RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 TTC12Q9H892 705 aaPredicted RBP10.3□□□□□ -0.76
SNRNP200-203ENST00000480242 AFDNP55196 1824 aaKnown RBP10.3□□□□□ -0.76
SNRNP200-203ENST00000480242 HOXC9P31274 260 aa10.29□□□□□ -0.76
SNRNP200-203ENST00000480242 PSME1Q06323 249 aa10.29□□□□□ -0.76
SNRNP200-203ENST00000480242 NOLC1Q14978 699 aaKnown RBP eCLIP10.29□□□□□ -0.76
SNRNP200-203ENST00000480242 ABTB2Q8N961 1025 aa10.29□□□□□ -0.76
SNRNP200-203ENST00000480242 MIS18AQ9NYP9 233 aa10.29□□□□□ -0.76
SNRNP200-203ENST00000480242 CLEC17AQ6ZS10 378 aa10.29□□□□□ -0.76
SNRNP200-203ENST00000480242 PROSER2Q86WR7 435 aaPredicted RBP10.29□□□□□ -0.76
SNRNP200-203ENST00000480242 FOXO3O43524 673 aa10.28□□□□□ -0.76
SNRNP200-203ENST00000480242 HDAC1Q13547 482 aaPredicted RBP10.28□□□□□ -0.76
SNRNP200-203ENST00000480242 ANKRD45Q5TZF3 282 aa10.28□□□□□ -0.76
SNRNP200-203ENST00000480242 TBC1D9Q6ZT07 1266 aa10.28□□□□□ -0.76
SNRNP200-203ENST00000480242 PAXIP1Q6ZW49 1069 aaPredicted RBP10.28□□□□□ -0.76
SNRNP200-203ENST00000480242 PLCB2Q00722 1185 aa10.28□□□□□ -0.76
SNRNP200-203ENST00000480242 SULT6B1Q6IMI4 303 aa10.28□□□□□ -0.76
SNRNP200-203ENST00000480242 TRIM27P14373 513 aa10.27□□□□□ -0.76
SNRNP200-203ENST00000480242 KCNJ4P48050 445 aa10.27□□□□□ -0.76
SNRNP200-203ENST00000480242 EXOSC9Q06265 439 aaKnown RBP10.27□□□□□ -0.76
SNRNP200-203ENST00000480242 FOXD4L6Q3SYB3 417 aaPredicted RBP10.27□□□□□ -0.76
SNRNP200-203ENST00000480242 FOXD4L3Q6VB84 417 aaPredicted RBP10.27□□□□□ -0.76
SNRNP200-203ENST00000480242 DDX19BQ9UMR2 479 aa10.27□□□□□ -0.76
SNRNP200-203ENST00000480242 ATP10DQ9P241 1426 aa10.27□□□□□ -0.77
SNRNP200-203ENST00000480242 MYH3P11055 1940 aa10.27□□□□□ -0.77
SNRNP200-203ENST00000480242 CHD1LQ86WJ1 897 aa10.27□□□□□ -0.77
SNRNP200-203ENST00000480242 ZGPATQ8N5A5 531 aaKnown RBP10.27□□□□□ -0.77
SNRNP200-203ENST00000480242 DUOX1Q9NRD9 1551 aa10.27□□□□□ -0.77
SNRNP200-203ENST00000480242 ERBB3P21860 1342 aa10.27□□□□□ -0.77
SNRNP200-203ENST00000480242 FAM83GA6ND36 823 aa10.26□□□□□ -0.77
SNRNP200-203ENST00000480242 EIF4A2Q14240 407 aaKnown RBP10.26□□□□□ -0.77
SNRNP200-203ENST00000480242 NUCB1Q02818 461 aa10.26□□□□□ -0.77
SNRNP200-203ENST00000480242 TAF3Q5VWG9 929 aa10.26□□□□□ -0.77
SNRNP200-203ENST00000480242 USHBP1Q8N6Y0 703 aa10.26□□□□□ -0.77
SNRNP200-203ENST00000480242 PIBF1Q8WXW3 757 aa10.26□□□□□ -0.77
SNRNP200-203ENST00000480242 TSPY26PQ9H489 355 aa10.26□□□□□ -0.77
SNRNP200-203ENST00000480242 TMEM57Q8N5G2 664 aa10.26□□□□□ -0.77
SNRNP200-203ENST00000480242 CHMP4AQ9BY43 222 aa10.26□□□□□ -0.77
SNRNP200-203ENST00000480242 USP25Q9UHP3 1055 aa10.26□□□□□ -0.77
SNRNP200-203ENST00000480242 BMP2KLQ5H9B9 411 aa10.25□□□□□ -0.77
SNRNP200-203ENST00000480242 SLC4A10Q6U841 1118 aa10.25□□□□□ -0.77
SNRNP200-203ENST00000480242 RTF1Q92541 710 aaKnown RBP10.25□□□□□ -0.77
SNRNP200-203ENST00000480242 CSB-PGBD3P0DP91 1061 aa10.24□□□□□ -0.77
SNRNP200-203ENST00000480242 GTF2F1P35269 517 aaKnown RBP eCLIP10.24□□□□□ -0.77
SNRNP200-203ENST00000480242 CHAF1AQ13111 956 aaPredicted RBP10.24□□□□□ -0.77
SNRNP200-203ENST00000480242 HSP90AB2PQ58FF8 381 aa10.24□□□□□ -0.77
SNRNP200-203ENST00000480242 NOB1Q9ULX3 412 aaKnown RBP10.24□□□□□ -0.77
SNRNP200-203ENST00000480242 RIOK3O14730 519 aaKnown RBP10.24□□□□□ -0.77
SNRNP200-203ENST00000480242 SSH1Q8WYL5 1049 aa10.24□□□□□ -0.77
SNRNP200-203ENST00000480242 SPATA31A6Q5VVP1 1343 aa10.23□□□□□ -0.77
SNRNP200-203ENST00000480242 AEBP1Q8IUX7 1158 aa10.23□□□□□ -0.77
SNRNP200-203ENST00000480242 C1orf115Q9H7X2 142 aa10.23□□□□□ -0.77
SNRNP200-203ENST00000480242 NUP98P52948 1817 aa10.23□□□□□ -0.77
SNRNP200-203ENST00000480242 ZC3H6P61129 1189 aaKnown RBP10.23□□□□□ -0.77
SNRNP200-203ENST00000480242 ATF7IPQ6VMQ6 1270 aa10.23□□□□□ -0.77
SNRNP200-203ENST00000480242 CYP2E1P05181 493 aaPredicted RBP10.23□□□□□ -0.77
SNRNP200-203ENST00000480242 IRX5P78411 483 aaPredicted RBP10.23□□□□□ -0.77
SNRNP200-203ENST00000480242 RABEP1Q15276 862 aa10.23□□□□□ -0.77
SNRNP200-203ENST00000480242 MCM10Q7L590 875 aa10.23□□□□□ -0.77
SNRNP200-203ENST00000480242 SLAIN2Q9P270 581 aa10.23□□□□□ -0.77
SNRNP200-203ENST00000480242 SPEF2Q9C093 1822 aa10.22□□□□□ -0.77
SNRNP200-203ENST00000480242 RGL2O15211 777 aa10.22□□□□□ -0.77
SNRNP200-203ENST00000480242 ONECUT3O60422 494 aaPredicted RBP10.22□□□□□ -0.77
SNRNP200-203ENST00000480242 ATF3P18847 181 aa10.22□□□□□ -0.77
SNRNP200-203ENST00000480242 TMPOP42166 694 aaKnown RBP10.22□□□□□ -0.77
SNRNP200-203ENST00000480242 PHACTR3Q96KR7 559 aa10.22□□□□□ -0.77
SNRNP200-203ENST00000480242 ZDHHC9Q9Y397 364 aa10.22□□□□□ -0.77
SNRNP200-203ENST00000480242 DOCK2Q92608 1830 aa10.22□□□□□ -0.77
SNRNP200-203ENST00000480242 ADCY5O95622 1261 aa10.22□□□□□ -0.77
SNRNP200-203ENST00000480242 DDX17Q92841 729 aaKnown RBP10.21□□□□□ -0.77
SNRNP200-203ENST00000480242 TRERF1Q96PN7 1200 aa10.21□□□□□ -0.77
SNRNP200-203ENST00000480242 MAP3K5Q99683 1374 aa10.21□□□□□ -0.77
SNRNP200-203ENST00000480242 JCADQ9P266 1359 aa10.21□□□□□ -0.77
SNRNP200-203ENST00000480242 ERICH4A6NGS2 130 aa10.21□□□□□ -0.77
SNRNP200-203ENST00000480242 MBD3O95983 291 aa10.21□□□□□ -0.77
SNRNP200-203ENST00000480242 FKBP5Q13451 457 aaPredicted RBP10.21□□□□□ -0.77
SNRNP200-203ENST00000480242 GDPD2Q9HCC8 539 aa10.21□□□□□ -0.77
SNRNP200-203ENST00000480242 DIAPH3Q9NSV4 1193 aa10.21□□□□□ -0.77
SNRNP200-203ENST00000480242 ZBTB40Q9NUA8 1239 aa10.21□□□□□ -0.77
SNRNP200-203ENST00000480242 CDC45O75419 566 aa10.21□□□□□ -0.78
SNRNP200-203ENST00000480242 EIF2S2P20042 333 aaKnown RBP10.21□□□□□ -0.78
SNRNP200-203ENST00000480242 ORAI2Q96SN7 254 aa10.21□□□□□ -0.78
SNRNP200-203ENST00000480242 RIC1Q4ADV7 1423 aa10.21□□□□□ -0.78
SNRNP200-203ENST00000480242 WDR17Q8IZU2 1322 aa10.2□□□□□ -0.78
SNRNP200-203ENST00000480242 NOL8Q76FK4 1167 aaKnown RBP10.2□□□□□ -0.78
SNRNP200-203ENST00000480242 CERS3Q8IU89 383 aa10.2□□□□□ -0.78
SNRNP200-203ENST00000480242 HOXB7P09629 217 aa10.2□□□□□ -0.78
SNRNP200-203ENST00000480242 NFE2L2Q16236 605 aa10.2□□□□□ -0.78
SNRNP200-203ENST00000480242 CWC22Q9HCG8 908 aaKnown RBP10.2□□□□□ -0.78
SNRNP200-203ENST00000480242 OGFRQ9NZT2 677 aa10.2□□□□□ -0.78
SNRNP200-203ENST00000480242 ZNF330Q9Y3S2 320 aaPredicted RBP10.2□□□□□ -0.78
SNRNP200-203ENST00000480242 SPC24Q8NBT2 197 aa10.19□□□□□ -0.78
SNRNP200-203ENST00000480242 IFT57Q9NWB7 429 aa10.19□□□□□ -0.78
SNRNP200-203ENST00000480242 ST18O60284 1047 aa10.19□□□□□ -0.78
SNRNP200-203ENST00000480242 BRCA1P38398 1863 aaKnown RBP10.19□□□□□ -0.78
SNRNP200-203ENST00000480242 KRT24Q2M2I5 525 aa10.19□□□□□ -0.78
SNRNP200-203ENST00000480242 SYAP1Q96A49 352 aaPredicted RBP10.19□□□□□ -0.78
SNRNP200-203ENST00000480242 THRAP3Q9Y2W1 955 aaKnown RBP10.19□□□□□ -0.78
SNRNP200-203ENST00000480242 BARGINQ6ZT62 677 aa10.19□□□□□ -0.78
SNRNP200-203ENST00000480242 FEZ1Q99689 392 aa10.19□□□□□ -0.78
SNRNP200-203ENST00000480242 PSME4Q14997 1843 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms