RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 PTPN23Q9H3S7 1636 aa7.99□□□□□ -1.13
R3HDM1-218ENST00000487294 ROBO1Q9Y6N7 1651 aa7.98□□□□□ -1.13
R3HDM1-218ENST00000487294 ADGRB3O60242 1522 aa7.98□□□□□ -1.13
R3HDM1-218ENST00000487294 PPFIA3O75145 1194 aa7.98□□□□□ -1.13
R3HDM1-218ENST00000487294 NR1H3Q13133 447 aa7.98□□□□□ -1.13
R3HDM1-218ENST00000487294 INTS6LQ5JSJ4 861 aaKnown RBP7.98□□□□□ -1.13
R3HDM1-218ENST00000487294 ADGRL2O95490 1459 aa7.98□□□□□ -1.13
R3HDM1-218ENST00000487294 ANKRD30AQ9BXX3 1397 aa7.97□□□□□ -1.13
R3HDM1-218ENST00000487294 ZFYVE9O95405 1425 aa7.97□□□□□ -1.13
R3HDM1-218ENST00000487294 FGD6Q6ZV73 1430 aa7.97□□□□□ -1.13
R3HDM1-218ENST00000487294 IRF5Q13568 498 aa7.97□□□□□ -1.13
R3HDM1-218ENST00000487294 PPP1R26Q5T8A7 1209 aaPredicted RBP7.97□□□□□ -1.13
R3HDM1-218ENST00000487294 POTEAQ6S8J7 498 aa7.97□□□□□ -1.13
R3HDM1-218ENST00000487294 RRP7BPQ9NSQ0 103 aa7.97□□□□□ -1.13
R3HDM1-218ENST00000487294 SOS2Q07890 1332 aaPredicted RBP7.97□□□□□ -1.13
R3HDM1-218ENST00000487294 NBPF20Q3BBV1 942 aa7.96□□□□□ -1.14
R3HDM1-218ENST00000487294 PROSER2Q86WR7 435 aaPredicted RBP7.96□□□□□ -1.14
R3HDM1-218ENST00000487294 TSEN34Q9BSV6 310 aaKnown RBP7.96□□□□□ -1.14
R3HDM1-218ENST00000487294 GDPD2Q9HCC8 539 aa7.96□□□□□ -1.14
R3HDM1-218ENST00000487294 PCDHB9Q9Y5E1 797 aa7.96□□□□□ -1.14
R3HDM1-218ENST00000487294 EMILIN1Q9Y6C2 1016 aa7.96□□□□□ -1.14
R3HDM1-218ENST00000487294 MSH6P52701 1360 aa7.96□□□□□ -1.14
R3HDM1-218ENST00000487294 JCADQ9P266 1359 aa7.96□□□□□ -1.14
R3HDM1-218ENST00000487294 PLEKHG1Q9ULL1 1385 aa7.96□□□□□ -1.14
R3HDM1-218ENST00000487294 CHD2O14647 1828 aaKnown RBP7.95□□□□□ -1.14
R3HDM1-218ENST00000487294 ESPNB1AK53 854 aa7.95□□□□□ -1.14
R3HDM1-218ENST00000487294 SLC26A8Q96RN1 970 aa7.95□□□□□ -1.14
R3HDM1-218ENST00000487294 PRM3Q9NNZ6 103 aa7.95□□□□□ -1.14
R3HDM1-218ENST00000487294 SLAIN2Q9P270 581 aa7.95□□□□□ -1.14
R3HDM1-218ENST00000487294 DNMT3LQ9UJW3 386 aa7.95□□□□□ -1.14
R3HDM1-218ENST00000487294 TBX22Q9Y458 520 aa7.95□□□□□ -1.14
R3HDM1-218ENST00000487294 PIK3R4Q99570 1358 aa7.95□□□□□ -1.14
R3HDM1-218ENST00000487294 GIGYF1O75420 1035 aaPredicted RBP7.94□□□□□ -1.14
R3HDM1-218ENST00000487294 RAB15P59190 212 aa7.94□□□□□ -1.14
R3HDM1-218ENST00000487294 DHX9Q08211 1270 aaKnown RBP7.94□□□□□ -1.14
R3HDM1-218ENST00000487294 TMPRSS4Q9NRS4 437 aa7.94□□□□□ -1.14
R3HDM1-218ENST00000487294 TMEM131LA2VDJ0 1609 aa7.93□□□□□ -1.14
R3HDM1-218ENST00000487294 COL16A1Q07092 1604 aaPredicted RBP7.93□□□□□ -1.14
R3HDM1-218ENST00000487294 ABL2P42684 1182 aa7.93□□□□□ -1.14
R3HDM1-218ENST00000487294 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.93□□□□□ -1.14
R3HDM1-218ENST00000487294 SPATA31A6Q5VVP1 1343 aa7.93□□□□□ -1.14
R3HDM1-218ENST00000487294 LOC105371045A0A1W2PR82 267 aa7.92□□□□□ -1.14
R3HDM1-218ENST00000487294 ERVH48-1M5A8F1 160 aa7.92□□□□□ -1.14
R3HDM1-218ENST00000487294 MCCD1P59942 119 aaPredicted RBP7.92□□□□□ -1.14
R3HDM1-218ENST00000487294 KCNMA1Q12791 1236 aa7.92□□□□□ -1.14
R3HDM1-218ENST00000487294 CBLBQ13191 982 aa7.92□□□□□ -1.14
R3HDM1-218ENST00000487294 PGPEP1Q9NXJ5 209 aa7.92□□□□□ -1.14
R3HDM1-218ENST00000487294 COG6Q9Y2V7 657 aa7.92□□□□□ -1.14
R3HDM1-218ENST00000487294 ZNF330Q9Y3S2 320 aaPredicted RBP7.92□□□□□ -1.14
R3HDM1-218ENST00000487294 ADAMTS13Q76LX8 1427 aa7.92□□□□□ -1.14
R3HDM1-218ENST00000487294 ANKRD50Q9ULJ7 1429 aa7.92□□□□□ -1.14
R3HDM1-218ENST00000487294 DIP2AQ14689 1571 aa7.92□□□□□ -1.14
R3HDM1-218ENST00000487294 AHDC1Q5TGY3 1603 aaPredicted RBP7.92□□□□□ -1.14
R3HDM1-218ENST00000487294 PHLPP1O60346 1717 aa7.92□□□□□ -1.14
R3HDM1-218ENST00000487294 TTLL8A6PVC2 850 aa7.91□□□□□ -1.14
R3HDM1-218ENST00000487294 VAC14Q08AM6 782 aa7.91□□□□□ -1.14
R3HDM1-218ENST00000487294 FLIIQ13045 1269 aa7.91□□□□□ -1.14
R3HDM1-218ENST00000487294 Q6ZVU0 165 aa7.91□□□□□ -1.14
R3HDM1-218ENST00000487294 SEPT12Q8IYM1 358 aa7.91□□□□□ -1.14
R3HDM1-218ENST00000487294 ZNF784Q8NCA9 323 aaPredicted RBP7.91□□□□□ -1.14
R3HDM1-218ENST00000487294 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.91□□□□□ -1.14
R3HDM1-218ENST00000487294 POM121Q96HA1 1249 aa7.91□□□□□ -1.14
R3HDM1-218ENST00000487294 RIMS2Q9UQ26 1411 aa7.91□□□□□ -1.14
R3HDM1-218ENST00000487294 UNC13BO14795 1591 aa7.9□□□□□ -1.14
R3HDM1-218ENST00000487294 CDK12Q9NYV4 1490 aaPredicted RBP7.9□□□□□ -1.14
R3HDM1-218ENST00000487294 DCCP43146 1447 aa7.9□□□□□ -1.14
R3HDM1-218ENST00000487294 C19orf44Q9H6X5 657 aa7.9□□□□□ -1.14
R3HDM1-218ENST00000487294 SHPRHQ149N8 1683 aa7.89□□□□□ -1.15
R3HDM1-218ENST00000487294 GCC2Q8IWJ2 1684 aa7.89□□□□□ -1.15
R3HDM1-218ENST00000487294 LRP6O75581 1613 aa7.89□□□□□ -1.15
R3HDM1-218ENST00000487294 LILRA1O75019 489 aa7.89□□□□□ -1.15
R3HDM1-218ENST00000487294 ADD1P35611 737 aaKnown RBP7.89□□□□□ -1.15
R3HDM1-218ENST00000487294 ZNF772Q68DY9 489 aaPredicted RBP7.89□□□□□ -1.15
R3HDM1-218ENST00000487294 CEP126Q9P2H0 1117 aa7.89□□□□□ -1.15
R3HDM1-218ENST00000487294 CHIC2Q9UKJ5 165 aa7.89□□□□□ -1.15
R3HDM1-218ENST00000487294 MYO5BQ9ULV0 1848 aa7.89□□□□□ -1.15
R3HDM1-218ENST00000487294 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.89□□□□□ -1.15
R3HDM1-218ENST00000487294 ROCK1Q13464 1354 aa7.88□□□□□ -1.15
R3HDM1-218ENST00000487294 LOC100996750A0A140TA64 210 aa7.88□□□□□ -1.15
R3HDM1-218ENST00000487294 RNF225M0QZC1 329 aaPredicted RBP7.88□□□□□ -1.15
R3HDM1-218ENST00000487294 SPINT1O43278 529 aa7.88□□□□□ -1.15
R3HDM1-218ENST00000487294 PTSQ03393 145 aa7.88□□□□□ -1.15
R3HDM1-218ENST00000487294 NANOS1Q8WY41 292 aaKnown RBP7.88□□□□□ -1.15
R3HDM1-218ENST00000487294 ZNF592Q92610 1267 aa7.88□□□□□ -1.15
R3HDM1-218ENST00000487294 KRTAP4-6Q9BYQ5 205 aa7.88□□□□□ -1.15
R3HDM1-218ENST00000487294 SETD5Q9C0A6 1442 aa7.87□□□□□ -1.15
R3HDM1-218ENST00000487294 EIF4G2P78344 907 aaKnown RBP eCLIP7.87□□□□□ -1.15
R3HDM1-218ENST00000487294 KRT76Q01546 638 aa7.87□□□□□ -1.15
R3HDM1-218ENST00000487294 WASHC4Q2M389 1173 aa7.87□□□□□ -1.15
R3HDM1-218ENST00000487294 RNF20Q5VTR2 975 aa7.87□□□□□ -1.15
R3HDM1-218ENST00000487294 TRPM2O94759 1503 aa7.87□□□□□ -1.15
R3HDM1-218ENST00000487294 SETD1AO15047 1707 aaKnown RBP7.86□□□□□ -1.15
R3HDM1-218ENST00000487294 E9PCH4 1651 aa7.86□□□□□ -1.15
R3HDM1-218ENST00000487294 IQGAP3Q86VI3 1631 aa7.86□□□□□ -1.15
R3HDM1-218ENST00000487294 SETBP1Q9Y6X0 1596 aa7.86□□□□□ -1.15
R3HDM1-218ENST00000487294 PPP1R15AO75807 674 aaPredicted RBP7.86□□□□□ -1.15
R3HDM1-218ENST00000487294 ATF3P18847 181 aa7.86□□□□□ -1.15
R3HDM1-218ENST00000487294 GSK3AP49840 483 aa7.86□□□□□ -1.15
R3HDM1-218ENST00000487294 BRINP3Q76B58 766 aa7.86□□□□□ -1.15
R3HDM1-218ENST00000487294 AGBL1Q96MI9 1066 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms