RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-206ENST00000490101 HEG1Q9ULI3 1381 aa23.39■■□□□ 1.33
SRM-206ENST00000490101 KIF3CO14782 793 aa23.38■■□□□ 1.33
SRM-206ENST00000490101 C9orf131Q5VYM1 1079 aa23.38■■□□□ 1.33
SRM-206ENST00000490101 BICDL1Q6ZP65 573 aa23.38■■□□□ 1.33
SRM-206ENST00000490101 SUPT16HQ9Y5B9 1047 aaKnown RBP23.38■■□□□ 1.33
SRM-206ENST00000490101 SERPINB2P05120 415 aa23.37■■□□□ 1.33
SRM-206ENST00000490101 MIS18AQ9NYP9 233 aa23.37■■□□□ 1.33
SRM-206ENST00000490101 RNF123Q5XPI4 1314 aa23.36■■□□□ 1.33
SRM-206ENST00000490101 EIF5P55010 431 aaKnown RBP23.36■■□□□ 1.33
SRM-206ENST00000490101 A0A087WZG4 1122 aa23.35■■□□□ 1.33
SRM-206ENST00000490101 HSPA6P17066 643 aa23.35■■□□□ 1.33
SRM-206ENST00000490101 FMNL2Q96PY5 1086 aa23.35■■□□□ 1.33
SRM-206ENST00000490101 TEX13AQ9BXU3 409 aaPredicted RBP23.35■■□□□ 1.33
SRM-206ENST00000490101 NRXN2Q9P2S2 1712 aa23.34■■□□□ 1.33
SRM-206ENST00000490101 BTBD11A6QL63 1104 aa23.34■■□□□ 1.33
SRM-206ENST00000490101 KCNQ3O43525 872 aa23.34■■□□□ 1.33
SRM-206ENST00000490101 ZNF428Q96B54 188 aa23.34■■□□□ 1.33
SRM-206ENST00000490101 KDM3BQ7LBC6 1761 aa23.33■■□□□ 1.33
SRM-206ENST00000490101 C8orf58Q8NAV2 365 aa23.33■■□□□ 1.33
SRM-206ENST00000490101 NMRK2Q9NPI5 230 aa23.33■■□□□ 1.33
SRM-206ENST00000490101 RNF181Q9P0P0 153 aa23.33■■□□□ 1.33
SRM-206ENST00000490101 TBC1D2BQ9UPU7 963 aa23.33■■□□□ 1.33
SRM-206ENST00000490101 CARMIL3Q8ND23 1372 aa23.32■■□□□ 1.32
SRM-206ENST00000490101 RARSP54136 660 aaKnown RBP23.32■■□□□ 1.32
SRM-206ENST00000490101 VAMP4O75379 141 aa23.31■■□□□ 1.32
SRM-206ENST00000490101 A1BGP04217 495 aa23.31■■□□□ 1.32
SRM-206ENST00000490101 TBC1D9BQ66K14 1250 aa23.31■■□□□ 1.32
SRM-206ENST00000490101 NPM2Q86SE8 214 aaKnown RBP23.31■■□□□ 1.32
SRM-206ENST00000490101 TSPYL6Q8N831 410 aa23.31■■□□□ 1.32
SRM-206ENST00000490101 SCN7AQ01118 1682 aa23.31■■□□□ 1.32
SRM-206ENST00000490101 TWISTNBQ3B726 338 aaPredicted RBP23.3■■□□□ 1.32
SRM-206ENST00000490101 C2CD5Q86YS7 1000 aa23.3■■□□□ 1.32
SRM-206ENST00000490101 IL6STP40189 918 aaPredicted RBP23.29■■□□□ 1.32
SRM-206ENST00000490101 EIF4A1P60842 406 aaKnown RBP23.29■■□□□ 1.32
SRM-206ENST00000490101 RASSF7Q02833 373 aa23.29■■□□□ 1.32
SRM-206ENST00000490101 DLEC1Q9Y238 1755 aa23.28■■□□□ 1.32
SRM-206ENST00000490101 PIP4K2AP48426 406 aaPredicted RBP23.28■■□□□ 1.32
SRM-206ENST00000490101 ALDH1L2Q3SY69 923 aa23.28■■□□□ 1.32
SRM-206ENST00000490101 CCDC24Q8N4L8 307 aa23.28■■□□□ 1.32
SRM-206ENST00000490101 H0YIN7 160 aa23.27■■□□□ 1.32
SRM-206ENST00000490101 KRT24Q2M2I5 525 aa23.27■■□□□ 1.32
SRM-206ENST00000490101 TTLL6Q8N841 843 aa23.27■■□□□ 1.32
SRM-206ENST00000490101 PRAMEF22A3QJZ6 481 aa23.26■■□□□ 1.31
SRM-206ENST00000490101 ELL2O00472 640 aaPredicted RBP23.26■■□□□ 1.31
SRM-206ENST00000490101 TOMM70O94826 608 aa23.26■■□□□ 1.31
SRM-206ENST00000490101 RRP1P56182 461 aaKnown RBP23.26■■□□□ 1.31
SRM-206ENST00000490101 BCAR3O75815 825 aa23.25■■□□□ 1.31
SRM-206ENST00000490101 C16orf71Q8IYS4 520 aaPredicted RBP23.25■■□□□ 1.31
SRM-206ENST00000490101 USP16Q9Y5T5 823 aa23.25■■□□□ 1.31
SRM-206ENST00000490101 SBF1O95248 1867 aa23.25■■□□□ 1.31
SRM-206ENST00000490101 NPHP1O15259 732 aa23.24■■□□□ 1.31
SRM-206ENST00000490101 CAMTA2O94983 1202 aa23.24■■□□□ 1.31
SRM-206ENST00000490101 HOXB7P09629 217 aa23.24■■□□□ 1.31
SRM-206ENST00000490101 PRR5LQ6MZQ0 368 aa23.24■■□□□ 1.31
SRM-206ENST00000490101 DZIP3Q86Y13 1208 aaKnown RBP23.24■■□□□ 1.31
SRM-206ENST00000490101 SSH1Q8WYL5 1049 aa23.24■■□□□ 1.31
SRM-206ENST00000490101 KDM2BQ8NHM5 1336 aa23.24■■□□□ 1.31
SRM-206ENST00000490101 ANKRD31Q8N7Z5 1873 aa23.24■■□□□ 1.31
SRM-206ENST00000490101 BRPF1P55201 1214 aaPredicted RBP23.23■■□□□ 1.31
SRM-206ENST00000490101 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.23■■□□□ 1.31
SRM-206ENST00000490101 ZNF622Q969S3 477 aaKnown RBP eCLIP23.23■■□□□ 1.31
SRM-206ENST00000490101 SETDB2Q96T68 719 aa23.22■■□□□ 1.31
SRM-206ENST00000490101 SMC4Q9NTJ3 1288 aa23.22■■□□□ 1.31
SRM-206ENST00000490101 ZNF219Q9P2Y4 722 aaPredicted RBP23.22■■□□□ 1.31
SRM-206ENST00000490101 NEFLP07196 543 aa23.21■■□□□ 1.31
SRM-206ENST00000490101 SNRPA1P09661 255 aaKnown RBP23.21■■□□□ 1.31
SRM-206ENST00000490101 PDE6BP35913 854 aa23.21■■□□□ 1.31
SRM-206ENST00000490101 CNBD1Q8NA66 436 aa23.21■■□□□ 1.31
SRM-206ENST00000490101 BRIP1Q9BX63 1249 aa23.21■■□□□ 1.31
SRM-206ENST00000490101 CHMP4AQ9BY43 222 aa23.21■■□□□ 1.31
SRM-206ENST00000490101 RRAGCQ9HB90 399 aa23.21■■□□□ 1.31
SRM-206ENST00000490101 BCORQ6W2J9 1755 aa23.21■■□□□ 1.31
SRM-206ENST00000490101 COL11A2P13942 1736 aaPredicted RBP23.2■■□□□ 1.3
SRM-206ENST00000490101 LMNB1P20700 586 aa23.2■■□□□ 1.3
SRM-206ENST00000490101 APLP1P51693 650 aa23.19■■□□□ 1.3
SRM-206ENST00000490101 PRELPP51888 382 aa23.19■■□□□ 1.3
SRM-206ENST00000490101 BCL2L13Q9BXK5 485 aa23.19■■□□□ 1.3
SRM-206ENST00000490101 ST5P78524 1137 aa23.18■■□□□ 1.3
SRM-206ENST00000490101 MRPL50Q8N5N7 158 aaKnown RBP23.18■■□□□ 1.3
SRM-206ENST00000490101 RBM46Q8TBY0 533 aaKnown RBP23.18■■□□□ 1.3
SRM-206ENST00000490101 TNRC6CQ9HCJ0 1690 aaKnown RBP23.17■■□□□ 1.3
SRM-206ENST00000490101 NFKBIEO00221 500 aa23.17■■□□□ 1.3
SRM-206ENST00000490101 C21orf2O43822 256 aa23.17■■□□□ 1.3
SRM-206ENST00000490101 PDZRN3Q9UPQ7 1066 aa23.17■■□□□ 1.3
SRM-206ENST00000490101 TIAM2Q8IVF5 1701 aa23.16■■□□□ 1.3
SRM-206ENST00000490101 KIF16BQ96L93 1317 aa23.16■■□□□ 1.3
SRM-206ENST00000490101 PLIN1O60240 522 aa23.16■■□□□ 1.3
SRM-206ENST00000490101 CCDC30Q5VVM6 783 aa23.16■■□□□ 1.3
SRM-206ENST00000490101 NBPF26B4DH59 902 aa23.15■■□□□ 1.3
SRM-206ENST00000490101 NBPF10Q6P3W6 841 aaKnown RBP23.15■■□□□ 1.3
SRM-206ENST00000490101 NBPF15Q8N660 670 aa23.15■■□□□ 1.3
SRM-206ENST00000490101 CCDC88AQ3V6T2 1871 aa23.15■■□□□ 1.3
SRM-206ENST00000490101 ZC3H4Q9UPT8 1303 aaKnown RBP23.14■■□□□ 1.3
SRM-206ENST00000490101 HDGFL1Q5TGJ6 251 aa23.14■■□□□ 1.29
SRM-206ENST00000490101 NBPF5PQ86XG9 351 aaPredicted RBP23.14■■□□□ 1.29
SRM-206ENST00000490101 ZNF652Q9Y2D9 606 aa23.14■■□□□ 1.29
SRM-206ENST00000490101 GTF3C3Q9Y5Q9 886 aa23.14■■□□□ 1.29
SRM-206ENST00000490101 CACNA1SQ13698 1873 aa23.13■■□□□ 1.29
SRM-206ENST00000490101 IPO8O15397 1037 aaKnown RBP23.13■■□□□ 1.29
SRM-206ENST00000490101 FAM177BA6PVY3 158 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms