RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 GIMAP6Q6P9H5 292 aa23.18■■□□□ 1.3
SNAPC3-206ENST00000490969 NFAT5O94916 1531 aa23.18■■□□□ 1.3
SNAPC3-206ENST00000490969 LTN1O94822 1766 aa23.18■■□□□ 1.3
SNAPC3-206ENST00000490969 KLHL34Q8N239 644 aa23.18■■□□□ 1.3
SNAPC3-206ENST00000490969 A0A0U1RQG5 324 aaPredicted RBP23.17■■□□□ 1.3
SNAPC3-206ENST00000490969 UNC5CLQ8IV45 518 aa23.17■■□□□ 1.3
SNAPC3-206ENST00000490969 USHBP1Q8N6Y0 703 aa23.17■■□□□ 1.3
SNAPC3-206ENST00000490969 CTIFO43310 598 aaKnown RBP23.17■■□□□ 1.3
SNAPC3-206ENST00000490969 FIBPO43427 364 aa23.17■■□□□ 1.3
SNAPC3-206ENST00000490969 EPB41L2O43491 1005 aaKnown RBP23.17■■□□□ 1.3
SNAPC3-206ENST00000490969 STX6O43752 255 aa23.17■■□□□ 1.3
SNAPC3-206ENST00000490969 G2E3Q7L622 706 aa23.17■■□□□ 1.3
SNAPC3-206ENST00000490969 IL25Q9H293 177 aa23.17■■□□□ 1.3
SNAPC3-206ENST00000490969 STAP2Q9UGK3 403 aa23.17■■□□□ 1.3
SNAPC3-206ENST00000490969 TRPM3Q9HCF6 1732 aaPredicted RBP23.17■■□□□ 1.3
SNAPC3-206ENST00000490969 SYT1P21579 422 aa23.16■■□□□ 1.3
SNAPC3-206ENST00000490969 U2AF2P26368 475 aaKnown RBP eCLIP23.16■■□□□ 1.3
SNAPC3-206ENST00000490969 F13A1P00488 732 aa23.15■■□□□ 1.3
SNAPC3-206ENST00000490969 IGSF1Q8N6C5 1336 aa23.15■■□□□ 1.3
SNAPC3-206ENST00000490969 GCP02774 474 aa23.15■■□□□ 1.3
SNAPC3-206ENST00000490969 SPC24Q8NBT2 197 aa23.15■■□□□ 1.3
SNAPC3-206ENST00000490969 ATP6V1DQ9Y5K8 247 aa23.15■■□□□ 1.3
SNAPC3-206ENST00000490969 GOLGA6L6A8MZA4 724 aa23.14■■□□□ 1.3
SNAPC3-206ENST00000490969 ARHGEF10O15013 1369 aa23.13■■□□□ 1.29
SNAPC3-206ENST00000490969 PNMA6EA0A0J9YXQ4 647 aa23.13■■□□□ 1.29
SNAPC3-206ENST00000490969 MTHFSDQ2M296 383 aaKnown RBP23.13■■□□□ 1.29
SNAPC3-206ENST00000490969 TTC14Q96N46 770 aa23.12■■□□□ 1.29
SNAPC3-206ENST00000490969 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.12■■□□□ 1.29
SNAPC3-206ENST00000490969 KDRP35968 1356 aa23.12■■□□□ 1.29
SNAPC3-206ENST00000490969 CADPS2Q86UW7 1296 aa23.11■■□□□ 1.29
SNAPC3-206ENST00000490969 IP6K1Q92551 441 aa23.11■■□□□ 1.29
SNAPC3-206ENST00000490969 SMC3Q9UQE7 1217 aa23.11■■□□□ 1.29
SNAPC3-206ENST00000490969 AK2P54819 239 aa23.11■■□□□ 1.29
SNAPC3-206ENST00000490969 ATP8B2P98198 1209 aa23.11■■□□□ 1.29
SNAPC3-206ENST00000490969 CABLES1Q8TDN4 633 aa23.11■■□□□ 1.29
SNAPC3-206ENST00000490969 FEZ1Q99689 392 aa23.11■■□□□ 1.29
SNAPC3-206ENST00000490969 AOX1Q06278 1338 aa23.1■■□□□ 1.29
SNAPC3-206ENST00000490969 LRRC59Q96AG4 307 aaKnown RBP23.1■■□□□ 1.29
SNAPC3-206ENST00000490969 LIMCH1Q9UPQ0 1083 aa23.1■■□□□ 1.29
SNAPC3-206ENST00000490969 SNX14Q9Y5W7 946 aa23.1■■□□□ 1.29
SNAPC3-206ENST00000490969 CRB1P82279 1406 aa23.1■■□□□ 1.29
SNAPC3-206ENST00000490969 RAD50Q92878 1312 aa23.1■■□□□ 1.29
SNAPC3-206ENST00000490969 RUFY3Q7L099 469 aa23.1■■□□□ 1.29
SNAPC3-206ENST00000490969 AXIN2Q9Y2T1 843 aa23.1■■□□□ 1.29
SNAPC3-206ENST00000490969 CCDC192P0DO97 292 aa23.09■■□□□ 1.29
SNAPC3-206ENST00000490969 DCCP43146 1447 aa23.09■■□□□ 1.29
SNAPC3-206ENST00000490969 NBPF6Q5VWK0 638 aa23.09■■□□□ 1.29
SNAPC3-206ENST00000490969 NBPF4Q96M43 638 aa23.09■■□□□ 1.29
SNAPC3-206ENST00000490969 LARP6Q9BRS8 491 aaKnown RBP23.09■■□□□ 1.29
SNAPC3-206ENST00000490969 MIS18AQ9NYP9 233 aa23.09■■□□□ 1.29
SNAPC3-206ENST00000490969 RGPD2P0DJD1 1756 aa23.09■■□□□ 1.29
SNAPC3-206ENST00000490969 KIF1AQ12756 1690 aa23.09■■□□□ 1.29
SNAPC3-206ENST00000490969 GNAI3P08754 354 aa23.09■■□□□ 1.29
SNAPC3-206ENST00000490969 ARHGEF25Q86VW2 580 aa23.09■■□□□ 1.29
SNAPC3-206ENST00000490969 DNM1Q05193 864 aaKnown RBP23.08■■□□□ 1.29
SNAPC3-206ENST00000490969 ZC3H6P61129 1189 aaKnown RBP23.08■■□□□ 1.28
SNAPC3-206ENST00000490969 PTGS1P23219 599 aa23.07■■□□□ 1.28
SNAPC3-206ENST00000490969 NCBP1Q09161 790 aaKnown RBP23.07■■□□□ 1.28
SNAPC3-206ENST00000490969 KCNH5Q8NCM2 988 aa23.07■■□□□ 1.28
SNAPC3-206ENST00000490969 MED1Q15648 1581 aaPredicted RBP23.06■■□□□ 1.28
SNAPC3-206ENST00000490969 SGSM2O43147 1006 aa23.06■■□□□ 1.28
SNAPC3-206ENST00000490969 BRINP3Q76B58 766 aa23.06■■□□□ 1.28
SNAPC3-206ENST00000490969 OGFRQ9NZT2 677 aa23.06■■□□□ 1.28
SNAPC3-206ENST00000490969 ALS2Q96Q42 1657 aa23.06■■□□□ 1.28
SNAPC3-206ENST00000490969 RASEFQ8IZ41 740 aa23.06■■□□□ 1.28
SNAPC3-206ENST00000490969 FAM200AQ8TCP9 573 aa23.06■■□□□ 1.28
SNAPC3-206ENST00000490969 SLIT3O75094 1523 aa23.05■■□□□ 1.28
SNAPC3-206ENST00000490969 IGSF3O75054 1194 aa23.05■■□□□ 1.28
SNAPC3-206ENST00000490969 MTMR6Q9Y217 621 aa23.05■■□□□ 1.28
SNAPC3-206ENST00000490969 IL1RAPL2Q9NP60 686 aa23.05■■□□□ 1.28
SNAPC3-206ENST00000490969 SYCP1Q15431 976 aa23.04■■□□□ 1.28
SNAPC3-206ENST00000490969 LSG1Q9H089 658 aaKnown RBP23.04■■□□□ 1.28
SNAPC3-206ENST00000490969 TSPYL4Q9UJ04 414 aa23.04■■□□□ 1.28
SNAPC3-206ENST00000490969 MAP4K4O95819 1239 aaPredicted RBP23.04■■□□□ 1.28
SNAPC3-206ENST00000490969 GJB2P29033 226 aa23.04■■□□□ 1.28
SNAPC3-206ENST00000490969 NUTM1Q86Y26 1132 aa23.03■■□□□ 1.28
SNAPC3-206ENST00000490969 RTF1Q92541 710 aaKnown RBP23.03■■□□□ 1.28
SNAPC3-206ENST00000490969 LRRFIP2Q9Y608 721 aaKnown RBP23.03■■□□□ 1.28
SNAPC3-206ENST00000490969 LARGE1O95461 756 aa23.03■■□□□ 1.28
SNAPC3-206ENST00000490969 SMTNL1A8MU46 457 aa23.02■■□□□ 1.28
SNAPC3-206ENST00000490969 STK31Q9BXU1 1019 aa23.02■■□□□ 1.28
SNAPC3-206ENST00000490969 RGPD5Q99666 1765 aa23.02■■□□□ 1.28
SNAPC3-206ENST00000490969 CCDC83Q8IWF9 413 aa23.02■■□□□ 1.27
SNAPC3-206ENST00000490969 CTNNA3Q9UI47 895 aa23.02■■□□□ 1.27
SNAPC3-206ENST00000490969 CCDC186Q7Z3E2 898 aa23.01■■□□□ 1.27
SNAPC3-206ENST00000490969 C16orf45Q96MC5 204 aaPredicted RBP23.01■■□□□ 1.27
SNAPC3-206ENST00000490969 SLAIN2Q9P270 581 aa23.01■■□□□ 1.27
SNAPC3-206ENST00000490969 PXDNQ92626 1479 aa23.01■■□□□ 1.27
SNAPC3-206ENST00000490969 FLIIQ13045 1269 aa23.01■■□□□ 1.27
SNAPC3-206ENST00000490969 HYPKQ9NX55 129 aa23.01■■□□□ 1.27
SNAPC3-206ENST00000490969 MRVI1Q9Y6F6 885 aa23.01■■□□□ 1.27
SNAPC3-206ENST00000490969 SOS1Q07889 1333 aaPredicted RBP23■■□□□ 1.27
SNAPC3-206ENST00000490969 NPHP3Q7Z494 1330 aa23■■□□□ 1.27
SNAPC3-206ENST00000490969 CPA1P15085 419 aa23■■□□□ 1.27
SNAPC3-206ENST00000490969 CASTP20810 708 aaKnown RBP23■■□□□ 1.27
SNAPC3-206ENST00000490969 MAP3K11Q16584 847 aa23■■□□□ 1.27
SNAPC3-206ENST00000490969 TYRO3Q06418 890 aa23■■□□□ 1.27
SNAPC3-206ENST00000490969 LRMPQ12912 555 aa23■■□□□ 1.27
SNAPC3-206ENST00000490969 LUZP1Q86V48 1076 aa23■■□□□ 1.27
SNAPC3-206ENST00000490969 PI4K2BQ8TCG2 481 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms