RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 MYL6BP14649 208 aa14.29□□□□□ -0.12
CPSF7-212ENST00000489728 NFIXQ14938 502 aa14.29□□□□□ -0.12
CPSF7-212ENST00000489728 TWISTNBQ3B726 338 aaPredicted RBP14.29□□□□□ -0.12
CPSF7-212ENST00000489728 CHPF2Q9P2E5 772 aa14.29□□□□□ -0.12
CPSF7-212ENST00000489728 CACNA1FO60840 1977 aa14.28□□□□□ -0.12
CPSF7-212ENST00000489728 DDR1Q08345 913 aa14.28□□□□□ -0.12
CPSF7-212ENST00000489728 SYT17Q9BSW7 474 aa14.28□□□□□ -0.12
CPSF7-212ENST00000489728 IBTKQ9P2D0 1353 aaPredicted RBP14.27□□□□□ -0.12
CPSF7-212ENST00000489728 PROSER3Q2NL68 480 aa14.27□□□□□ -0.13
CPSF7-212ENST00000489728 TSPYL6Q8N831 410 aa14.27□□□□□ -0.13
CPSF7-212ENST00000489728 SETDB2Q96T68 719 aa14.27□□□□□ -0.13
CPSF7-212ENST00000489728 SPINK5Q9NQ38 1064 aaPredicted RBP14.27□□□□□ -0.13
CPSF7-212ENST00000489728 NUP98P52948 1817 aa14.27□□□□□ -0.13
CPSF7-212ENST00000489728 AFDNP55196 1824 aaKnown RBP14.27□□□□□ -0.13
CPSF7-212ENST00000489728 ELL2O00472 640 aaPredicted RBP14.26□□□□□ -0.13
CPSF7-212ENST00000489728 EXOSC9Q06265 439 aaKnown RBP14.26□□□□□ -0.13
CPSF7-212ENST00000489728 SLFN5Q08AF3 891 aa14.26□□□□□ -0.13
CPSF7-212ENST00000489728 HSP90AB3PQ58FF7 597 aa14.26□□□□□ -0.13
CPSF7-212ENST00000489728 TBC1D9BQ66K14 1250 aa14.26□□□□□ -0.13
CPSF7-212ENST00000489728 GIGYF2Q6Y7W6 1299 aaKnown RBP14.26□□□□□ -0.13
CPSF7-212ENST00000489728 TTLL7Q6ZT98 887 aa14.26□□□□□ -0.13
CPSF7-212ENST00000489728 NECTIN2Q92692 538 aa14.26□□□□□ -0.13
CPSF7-212ENST00000489728 ZNF428Q96B54 188 aa14.26□□□□□ -0.13
CPSF7-212ENST00000489728 STK31Q9BXU1 1019 aa14.26□□□□□ -0.13
CPSF7-212ENST00000489728 ANKRD36CQ5JPF3 1778 aa14.26□□□□□ -0.13
CPSF7-212ENST00000489728 SERPINB2P05120 415 aa14.25□□□□□ -0.13
CPSF7-212ENST00000489728 TGFB2P61812 414 aa14.25□□□□□ -0.13
CPSF7-212ENST00000489728 COPS6Q7L5N1 327 aa14.25□□□□□ -0.13
CPSF7-212ENST00000489728 TRMT2AQ8IZ69 625 aaKnown RBP14.25□□□□□ -0.13
CPSF7-212ENST00000489728 PLBD2Q8NHP8 589 aa14.25□□□□□ -0.13
CPSF7-212ENST00000489728 XAGE3Q8WTP9 111 aa14.25□□□□□ -0.13
CPSF7-212ENST00000489728 KIAA1551Q9HCM1 1747 aa14.24□□□□□ -0.13
CPSF7-212ENST00000489728 RNF123Q5XPI4 1314 aa14.24□□□□□ -0.13
CPSF7-212ENST00000489728 VAMP4O75379 141 aa14.24□□□□□ -0.13
CPSF7-212ENST00000489728 CT47B1P0C2W7 299 aaPredicted RBP14.24□□□□□ -0.13
CPSF7-212ENST00000489728 PARP10Q53GL7 1025 aa14.24□□□□□ -0.13
CPSF7-212ENST00000489728 PDZRN3Q9UPQ7 1066 aa14.24□□□□□ -0.13
CPSF7-212ENST00000489728 DDX58O95786 925 aaKnown RBP14.23□□□□□ -0.13
CPSF7-212ENST00000489728 ANXA1P04083 346 aa14.23□□□□□ -0.13
CPSF7-212ENST00000489728 HNRNPUQ00839 825 aaKnown RBP eCLIP14.23□□□□□ -0.13
CPSF7-212ENST00000489728 HLFQ16534 295 aa14.23□□□□□ -0.13
CPSF7-212ENST00000489728 NYXQ9GZU5 481 aa14.23□□□□□ -0.13
CPSF7-212ENST00000489728 ZBTB3Q9H5J0 574 aa14.23□□□□□ -0.13
CPSF7-212ENST00000489728 NIP7Q9Y221 180 aaKnown RBP eCLIP14.23□□□□□ -0.13
CPSF7-212ENST00000489728 ARFGEF2Q9Y6D5 1785 aa14.23□□□□□ -0.13
CPSF7-212ENST00000489728 PXDNLA1KZ92 1463 aa14.23□□□□□ -0.13
CPSF7-212ENST00000489728 RIC1Q4ADV7 1423 aa14.23□□□□□ -0.13
CPSF7-212ENST00000489728 ZBED9Q6R2W3 1325 aa14.22□□□□□ -0.13
CPSF7-212ENST00000489728 BICDL1Q6ZP65 573 aa14.22□□□□□ -0.13
CPSF7-212ENST00000489728 ANKRD13DQ6ZTN6 518 aa14.22□□□□□ -0.13
CPSF7-212ENST00000489728 ZNF34Q8IZ26 560 aa14.22□□□□□ -0.13
CPSF7-212ENST00000489728 KLHL34Q8N239 644 aa14.22□□□□□ -0.13
CPSF7-212ENST00000489728 CNBD1Q8NA66 436 aa14.22□□□□□ -0.13
CPSF7-212ENST00000489728 DLEC1Q9Y238 1755 aa14.22□□□□□ -0.13
CPSF7-212ENST00000489728 DCAF8L1A6NGE4 600 aa14.21□□□□□ -0.13
CPSF7-212ENST00000489728 ST5P78524 1137 aa14.21□□□□□ -0.13
CPSF7-212ENST00000489728 AIMP1Q12904 312 aaKnown RBP14.21□□□□□ -0.13
CPSF7-212ENST00000489728 PRR5LQ6MZQ0 368 aa14.21□□□□□ -0.13
CPSF7-212ENST00000489728 TPTE2Q6XPS3 522 aa14.21□□□□□ -0.13
CPSF7-212ENST00000489728 NBPF5PQ86XG9 351 aaPredicted RBP14.21□□□□□ -0.13
CPSF7-212ENST00000489728 BRIP1Q9BX63 1249 aa14.21□□□□□ -0.13
CPSF7-212ENST00000489728 TCIRG1Q13488 830 aa14.2□□□□□ -0.14
CPSF7-212ENST00000489728 NLGN2Q8NFZ4 835 aa14.2□□□□□ -0.14
CPSF7-212ENST00000489728 BRCA1P38398 1863 aaKnown RBP14.2□□□□□ -0.14
CPSF7-212ENST00000489728 UBN2Q6ZU65 1347 aa14.19□□□□□ -0.14
CPSF7-212ENST00000489728 ANKRD31Q8N7Z5 1873 aa14.19□□□□□ -0.14
CPSF7-212ENST00000489728 NPHP1O15259 732 aa14.19□□□□□ -0.14
CPSF7-212ENST00000489728 SLC4A2P04920 1241 aa14.19□□□□□ -0.14
CPSF7-212ENST00000489728 PDE6BP35913 854 aa14.19□□□□□ -0.14
CPSF7-212ENST00000489728 TRIM28Q13263 835 aaKnown RBP14.19□□□□□ -0.14
CPSF7-212ENST00000489728 PPP1R42Q7Z4L9 355 aa14.19□□□□□ -0.14
CPSF7-212ENST00000489728 CDCA7LQ96GN5 454 aa14.19□□□□□ -0.14
CPSF7-212ENST00000489728 PHAXQ9H814 394 aaKnown RBP14.19□□□□□ -0.14
CPSF7-212ENST00000489728 FLIIQ13045 1269 aa14.18□□□□□ -0.14
CPSF7-212ENST00000489728 KSR2Q6VAB6 950 aa14.18□□□□□ -0.14
CPSF7-212ENST00000489728 RIC3Q7Z5B4 369 aa14.18□□□□□ -0.14
CPSF7-212ENST00000489728 N4BP2Q86UW6 1770 aaPredicted RBP14.18□□□□□ -0.14
CPSF7-212ENST00000489728 NTSR2O95665 410 aa14.17□□□□□ -0.14
CPSF7-212ENST00000489728 ALDH1L2Q3SY69 923 aa14.17□□□□□ -0.14
CPSF7-212ENST00000489728 NLRP10Q86W26 655 aa14.17□□□□□ -0.14
CPSF7-212ENST00000489728 ISCA1Q9BUE6 129 aa14.17□□□□□ -0.14
CPSF7-212ENST00000489728 KLRG2A4D1S0 409 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-212ENST00000489728 GPTP24298 496 aa14.16□□□□□ -0.14
CPSF7-212ENST00000489728 METTL22Q9BUU2 404 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-212ENST00000489728 UTP14AQ9BVJ6 771 aaKnown RBP14.16□□□□□ -0.14
CPSF7-212ENST00000489728 ADCY9O60503 1353 aa14.16□□□□□ -0.14
CPSF7-212ENST00000489728 COL11A2P13942 1736 aaPredicted RBP14.15□□□□□ -0.14
CPSF7-212ENST00000489728 PI4KAP2A4QPH2 592 aa14.15□□□□□ -0.14
CPSF7-212ENST00000489728 H0YIN7 160 aa14.15□□□□□ -0.14
CPSF7-212ENST00000489728 GRIN3BO60391 1043 aa14.15□□□□□ -0.14
CPSF7-212ENST00000489728 DPEP1P16444 411 aa14.15□□□□□ -0.14
CPSF7-212ENST00000489728 KCNA3P22001 575 aa14.15□□□□□ -0.14
CPSF7-212ENST00000489728 GTF2E1P29083 439 aaPredicted RBP14.15□□□□□ -0.14
CPSF7-212ENST00000489728 NEXNQ0ZGT2 675 aa14.15□□□□□ -0.14
CPSF7-212ENST00000489728 SUSD4Q5VX71 490 aa14.15□□□□□ -0.14
CPSF7-212ENST00000489728 PI4KAP1Q8N8J0 262 aa14.15□□□□□ -0.14
CPSF7-212ENST00000489728 CCDC191Q8NCU4 936 aa14.15□□□□□ -0.14
CPSF7-212ENST00000489728 PIM2Q9P1W9 311 aa14.15□□□□□ -0.14
CPSF7-212ENST00000489728 ARFGEF1Q9Y6D6 1849 aa14.15□□□□□ -0.14
CPSF7-212ENST00000489728 PTPRCP08575 1304 aa14.15□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms