RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 PLVAPQ9BX97 442 aa6.08□□□□□ -1.44
KDM1A-204ENST00000481879 SCHIP1Q9P0W5 487 aaPredicted RBP6.08□□□□□ -1.44
KDM1A-204ENST00000481879 ALAS2P22557 587 aa6.07□□□□□ -1.44
KDM1A-204ENST00000481879 NOS2P35228 1153 aa6.07□□□□□ -1.44
KDM1A-204ENST00000481879 PSME1Q06323 249 aa6.07□□□□□ -1.44
KDM1A-204ENST00000481879 TEAD4Q15561 434 aa6.07□□□□□ -1.44
KDM1A-204ENST00000481879 NFATC2IPQ8NCF5 419 aa6.07□□□□□ -1.44
KDM1A-204ENST00000481879 ZDHHC1Q8WTX9 485 aa6.07□□□□□ -1.44
KDM1A-204ENST00000481879 L3MBTL2Q969R5 705 aa6.07□□□□□ -1.44
KDM1A-204ENST00000481879 TRIM11Q96F44 468 aa6.07□□□□□ -1.44
KDM1A-204ENST00000481879 ALG2Q9H553 416 aa6.07□□□□□ -1.44
KDM1A-204ENST00000481879 NEUROD4Q9HD90 331 aa6.07□□□□□ -1.44
KDM1A-204ENST00000481879 ZNF358Q9NW07 568 aa6.07□□□□□ -1.44
KDM1A-204ENST00000481879 ELOA3CA0A087WX78 387 aaPredicted RBP6.06□□□□□ -1.44
KDM1A-204ENST00000481879 ELOA3DA6NLF2 546 aaPredicted RBP6.06□□□□□ -1.44
KDM1A-204ENST00000481879 ELOA3BQ3SY89 546 aa6.06□□□□□ -1.44
KDM1A-204ENST00000481879 LRRC69Q6ZNQ3 347 aa6.06□□□□□ -1.44
KDM1A-204ENST00000481879 SYT9Q86SS6 491 aa6.06□□□□□ -1.44
KDM1A-204ENST00000481879 ELOA3Q8NG57 546 aa6.06□□□□□ -1.44
KDM1A-204ENST00000481879 COG6Q9Y2V7 657 aa6.06□□□□□ -1.44
KDM1A-204ENST00000481879 EML1O00423 815 aa6.05□□□□□ -1.44
KDM1A-204ENST00000481879 SPATA31C1P0DKV0 1188 aa6.05□□□□□ -1.44
KDM1A-204ENST00000481879 NCOA4Q13772 614 aa6.05□□□□□ -1.44
KDM1A-204ENST00000481879 WWC1Q8IX03 1113 aa6.05□□□□□ -1.44
KDM1A-204ENST00000481879 ZNF232Q9UNY5 417 aa6.05□□□□□ -1.44
KDM1A-204ENST00000481879 SPDYE3A6NKU9 549 aa6.04□□□□□ -1.44
KDM1A-204ENST00000481879 SIN3BO75182 1162 aa6.04□□□□□ -1.44
KDM1A-204ENST00000481879 GATA4P43694 442 aa6.04□□□□□ -1.44
KDM1A-204ENST00000481879 EPHA4P54764 986 aa6.04□□□□□ -1.44
KDM1A-204ENST00000481879 SLC9A9Q8IVB4 645 aa6.04□□□□□ -1.44
KDM1A-204ENST00000481879 TNS4Q8IZW8 715 aa6.04□□□□□ -1.44
KDM1A-204ENST00000481879 C7orf43Q8WVR3 580 aa6.04□□□□□ -1.44
KDM1A-204ENST00000481879 GPC6Q9Y625 555 aaPredicted RBP6.04□□□□□ -1.44
KDM1A-204ENST00000481879 SERTM1A2A2V5 107 aa6.03□□□□□ -1.44
KDM1A-204ENST00000481879 ADARB2-AS1A8MUL3 147 aa6.03□□□□□ -1.44
KDM1A-204ENST00000481879 SFSWAPQ12872 951 aaKnown RBP6.03□□□□□ -1.44
KDM1A-204ENST00000481879 RSPO4Q2I0M5 234 aaPredicted RBP6.03□□□□□ -1.44
KDM1A-204ENST00000481879 TBCELQ5QJ74 424 aa6.03□□□□□ -1.44
KDM1A-204ENST00000481879 DEPDC4Q8N2C3 294 aa6.03□□□□□ -1.44
KDM1A-204ENST00000481879 MDFIQ99750 246 aa6.03□□□□□ -1.44
KDM1A-204ENST00000481879 USP17L5A8MUK1 530 aa6.02□□□□□ -1.45
KDM1A-204ENST00000481879 YBX3P16989 372 aaKnown RBP eCLIP6.02□□□□□ -1.455e-8■□□□□ 8.9
KDM1A-204ENST00000481879 PRRT3Q5FWE3 981 aa6.02□□□□□ -1.45
KDM1A-204ENST00000481879 TRIM50Q86XT4 487 aa6.02□□□□□ -1.45
KDM1A-204ENST00000481879 ZBTB7BO15156 539 aaPredicted RBP6.01□□□□□ -1.45
KDM1A-204ENST00000481879 NKAPLQ5M9Q1 402 aa6.01□□□□□ -1.45
KDM1A-204ENST00000481879 RHPN1Q8TCX5 695 aa6.01□□□□□ -1.45
KDM1A-204ENST00000481879 TNFRSF25Q93038 417 aa6.01□□□□□ -1.45
KDM1A-204ENST00000481879 SLC30A3Q99726 388 aa6.01□□□□□ -1.45
KDM1A-204ENST00000481879 M0R082 166 aa6□□□□□ -1.45
KDM1A-204ENST00000481879 APBA3O96018 575 aa6□□□□□ -1.45
KDM1A-204ENST00000481879 ATP1A2P50993 1020 aa6□□□□□ -1.45
KDM1A-204ENST00000481879 SPEM2Q0P670 501 aa6□□□□□ -1.45
KDM1A-204ENST00000481879 NEUROD1Q13562 356 aa6□□□□□ -1.45
KDM1A-204ENST00000481879 SH3PXD2AQ5TCZ1 1133 aa6□□□□□ -1.45
KDM1A-204ENST00000481879 C1orf53Q5VUE5 145 aa6□□□□□ -1.45
KDM1A-204ENST00000481879 CCDC102BQ68D86 513 aa6□□□□□ -1.45
KDM1A-204ENST00000481879 TPCN2Q8NHX9 752 aa6□□□□□ -1.45
KDM1A-204ENST00000481879 ZNF417Q8TAU3 575 aa6□□□□□ -1.45
KDM1A-204ENST00000481879 ZNF587Q96SQ5 575 aaPredicted RBP6□□□□□ -1.45
KDM1A-204ENST00000481879 PRDM6Q9NQX0 595 aa6□□□□□ -1.45
KDM1A-204ENST00000481879 ANKIB1Q9P2G1 1089 aa6□□□□□ -1.45
KDM1A-204ENST00000481879 CHMP3Q9Y3E7 222 aa6□□□□□ -1.45
KDM1A-204ENST00000481879 STARD13Q9Y3M8 1113 aa6□□□□□ -1.45
KDM1A-204ENST00000481879 HCN4Q9Y3Q4 1203 aa6□□□□□ -1.45
KDM1A-204ENST00000481879 SFI1A8K8P3 1242 aa5.99□□□□□ -1.45
KDM1A-204ENST00000481879 RAD21O60216 631 aa5.99□□□□□ -1.45
KDM1A-204ENST00000481879 PSMA6P60900 246 aaKnown RBP5.99□□□□□ -1.45
KDM1A-204ENST00000481879 TRIM28Q13263 835 aaKnown RBP5.99□□□□□ -1.45
KDM1A-204ENST00000481879 COL9A3Q14050 684 aaPredicted RBP5.99□□□□□ -1.45
KDM1A-204ENST00000481879 MICALL1Q8N3F8 863 aa5.99□□□□□ -1.45
KDM1A-204ENST00000481879 POM121Q96HA1 1249 aa5.99□□□□□ -1.45
KDM1A-204ENST00000481879 CEP63Q96MT8 703 aa5.99□□□□□ -1.45
KDM1A-204ENST00000481879 C8orf86Q6ZUL3 223 aa5.98□□□□□ -1.45
KDM1A-204ENST00000481879 PLEKHM2Q8IWE5 1019 aa5.98□□□□□ -1.45
KDM1A-204ENST00000481879 TSPAN10Q9H1Z9 355 aaPredicted RBP5.98□□□□□ -1.45
KDM1A-204ENST00000481879 BRD7Q9NPI1 651 aa5.98□□□□□ -1.45
KDM1A-204ENST00000481879 KIAA1024Q9UPX6 916 aa5.98□□□□□ -1.45
KDM1A-204ENST00000481879 KCNH4Q9UQ05 1017 aa5.98□□□□□ -1.45
KDM1A-204ENST00000481879 FAM229AH3BQW9 127 aa5.97□□□□□ -1.45
KDM1A-204ENST00000481879 M0R2N6 131 aa5.97□□□□□ -1.45
KDM1A-204ENST00000481879 DYRK3O43781 588 aa5.97□□□□□ -1.45
KDM1A-204ENST00000481879 ALBP02768 609 aa5.97□□□□□ -1.45
KDM1A-204ENST00000481879 ADH7P40394 386 aa5.97□□□□□ -1.45
KDM1A-204ENST00000481879 HIRAP54198 1017 aaPredicted RBP5.97□□□□□ -1.45
KDM1A-204ENST00000481879 KCNQ4P56696 695 aa5.97□□□□□ -1.45
KDM1A-204ENST00000481879 CLDN10P78369 228 aa5.97□□□□□ -1.45
KDM1A-204ENST00000481879 LRP8Q14114 963 aa5.97□□□□□ -1.45
KDM1A-204ENST00000481879 HDGFL1Q5TGJ6 251 aa5.97□□□□□ -1.45
KDM1A-204ENST00000481879 RAB44Q7Z6P3 723 aaPredicted RBP5.97□□□□□ -1.45
KDM1A-204ENST00000481879 LARGE2Q8N3Y3 721 aa5.97□□□□□ -1.45
KDM1A-204ENST00000481879 NACC1Q96RE7 527 aa5.97□□□□□ -1.45
KDM1A-204ENST00000481879 PHACTR1Q9C0D0 580 aa5.97□□□□□ -1.45
KDM1A-204ENST00000481879 USP17L3A6NCW0 530 aa5.96□□□□□ -1.46
KDM1A-204ENST00000481879 USP17L4A6NCW7 530 aa5.96□□□□□ -1.46
KDM1A-204ENST00000481879 PALM3A6NDB9 673 aaPredicted RBP5.96□□□□□ -1.46
KDM1A-204ENST00000481879 POM121CA8CG34 1229 aa5.96□□□□□ -1.46
KDM1A-204ENST00000481879 MCTP1Q6DN14 999 aa5.96□□□□□ -1.46
KDM1A-204ENST00000481879 USP17L2Q6R6M4 530 aa5.96□□□□□ -1.46
KDM1A-204ENST00000481879 POTEAQ6S8J7 498 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms