RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 SNED1Q8TER0 1413 aa12.54□□□□□ -0.4
GTF3C2-210ENST00000480989 KDM3BQ7LBC6 1761 aa12.53□□□□□ -0.4
GTF3C2-210ENST00000480989 ADAMTSL1Q8N6G6 1762 aa12.53□□□□□ -0.4
GTF3C2-210ENST00000480989 SRGNP10124 158 aa12.53□□□□□ -0.4
GTF3C2-210ENST00000480989 DCTN1Q14203 1278 aa12.53□□□□□ -0.4
GTF3C2-210ENST00000480989 OLFM4Q6UX06 510 aa12.53□□□□□ -0.4
GTF3C2-210ENST00000480989 MCM10Q7L590 875 aa12.53□□□□□ -0.4
GTF3C2-210ENST00000480989 C7orf43Q8WVR3 580 aa12.53□□□□□ -0.4
GTF3C2-210ENST00000480989 LTBP3Q9NS15 1303 aa12.53□□□□□ -0.4
GTF3C2-210ENST00000480989 BTBD11A6QL63 1104 aa12.52□□□□□ -0.41
GTF3C2-210ENST00000480989 PDE6BP35913 854 aa12.52□□□□□ -0.41
GTF3C2-210ENST00000480989 PRPF40BQ6NWY9 871 aaKnown RBP12.52□□□□□ -0.41
GTF3C2-210ENST00000480989 SLC51AQ86UW1 340 aa12.52□□□□□ -0.41
GTF3C2-210ENST00000480989 DZIP3Q86Y13 1208 aaKnown RBP12.52□□□□□ -0.41
GTF3C2-210ENST00000480989 CNBD1Q8NA66 436 aa12.52□□□□□ -0.41
GTF3C2-210ENST00000480989 TEX13AQ9BXU3 409 aaPredicted RBP12.52□□□□□ -0.41
GTF3C2-210ENST00000480989 COL4A5P29400 1685 aa12.51□□□□□ -0.41
GTF3C2-210ENST00000480989 DDNO94850 711 aaPredicted RBP12.51□□□□□ -0.41
GTF3C2-210ENST00000480989 ERFEQ4G0M1 354 aa12.51□□□□□ -0.41
GTF3C2-210ENST00000480989 NUP98P52948 1817 aa12.51□□□□□ -0.41
GTF3C2-210ENST00000480989 PPP2R1AP30153 589 aa12.5□□□□□ -0.41
GTF3C2-210ENST00000480989 STYK1Q6J9G0 422 aa12.5□□□□□ -0.41
GTF3C2-210ENST00000480989 PPP4R3CPQ6ZMV5 832 aa12.5□□□□□ -0.41
GTF3C2-210ENST00000480989 SETDB2Q96T68 719 aa12.5□□□□□ -0.41
GTF3C2-210ENST00000480989 TAOK3Q9H2K8 898 aa12.5□□□□□ -0.41
GTF3C2-210ENST00000480989 SCN4AP35499 1836 aa12.5□□□□□ -0.41
GTF3C2-210ENST00000480989 LTBP1Q14766 1721 aa12.49□□□□□ -0.41
GTF3C2-210ENST00000480989 ABCC12Q96J65 1359 aa12.49□□□□□ -0.41
GTF3C2-210ENST00000480989 ZNF541Q9H0D2 1346 aa12.49□□□□□ -0.41
GTF3C2-210ENST00000480989 KLRG2A4D1S0 409 aaPredicted RBP12.49□□□□□ -0.41
GTF3C2-210ENST00000480989 HSPA1AP0DMV8 641 aaKnown RBP12.49□□□□□ -0.41
GTF3C2-210ENST00000480989 HSPA1BP0DMV9 641 aaKnown RBP12.49□□□□□ -0.41
GTF3C2-210ENST00000480989 HLFQ16534 295 aa12.49□□□□□ -0.41
GTF3C2-210ENST00000480989 MASTLQ96GX5 879 aa12.49□□□□□ -0.41
GTF3C2-210ENST00000480989 PDZRN3Q9UPQ7 1066 aa12.49□□□□□ -0.41
GTF3C2-210ENST00000480989 CNKSR1Q969H4 720 aa12.48□□□□□ -0.41
GTF3C2-210ENST00000480989 MIS18AQ9NYP9 233 aa12.48□□□□□ -0.41
GTF3C2-210ENST00000480989 PASKQ96RG2 1323 aa12.47□□□□□ -0.41
GTF3C2-210ENST00000480989 ST5P78524 1137 aa12.47□□□□□ -0.41
GTF3C2-210ENST00000480989 CLEC4GQ6UXB4 293 aa12.47□□□□□ -0.41
GTF3C2-210ENST00000480989 SNRPA1P09661 255 aaKnown RBP12.46□□□□□ -0.41
GTF3C2-210ENST00000480989 U2AF1L5P0DN76 240 aaPredicted RBP12.46□□□□□ -0.41
GTF3C2-210ENST00000480989 U2AF1Q01081 240 aaKnown RBP eCLIP12.46□□□□□ -0.41
GTF3C2-210ENST00000480989 CHADLQ6NUI6 762 aa12.46□□□□□ -0.41
GTF3C2-210ENST00000480989 NBPF5PQ86XG9 351 aaPredicted RBP12.46□□□□□ -0.41
GTF3C2-210ENST00000480989 L3MBTL3Q96JM7 780 aaPredicted RBP12.46□□□□□ -0.41
GTF3C2-210ENST00000480989 FAM177BA6PVY3 158 aa12.45□□□□□ -0.42
GTF3C2-210ENST00000480989 DPY19L2Q6NUT2 758 aa12.45□□□□□ -0.42
GTF3C2-210ENST00000480989 TAF1DQ9H5J8 278 aaPredicted RBP12.45□□□□□ -0.42
GTF3C2-210ENST00000480989 ZNF277Q9NRM2 450 aaPredicted RBP12.45□□□□□ -0.42
GTF3C2-210ENST00000480989 NIP7Q9Y221 180 aaKnown RBP eCLIP12.45□□□□□ -0.42
GTF3C2-210ENST00000480989 UBN2Q6ZU65 1347 aa12.44□□□□□ -0.42
GTF3C2-210ENST00000480989 CAPN15O75808 1086 aa12.44□□□□□ -0.42
GTF3C2-210ENST00000480989 NPR1P16066 1061 aa12.44□□□□□ -0.42
GTF3C2-210ENST00000480989 FKBP4Q02790 459 aaKnown RBP eCLIP12.44□□□□□ -0.42
GTF3C2-210ENST00000480989 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
GTF3C2-210ENST00000480989 CCDC93Q567U6 631 aa12.44□□□□□ -0.42
GTF3C2-210ENST00000480989 CFAP53Q96M91 514 aa12.44□□□□□ -0.42
GTF3C2-210ENST00000480989 PLEKHF1Q96S99 279 aa12.44□□□□□ -0.42
GTF3C2-210ENST00000480989 THUMPD2Q9BTF0 503 aaKnown RBP12.44□□□□□ -0.42
GTF3C2-210ENST00000480989 CREBZFQ9NS37 354 aa12.44□□□□□ -0.42
GTF3C2-210ENST00000480989 MKRN1Q9UHC7 482 aaKnown RBP12.44□□□□□ -0.42
GTF3C2-210ENST00000480989 ITGBL1O95965 494 aaPredicted RBP12.43□□□□□ -0.42
GTF3C2-210ENST00000480989 TTLL7Q6ZT98 887 aa12.43□□□□□ -0.42
GTF3C2-210ENST00000480989 NUTM1Q86Y26 1132 aa12.43□□□□□ -0.42
GTF3C2-210ENST00000480989 TNS4Q8IZW8 715 aa12.43□□□□□ -0.42
GTF3C2-210ENST00000480989 LAMB2P55268 1798 aa12.43□□□□□ -0.42
GTF3C2-210ENST00000480989 CNTNAP1P78357 1384 aa12.43□□□□□ -0.42
GTF3C2-210ENST00000480989 FZD9O00144 591 aa12.42□□□□□ -0.42
GTF3C2-210ENST00000480989 RGL2O15211 777 aa12.42□□□□□ -0.42
GTF3C2-210ENST00000480989 NPHP1O15259 732 aa12.42□□□□□ -0.42
GTF3C2-210ENST00000480989 HTATSF1O43719 755 aaKnown RBP12.42□□□□□ -0.42
GTF3C2-210ENST00000480989 TAF7Q15545 349 aaPredicted RBP12.42□□□□□ -0.42
GTF3C2-210ENST00000480989 CRY2Q49AN0 593 aa12.42□□□□□ -0.42
GTF3C2-210ENST00000480989 C3orf67Q6ZVT6 689 aa12.42□□□□□ -0.42
GTF3C2-210ENST00000480989 LRP10Q7Z4F1 713 aa12.42□□□□□ -0.42
GTF3C2-210ENST00000480989 RIC1Q4ADV7 1423 aa12.42□□□□□ -0.42
GTF3C2-210ENST00000480989 EIF4A1P60842 406 aaKnown RBP12.41□□□□□ -0.42
GTF3C2-210ENST00000480989 SOGA3Q5TF21 947 aa12.41□□□□□ -0.42
GTF3C2-210ENST00000480989 LDHDQ86WU2 507 aa12.41□□□□□ -0.42
GTF3C2-210ENST00000480989 RTF1Q92541 710 aaKnown RBP12.41□□□□□ -0.42
GTF3C2-210ENST00000480989 NUDCQ9Y266 331 aa12.41□□□□□ -0.42
GTF3C2-210ENST00000480989 ZNF652Q9Y2D9 606 aa12.41□□□□□ -0.42
GTF3C2-210ENST00000480989 RNF123Q5XPI4 1314 aa12.4□□□□□ -0.42
GTF3C2-210ENST00000480989 FOXN1O15353 648 aa12.4□□□□□ -0.42
GTF3C2-210ENST00000480989 TPTE2Q6XPS3 522 aa12.4□□□□□ -0.42
GTF3C2-210ENST00000480989 NPM2Q86SE8 214 aaKnown RBP12.4□□□□□ -0.42
GTF3C2-210ENST00000480989 SYNE4Q8N205 404 aa12.4□□□□□ -0.42
GTF3C2-210ENST00000480989 NGEFQ8N5V2 710 aa12.4□□□□□ -0.42
GTF3C2-210ENST00000480989 THSD7BQ9C0I4 1608 aa12.4□□□□□ -0.42
GTF3C2-210ENST00000480989 MAP3K15Q6ZN16 1313 aa12.39□□□□□ -0.43
GTF3C2-210ENST00000480989 ANKRD36CQ5JPF3 1778 aa12.39□□□□□ -0.43
GTF3C2-210ENST00000480989 IARSP41252 1262 aaKnown RBP12.39□□□□□ -0.43
GTF3C2-210ENST00000480989 FMR1Q06787 632 aaKnown RBP eCLIP12.39□□□□□ -0.43
GTF3C2-210ENST00000480989 SUSD4Q5VX71 490 aa12.39□□□□□ -0.43
GTF3C2-210ENST00000480989 TAF1P21675 1872 aa12.39□□□□□ -0.43
GTF3C2-210ENST00000480989 COL4A1P02462 1669 aa12.38□□□□□ -0.43
GTF3C2-210ENST00000480989 IQCA1LA6NCM1 817 aa12.38□□□□□ -0.43
GTF3C2-210ENST00000480989 ERVV-1B6SEH8 477 aa12.38□□□□□ -0.43
GTF3C2-210ENST00000480989 NTSR2O95665 410 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms