RNA–Protein interactions for RNA: ENST00000487431.1

RPL35-203, Transcript of ribosomal protein L35, humanhuman

TSL 1 (best)

Gene RPL35, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-203ENST00000487431 PLEKHF1Q96S99 279 aa28.46■■■□□ 2.15
RPL35-203ENST00000487431 RRAGCQ9HB90 399 aa28.46■■■□□ 2.15
RPL35-203ENST00000487431 NBPF26B4DH59 902 aa28.45■■■□□ 2.14
RPL35-203ENST00000487431 NBPF10Q6P3W6 841 aaKnown RBP28.45■■■□□ 2.14
RPL35-203ENST00000487431 CCDC24Q8N4L8 307 aa28.45■■■□□ 2.14
RPL35-203ENST00000487431 NBPF15Q8N660 670 aa28.45■■■□□ 2.14
RPL35-203ENST00000487431 ZNF622Q969S3 477 aaKnown RBP eCLIP28.45■■■□□ 2.143e-46■□□□□ 9.8
RPL35-203ENST00000487431 ST5P78524 1137 aa28.44■■■□□ 2.14
RPL35-203ENST00000487431 NUP98P52948 1817 aa28.43■■■□□ 2.14
RPL35-203ENST00000487431 GLTPD2A6NH11 291 aa28.43■■■□□ 2.14
RPL35-203ENST00000487431 SRGNP10124 158 aa28.43■■■□□ 2.14
RPL35-203ENST00000487431 STYK1Q6J9G0 422 aa28.43■■■□□ 2.14
RPL35-203ENST00000487431 DNAJC5GQ8N7S2 189 aa28.43■■■□□ 2.14
RPL35-203ENST00000487431 ZNF652Q9Y2D9 606 aa28.43■■■□□ 2.14
RPL35-203ENST00000487431 LTBP3Q9NS15 1303 aa28.42■■■□□ 2.14
RPL35-203ENST00000487431 C21orf2O43822 256 aa28.41■■■□□ 2.14
RPL35-203ENST00000487431 CNKSR1Q969H4 720 aa28.41■■■□□ 2.14
RPL35-203ENST00000487431 NEFMP07197 916 aa28.4■■■□□ 2.14
RPL35-203ENST00000487431 PNISRQ8TF01 805 aaKnown RBP28.4■■■□□ 2.14
RPL35-203ENST00000487431 MASTLQ96GX5 879 aa28.39■■■□□ 2.14
RPL35-203ENST00000487431 MIS18AQ9NYP9 233 aa28.39■■■□□ 2.14
RPL35-203ENST00000487431 KLRG2A4D1S0 409 aaPredicted RBP28.38■■■□□ 2.13
RPL35-203ENST00000487431 NPHP1O15259 732 aa28.38■■■□□ 2.13
RPL35-203ENST00000487431 NFE2L2Q16236 605 aa28.38■■■□□ 2.13
RPL35-203ENST00000487431 NBPF5PQ86XG9 351 aaPredicted RBP28.38■■■□□ 2.13
RPL35-203ENST00000487431 PRPF40BQ6NWY9 871 aaKnown RBP28.37■■■□□ 2.13
RPL35-203ENST00000487431 VEGFAP15692 232 aaPredicted RBP28.36■■■□□ 2.13
RPL35-203ENST00000487431 SOGA3Q5TF21 947 aa28.35■■■□□ 2.13
RPL35-203ENST00000487431 SMC1BQ8NDV3 1235 aa28.35■■■□□ 2.13
RPL35-203ENST00000487431 PNNQ9H307 717 aaKnown RBP28.35■■■□□ 2.13
RPL35-203ENST00000487431 NIP7Q9Y221 180 aaKnown RBP eCLIP28.35■■■□□ 2.13
RPL35-203ENST00000487431 EIF4A1P60842 406 aaKnown RBP28.34■■■□□ 2.13
RPL35-203ENST00000487431 TPTE2Q6XPS3 522 aa28.34■■■□□ 2.13
RPL35-203ENST00000487431 TAOK3Q9H2K8 898 aa28.34■■■□□ 2.13
RPL35-203ENST00000487431 ZNF219Q9P2Y4 722 aaPredicted RBP28.34■■■□□ 2.13
RPL35-203ENST00000487431 C7orf43Q8WVR3 580 aa28.33■■■□□ 2.13
RPL35-203ENST00000487431 POTECB2RU33 542 aa28.32■■■□□ 2.12
RPL35-203ENST00000487431 NPR1P16066 1061 aa28.32■■■□□ 2.12
RPL35-203ENST00000487431 HLFQ16534 295 aa28.32■■■□□ 2.12
RPL35-203ENST00000487431 ERFEQ4G0M1 354 aa28.32■■■□□ 2.12
RPL35-203ENST00000487431 IFFO2Q5TF58 517 aa28.31■■■□□ 2.12
RPL35-203ENST00000487431 MAPK8IP3Q9UPT6 1336 aa28.3■■■□□ 2.12
RPL35-203ENST00000487431 ERVV-1B6SEH8 477 aa28.3■■■□□ 2.12
RPL35-203ENST00000487431 DPY19L2Q6NUT2 758 aa28.3■■■□□ 2.12
RPL35-203ENST00000487431 THUMPD2Q9BTF0 503 aaKnown RBP28.3■■■□□ 2.12
RPL35-203ENST00000487431 RALBP1Q15311 655 aa28.28■■■□□ 2.12
RPL35-203ENST00000487431 SCN4AP35499 1836 aa28.27■■■□□ 2.12
RPL35-203ENST00000487431 MAP3K15Q6ZN16 1313 aa28.27■■■□□ 2.12
RPL35-203ENST00000487431 KLRG1Q96E93 195 aa28.27■■■□□ 2.12
RPL35-203ENST00000487431 HTRA3P83110 453 aa28.26■■■□□ 2.11
RPL35-203ENST00000487431 RIC1Q4ADV7 1423 aa28.26■■■□□ 2.11
RPL35-203ENST00000487431 ERBB4Q15303 1308 aa28.25■■■□□ 2.11
RPL35-203ENST00000487431 CCDC93Q567U6 631 aa28.25■■■□□ 2.11
RPL35-203ENST00000487431 JMYQ8N9B5 988 aa28.25■■■□□ 2.11
RPL35-203ENST00000487431 IBTKQ9P2D0 1353 aaPredicted RBP28.24■■■□□ 2.11
RPL35-203ENST00000487431 NYXQ9GZU5 481 aa28.24■■■□□ 2.11
RPL35-203ENST00000487431 CRY2Q49AN0 593 aa28.23■■■□□ 2.11
RPL35-203ENST00000487431 TTLL7Q6ZT98 887 aa28.23■■■□□ 2.11
RPL35-203ENST00000487431 RRP7AQ9Y3A4 280 aaKnown RBP28.23■■■□□ 2.11
RPL35-203ENST00000487431 ABCC12Q96J65 1359 aa28.23■■■□□ 2.11
RPL35-203ENST00000487431 FAM177BA6PVY3 158 aa28.22■■■□□ 2.11
RPL35-203ENST00000487431 KIF6Q6ZMV9 814 aa28.22■■■□□ 2.11
RPL35-203ENST00000487431 SNED1Q8TER0 1413 aa28.22■■■□□ 2.11
RPL35-203ENST00000487431 BABAM1Q9NWV8 329 aa28.22■■■□□ 2.11
RPL35-203ENST00000487431 ALDH1B1P30837 517 aa28.21■■■□□ 2.11
RPL35-203ENST00000487431 FKBP4Q02790 459 aaKnown RBP eCLIP28.21■■■□□ 2.11
RPL35-203ENST00000487431 NGEFQ8N5V2 710 aa28.21■■■□□ 2.11
RPL35-203ENST00000487431 ANKRD36CQ5JPF3 1778 aa28.21■■■□□ 2.11
RPL35-203ENST00000487431 DDNO94850 711 aaPredicted RBP28.19■■■□□ 2.1
RPL35-203ENST00000487431 MYL6BP14649 208 aa28.19■■■□□ 2.1
RPL35-203ENST00000487431 GTF2E1P29083 439 aaPredicted RBP28.19■■■□□ 2.1
RPL35-203ENST00000487431 RIPK4P57078 832 aa28.19■■■□□ 2.1
RPL35-203ENST00000487431 LRP10Q7Z4F1 713 aa28.19■■■□□ 2.1
RPL35-203ENST00000487431 RTKN2Q8IZC4 609 aa28.19■■■□□ 2.1
RPL35-203ENST00000487431 TSPYL4Q9UJ04 414 aa28.19■■■□□ 2.1
RPL35-203ENST00000487431 UBN2Q6ZU65 1347 aa28.18■■■□□ 2.1
RPL35-203ENST00000487431 PCNTO95613 3336 aa28.18■■■□□ 2.1
RPL35-203ENST00000487431 ZNF34Q8IZ26 560 aa28.18■■■□□ 2.1
RPL35-203ENST00000487431 TMPOP42166 694 aaKnown RBP28.17■■■□□ 2.1
RPL35-203ENST00000487431 GIGYF2Q6Y7W6 1299 aaKnown RBP28.17■■■□□ 2.1
RPL35-203ENST00000487431 NUTM1Q86Y26 1132 aa28.17■■■□□ 2.1
RPL35-203ENST00000487431 L3MBTL3Q96JM7 780 aaPredicted RBP28.17■■■□□ 2.1
RPL35-203ENST00000487431 MYBBP1AQ9BQG0 1328 aaKnown RBP28.17■■■□□ 2.1
RPL35-203ENST00000487431 PDIA6Q15084 440 aa28.16■■■□□ 2.1
RPL35-203ENST00000487431 OLFM4Q6UX06 510 aa28.16■■■□□ 2.1
RPL35-203ENST00000487431 ZBTB3Q9H5J0 574 aa28.16■■■□□ 2.1
RPL35-203ENST00000487431 HOXA10P31260 410 aaPredicted RBP28.15■■■□□ 2.1
RPL35-203ENST00000487431 LMOD3Q0VAK6 560 aa28.15■■■□□ 2.1
RPL35-203ENST00000487431 SUSD4Q5VX71 490 aa28.14■■■□□ 2.1
RPL35-203ENST00000487431 ZNF277Q9NRM2 450 aaPredicted RBP28.14■■■□□ 2.1
RPL35-203ENST00000487431 LAMB2P55268 1798 aa28.14■■■□□ 2.09
RPL35-203ENST00000487431 NTSR2O95665 410 aa28.13■■■□□ 2.09
RPL35-203ENST00000487431 GPTP24298 496 aa28.13■■■□□ 2.09
RPL35-203ENST00000487431 ADAMTSL1Q8N6G6 1762 aa28.13■■■□□ 2.09
RPL35-203ENST00000487431 IQCA1LA6NCM1 817 aa28.12■■■□□ 2.09
RPL35-203ENST00000487431 CHADLQ6NUI6 762 aa28.12■■■□□ 2.09
RPL35-203ENST00000487431 PSMD1Q99460 953 aa28.12■■■□□ 2.09
RPL35-203ENST00000487431 DDX10Q13206 875 aaKnown RBP28.11■■■□□ 2.09
RPL35-203ENST00000487431 CC2D2BQ6DHV5 1058 aa28.11■■■□□ 2.09
RPL35-203ENST00000487431 IARSP41252 1262 aaKnown RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms