 aa17.47■□□□□ 0.39
DNMT3A-214ENST00000491288 DUSP27Q5VZP5 1158 aa17.47■□□□□ 0.39
DNMT3A-214ENST00000491288 DNAJC5GQ8N7S2 189 aa17.47■□□□□ 0.39
DNMT3A-214ENST00000491288 RBM46Q8TBY0 533 aaKnown RBP17.47■□□□□ 0.39
DNMT3A-214ENST00000491288 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
DNMT3A-214ENST00000491288 ELL2O00472 640 aaPredicted RBP17.46■□□□□ 0.39
DNMT3A-214ENST00000491288 MYL6BP14649 208 aa17.46■□□□□ 0.39
DNMT3A-214ENST00000491288 PIP4K2AP48426 406 aaPredicted RBP17.46■□□□□ 0.39
DNMT3A-214ENST00000491288 RNF181Q9P0P0 153 aa17.46■□□□□ 0.39
DNMT3A-214ENST00000491288 TBC1D2BQ9UPU7 963 aa17.46■□□□□ 0.39
DNMT3A-214ENST00000491288 ERBB4Q15303 1308 aa17.46■□□□□ 0.38
DNMT3A-214ENST00000491288 CARMIL3Q8ND23 1372 aa17.45■□□□□ 0.38
DNMT3A-214ENST00000491288 PRELPP51888 382 aa17.45■□□□□ 0.38
DNMT3A-214ENST00000491288 IFFO2Q5TF58 517 aa17.45■□□□□ 0.38
DNMT3A-214ENST00000491288 DZIP3Q86Y13 1208 aaKnown RBP17.45■□□□□ 0.38
DNMT3A-214ENST00000491288 NECTIN2Q92692 538 aa17.45■□□□□ 0.38
DNMT3A-214ENST00000491288 TSR2Q969E8 191 aaKnown RBP17.45■□□□□ 0.38
DNMT3A-214ENST00000491288 KDM2BQ8NHM5 1336 aa17.45■□□□□ 0.38
DNMT3A-214ENST00000491288 NBPF26B4DH59 902 aa17.44■□□□□ 0.38
DNMT3A-214ENST00000491288 KRT24Q2M2I5 525 aa17.44■□□□□ 0.38
DNMT3A-214ENST00000491288 HDGFL1Q5TGJ6 251 aa17.44■□□□□ 0.38
DNMT3A-214ENST00000491288 NBPF10Q6P3W6 841 aaKnown RBP17.44■□□□□ 0.38
DNMT3A-214ENST00000491288 NBPF15Q8N660 670 aa17.44■□□□□ 0.38
DNMT3A-214ENST00000491288 TTLL6Q8N841 843 aa17.44■□□□□ 0.38
DNMT3A-214ENST00000491288 FSTL1Q12841 308 aa17.43■□□□□ 0.38
DNMT3A-214ENST00000491288 TBC1D9BQ66K14 1250 aa17.43■□□□□ 0.38
DNMT3A-214ENST00000491288 LMNB1P20700 586 aa17.42■□□□□ 0.38
DNMT3A-214ENST00000491288 KIF6Q6ZMV9 814 aa17.42■□□□□ 0.38
DNMT3A-214ENST00000491288 C8orf58Q8NAV2 365 aa17.42■□□□□ 0.38
DNMT3A-214ENST00000491288 BRIP1Q9BX63 1249 aa17.42■□□□□ 0.38
DNMT3A-214ENST00000491288 DBF4Q9UBU7 674 aaPredicted RBP17.42■□□□□ 0.38
DNMT3A-214ENST00000491288 PDZRN3Q9UPQ7 1066 aa17.42■□□□□ 0.38
DNMT3A-214ENST00000491288 ZNF652Q9Y2D9 606 aa17.42■□□□□ 0.38
DNMT3A-214ENST00000491288 H0YIN7 160 aa17.41■□□□□ 0.38
DNMT3A-214ENST00000491288 NFKBIEO00221 500 aa17.41■□□□□ 0.38
DNMT3A-214ENST00000491288 CAMTA2O94983 1202 aa17.41■□□□□ 0.38
DNMT3A-214ENST00000491288 HNRNPUQ00839 825 aaKnown RBP eCLIP17.41■□□□□ 0.38
DNMT3A-214ENST00000491288 CCDC30Q5VVM6 783 aa17.41■□□□□ 0.38
DNMT3A-214ENST00000491288 PRR5LQ6MZQ0 368 aa17.41■□□□□ 0.38
DNMT3A-214ENST00000491288 C2CD5Q86YS7 1000 aa17.41■□□□□ 0.38
DNMT3A-214ENST00000491288 DDX21Q9NR30 783 aaKnown RBP eCLIP17.41■□□□□ 0.38
DNMT3A-214ENST00000491288 AFDNP55196 1824 aaKnown RBP17.4■□□□□ 0.38
DNMT3A-214ENST00000491288 E9PSI1 815 aa17.4■□□□□ 0.38
DNMT3A-214ENST00000491288 RASSF7Q02833 373 aa17.4■□□□□ 0.38
DNMT3A-214ENST00000491288 TWISTNBQ3B726 338 aaPredicted RBP17.4■□□□□ 0.38
DNMT3A-214ENST00000491288 LAMB4A4D0S4 1761 aa17.4■□□□□ 0.38
DNMT3A-214ENST00000491288 CLEC4GQ6UXB4 293 aa17.39■□□□□ 0.37
DNMT3A-214ENST00000491288 BICDL1Q6ZP65 573 aa17.39■□□□□ 0.37
DNMT3A-214ENST00000491288 STK31Q9BXU1 1019 aa17.39■□□□□ 0.37
DNMT3A-214ENST00000491288 RRAGCQ9HB90 399 aa17.39■□□□□ 0.37
DNMT3A-214ENST00000491288 HYPKQ9NX55 129 aa17.39■□□□□ 0.37
DNMT3A-214ENST00000491288 FANCIQ9NVI1 1328 aa17.39■□□□□ 0.37
DNMT3A-214ENST00000491288 DLEC1Q9Y238 1755 aa17.38■□□□□ 0.37
DNMT3A-214ENST00000491288 GLTPD2A6NH11 291 aa17.38■□□□□ 0.37
DNMT3A-214ENST00000491288 RGL2O15211 777 aa17.38■□□□□ 0.37
DNMT3A-214ENST00000491288 PDE6BP35913 854 aa17.38■□□□□ 0.37
DNMT3A-214ENST00000491288 EXOSC9Q06265 439 aaKnown RBP17.38■□□□□ 0.37
DNMT3A-214ENST00000491288 AIMP1Q12904 312 aaKnown RBP17.38■□□□□ 0.37
DNMT3A-214ENST00000491288 PDIA6Q15084 440 aa17.38■□□□□ 0.37
DNMT3A-214ENST00000491288 CHPF2Q9P2E5 772 aa17.38■□□□□ 0.37
DNMT3A-214ENST00000491288 ZNF521Q96K83 1311 aa17.38■□□□□ 0.37
DNMT3A-214ENST00000491288 SCN7AQ01118 1682 aa17.37■□□□□ 0.37
DNMT3A-214ENST00000491288 ERVV-1B6SEH8 477 aa17.37■□□□□ 0.37
DNMT3A-214ENST00000491288 COPS6Q7L5N1 327 aa17.37■□□□□ 0.37
DNMT3A-214ENST00000491288 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
DNMT3A-214ENST00000491288 TSPYL6Q8N831 410 aa17.37■□□□□ 0.37
DNMT3A-214ENST00000491288 SETDB2Q96T68 719 aa17.37■□□□□ 0.37
DNMT3A-214ENST00000491288 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
DNMT3A-214ENST00000491288 SBF1O95248 1867 aa17.36■□□□□ 0.37
DNMT3A-214ENST00000491288 NPHP1O15259 732 aa17.36■□□□□ 0.37
DNMT3A-214ENST00000491288 ANXA1P04083 346 aa17.36■□□□□ 0.37
DNMT3A-214ENST00000491288 SLFN5Q08AF3 891 aa17.36■□□□□ 0.37
DNMT3A-214ENST00000491288 TTLL7Q6ZT98 887 aa17.35■□□□□ 0.37
DNMT3A-214ENST00000491288 JMYQ8N9B5 988 aa17.35■□□□□ 0.37
DNMT3A-214ENST00000491288 XAGE3Q8WTP9 111 aa17.35■□□□□ 0.37
DNMT3A-214ENST00000491288 ZBTB3Q9H5J0 574 aa17.35■□□□□ 0.37
DNMT3A-214ENST00000491288 MAP3K15Q6ZN16 1313 aa17.35■□□□□ 0.37
DNMT3A-214ENST00000491288 LTBP3Q9NS15 1303 aa17.35■□□□□ 0.37
DNMT3A-214ENST00000491288 KLRG2A4D1S0 409 aaPredicted RBP17.34■□□□□ 0.37
DNMT3A-214ENST00000491288 POTECB2RU33 542 aa17.34■□□□□ 0.37
DNMT3A-214ENST00000491288 VAMP4O75379 141 aa17.34■□□□□ 0.37
DNMT3A-214ENST00000491288 SRGNP10124 158 aa17.34■□□□□ 0.37
DNMT3A-214ENST00000491288 VEGFAP15692 232 aaPredicted RBP17.34■□□□□ 0.37
DNMT3A-214ENST00000491288 PROSER3Q2NL68 480 aa17.34■□□□□ 0.37
DNMT3A-214ENST00000491288 CNBD1Q8NA66 436 aa17.34■□□□□ 0.37
DNMT3A-214ENST00000491288 SMC1BQ8NDV3 1235 aa17.34■□□□□ 0.37
DNMT3A-214ENST00000491288 DDX58O95786 925 aaKnown RBP17.33■□□□□ 0.36
DNMT3A-214ENST00000491288 SLC4A2P04920 1241 aa17.33■□□□□ 0.36
DNMT3A-214ENST00000491288 STYK1Q6J9G0 422 aa17.33■□□□□ 0.36
DNMT3A-214ENST00000491288 ANKRD13DQ6ZTN6 518 aa17.33■□□□□ 0.36
DNMT3A-214ENST00000491288 KLRG1Q96E93 195 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms