RNA–Protein interactions for RNA: ENST00000485532.1

PRAME-212, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 3

Gene PRAME, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-212ENST00000485532 APLP1P51693 650 aa16.78■□□□□ 0.28
PRAME-212ENST00000485532 TAF7Q15545 349 aaPredicted RBP16.78■□□□□ 0.28
PRAME-212ENST00000485532 RBM46Q8TBY0 533 aaKnown RBP16.78■□□□□ 0.28
PRAME-212ENST00000485532 THUMPD2Q9BTF0 503 aaKnown RBP16.78■□□□□ 0.28
PRAME-212ENST00000485532 KDM3BQ7LBC6 1761 aa16.77■□□□□ 0.28
PRAME-212ENST00000485532 WDR90Q96KV7 1748 aa16.77■□□□□ 0.28
PRAME-212ENST00000485532 PLEKHF1Q96S99 279 aa16.77■□□□□ 0.28
PRAME-212ENST00000485532 LAMB4A4D0S4 1761 aa16.77■□□□□ 0.27
PRAME-212ENST00000485532 FAM177BA6PVY3 158 aa16.76■□□□□ 0.27
PRAME-212ENST00000485532 DNAJC5GQ8N7S2 189 aa16.76■□□□□ 0.27
PRAME-212ENST00000485532 DICER1Q9UPY3 1922 aaKnown RBP16.75■□□□□ 0.27
PRAME-212ENST00000485532 GLTPD2A6NH11 291 aa16.75■□□□□ 0.27
PRAME-212ENST00000485532 SRGNP10124 158 aa16.75■□□□□ 0.27
PRAME-212ENST00000485532 ST5P78524 1137 aa16.75■□□□□ 0.27
PRAME-212ENST00000485532 NBPF5PQ86XG9 351 aaPredicted RBP16.75■□□□□ 0.27
PRAME-212ENST00000485532 ARFGEF2Q9Y6D5 1785 aa16.74■□□□□ 0.27
PRAME-212ENST00000485532 HLFQ16534 295 aa16.74■□□□□ 0.27
PRAME-212ENST00000485532 PRPF40BQ6NWY9 871 aaKnown RBP16.74■□□□□ 0.27
PRAME-212ENST00000485532 CLEC4GQ6UXB4 293 aa16.74■□□□□ 0.27
PRAME-212ENST00000485532 NGEFQ8N5V2 710 aa16.74■□□□□ 0.27
PRAME-212ENST00000485532 PDZRN3Q9UPQ7 1066 aa16.74■□□□□ 0.27
PRAME-212ENST00000485532 NIP7Q9Y221 180 aaKnown RBP eCLIP16.74■□□□□ 0.27
PRAME-212ENST00000485532 ZC3H4Q9UPT8 1303 aaKnown RBP16.73■□□□□ 0.27
PRAME-212ENST00000485532 NFE2L2Q16236 605 aa16.73■□□□□ 0.27
PRAME-212ENST00000485532 STYK1Q6J9G0 422 aa16.73■□□□□ 0.27
PRAME-212ENST00000485532 NEFMP07197 916 aa16.72■□□□□ 0.27
PRAME-212ENST00000485532 EIF4A1P60842 406 aaKnown RBP16.72■□□□□ 0.27
PRAME-212ENST00000485532 FSTL1Q12841 308 aa16.72■□□□□ 0.27
PRAME-212ENST00000485532 CNKSR1Q969H4 720 aa16.72■□□□□ 0.27
PRAME-212ENST00000485532 MASTLQ96GX5 879 aa16.72■□□□□ 0.27
PRAME-212ENST00000485532 ZNF652Q9Y2D9 606 aa16.72■□□□□ 0.27
PRAME-212ENST00000485532 NUP98P52948 1817 aa16.71■□□□□ 0.27
PRAME-212ENST00000485532 POTECB2RU33 542 aa16.71■□□□□ 0.27
PRAME-212ENST00000485532 ERFEQ4G0M1 354 aa16.71■□□□□ 0.27
PRAME-212ENST00000485532 OLFM4Q6UX06 510 aa16.71■□□□□ 0.27
PRAME-212ENST00000485532 RRP7AQ9Y3A4 280 aaKnown RBP16.71■□□□□ 0.27
PRAME-212ENST00000485532 VEGFAP15692 232 aaPredicted RBP16.7■□□□□ 0.26
PRAME-212ENST00000485532 MYL6BP14649 208 aa16.69■□□□□ 0.26
PRAME-212ENST00000485532 TTLL7Q6ZT98 887 aa16.69■□□□□ 0.26
PRAME-212ENST00000485532 PNISRQ8TF01 805 aaKnown RBP16.69■□□□□ 0.26
PRAME-212ENST00000485532 C7orf43Q8WVR3 580 aa16.69■□□□□ 0.26
PRAME-212ENST00000485532 TAOK3Q9H2K8 898 aa16.69■□□□□ 0.26
PRAME-212ENST00000485532 MAPK8IP3Q9UPT6 1336 aa16.69■□□□□ 0.26
PRAME-212ENST00000485532 TPTE2Q6XPS3 522 aa16.68■□□□□ 0.26
PRAME-212ENST00000485532 SMC1BQ8NDV3 1235 aa16.68■□□□□ 0.26
PRAME-212ENST00000485532 LTBP3Q9NS15 1303 aa16.68■□□□□ 0.26
PRAME-212ENST00000485532 ABCC12Q96J65 1359 aa16.67■□□□□ 0.26
PRAME-212ENST00000485532 KLRG2A4D1S0 409 aaPredicted RBP16.67■□□□□ 0.26
PRAME-212ENST00000485532 DDNO94850 711 aaPredicted RBP16.67■□□□□ 0.26
PRAME-212ENST00000485532 NPR1P16066 1061 aa16.67■□□□□ 0.26
PRAME-212ENST00000485532 IFFO2Q5TF58 517 aa16.67■□□□□ 0.26
PRAME-212ENST00000485532 NUTM1Q86Y26 1132 aa16.67■□□□□ 0.26
PRAME-212ENST00000485532 GPTP24298 496 aa16.66■□□□□ 0.26
PRAME-212ENST00000485532 DDX10Q13206 875 aaKnown RBP16.66■□□□□ 0.26
PRAME-212ENST00000485532 DPY19L2Q6NUT2 758 aa16.66■□□□□ 0.26
PRAME-212ENST00000485532 ZBTB3Q9H5J0 574 aa16.66■□□□□ 0.26
PRAME-212ENST00000485532 MAP3K15Q6ZN16 1313 aa16.66■□□□□ 0.26
PRAME-212ENST00000485532 RGL2O15211 777 aa16.65■□□□□ 0.26
PRAME-212ENST00000485532 RIPK4P57078 832 aa16.65■□□□□ 0.26
PRAME-212ENST00000485532 CCDC93Q567U6 631 aa16.65■□□□□ 0.26
PRAME-212ENST00000485532 KLRG1Q96E93 195 aa16.65■□□□□ 0.26
PRAME-212ENST00000485532 ZNF277Q9NRM2 450 aaPredicted RBP16.65■□□□□ 0.26
PRAME-212ENST00000485532 UBN2Q6ZU65 1347 aa16.65■□□□□ 0.26
PRAME-212ENST00000485532 PCNTO95613 3336 aa16.65■□□□□ 0.26
PRAME-212ENST00000485532 ERVV-1B6SEH8 477 aa16.64■□□□□ 0.25
PRAME-212ENST00000485532 POTEIP0CG38 1075 aa16.64■□□□□ 0.25
PRAME-212ENST00000485532 POTEJP0CG39 1038 aa16.64■□□□□ 0.25
PRAME-212ENST00000485532 GTF2E1P29083 439 aaPredicted RBP16.64■□□□□ 0.25
PRAME-212ENST00000485532 SOGA3Q5TF21 947 aa16.64■□□□□ 0.25
PRAME-212ENST00000485532 KIF6Q6ZMV9 814 aa16.64■□□□□ 0.25
PRAME-212ENST00000485532 SLC51AQ86UW1 340 aa16.64■□□□□ 0.25
PRAME-212ENST00000485532 PNNQ9H307 717 aaKnown RBP16.64■□□□□ 0.25
PRAME-212ENST00000485532 TSPYL4Q9UJ04 414 aa16.64■□□□□ 0.25
PRAME-212ENST00000485532 ANXA1P04083 346 aa16.63■□□□□ 0.25
PRAME-212ENST00000485532 EIF2S2P20042 333 aaKnown RBP16.63■□□□□ 0.25
PRAME-212ENST00000485532 RALBP1Q15311 655 aa16.63■□□□□ 0.25
PRAME-212ENST00000485532 CCDC146Q8IYE0 955 aa16.63■□□□□ 0.25
PRAME-212ENST00000485532 TMPOP42166 694 aaKnown RBP16.62■□□□□ 0.25
PRAME-212ENST00000485532 FKBP4Q02790 459 aaKnown RBP eCLIP16.62■□□□□ 0.25
PRAME-212ENST00000485532 PROSER3Q2NL68 480 aa16.62■□□□□ 0.25
PRAME-212ENST00000485532 SUSD4Q5VX71 490 aa16.62■□□□□ 0.25
PRAME-212ENST00000485532 NECTIN2Q92692 538 aa16.62■□□□□ 0.25
PRAME-212ENST00000485532 PDIA6Q15084 440 aa16.61■□□□□ 0.25
PRAME-212ENST00000485532 NEUROD2Q15784 382 aa16.61■□□□□ 0.25
PRAME-212ENST00000485532 LRP10Q7Z4F1 713 aa16.61■□□□□ 0.25
PRAME-212ENST00000485532 NYXQ9GZU5 481 aa16.61■□□□□ 0.25
PRAME-212ENST00000485532 ZNF541Q9H0D2 1346 aa16.61■□□□□ 0.25
PRAME-212ENST00000485532 CRY2Q49AN0 593 aa16.6■□□□□ 0.25
PRAME-212ENST00000485532 C3orf67Q6ZVT6 689 aa16.6■□□□□ 0.25
PRAME-212ENST00000485532 ZNF34Q8IZ26 560 aa16.6■□□□□ 0.25
PRAME-212ENST00000485532 JMYQ8N9B5 988 aa16.6■□□□□ 0.25
PRAME-212ENST00000485532 NTSR2O95665 410 aa16.59■□□□□ 0.25
PRAME-212ENST00000485532 ALDH1B1P30837 517 aa16.59■□□□□ 0.25
PRAME-212ENST00000485532 KRT24Q2M2I5 525 aa16.59■□□□□ 0.25
PRAME-212ENST00000485532 GIGYF2Q6Y7W6 1299 aaKnown RBP16.59■□□□□ 0.25
PRAME-212ENST00000485532 SYNE4Q8N205 404 aa16.59■□□□□ 0.25
PRAME-212ENST00000485532 MYBBP1AQ9BQG0 1328 aaKnown RBP16.59■□□□□ 0.25
PRAME-212ENST00000485532 SNED1Q8TER0 1413 aa16.59■□□□□ 0.25
PRAME-212ENST00000485532 TCERG1O14776 1098 aaKnown RBP16.58■□□□□ 0.24
PRAME-212ENST00000485532 RTKN2Q8IZC4 609 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms