RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 ZNF541Q9H0D2 1346 aa19.65■□□□□ 0.74
USP11-207ENST00000478596 ANKRD31Q8N7Z5 1873 aa19.65■□□□□ 0.74
USP11-207ENST00000478596 PRR5LQ6MZQ0 368 aa19.64■□□□□ 0.73
USP11-207ENST00000478596 CYP4F22Q6NT55 531 aa19.64■□□□□ 0.73
USP11-207ENST00000478596 BICDL1Q6ZP65 573 aa19.64■□□□□ 0.73
USP11-207ENST00000478596 COL11A2P13942 1736 aaPredicted RBP19.64■□□□□ 0.73
USP11-207ENST00000478596 LTBP1Q14766 1721 aa19.64■□□□□ 0.73
USP11-207ENST00000478596 PRPF38BQ5VTL8 546 aaKnown RBP19.63■□□□□ 0.73
USP11-207ENST00000478596 RNF123Q5XPI4 1314 aa19.62■□□□□ 0.73
USP11-207ENST00000478596 SRGNP10124 158 aa19.62■□□□□ 0.73
USP11-207ENST00000478596 PAXIP1Q6ZW49 1069 aaPredicted RBP19.62■□□□□ 0.73
USP11-207ENST00000478596 C7orf43Q8WVR3 580 aa19.62■□□□□ 0.73
USP11-207ENST00000478596 TBC1D9BQ66K14 1250 aa19.61■□□□□ 0.73
USP11-207ENST00000478596 DGKZQ13574 1117 aa19.6■□□□□ 0.73
USP11-207ENST00000478596 CCDC93Q567U6 631 aa19.6■□□□□ 0.73
USP11-207ENST00000478596 MASTLQ96GX5 879 aa19.6■□□□□ 0.73
USP11-207ENST00000478596 TLL2Q9Y6L7 1015 aa19.6■□□□□ 0.73
USP11-207ENST00000478596 A0A087WZG4 1122 aa19.59■□□□□ 0.73
USP11-207ENST00000478596 FZD9O00144 591 aa19.59■□□□□ 0.73
USP11-207ENST00000478596 EIF5P55010 431 aaKnown RBP19.59■□□□□ 0.73
USP11-207ENST00000478596 FKBP4Q02790 459 aaKnown RBP eCLIP19.59■□□□□ 0.73
USP11-207ENST00000478596 GRM1Q13255 1194 aa19.59■□□□□ 0.73
USP11-207ENST00000478596 VSIG10Q8N0Z9 540 aa19.59■□□□□ 0.73
USP11-207ENST00000478596 GPC2Q8N158 579 aa19.59■□□□□ 0.73
USP11-207ENST00000478596 CCDC24Q8N4L8 307 aa19.59■□□□□ 0.73
USP11-207ENST00000478596 SLC52A2Q9HAB3 445 aa19.59■□□□□ 0.73
USP11-207ENST00000478596 SLX4Q8IY92 1834 aa19.59■□□□□ 0.73
USP11-207ENST00000478596 CST9Q5W186 159 aa19.58■□□□□ 0.72
USP11-207ENST00000478596 AOC2O75106 756 aa19.57■□□□□ 0.72
USP11-207ENST00000478596 BRPF1P55201 1214 aaPredicted RBP19.57■□□□□ 0.72
USP11-207ENST00000478596 ZNF277Q9NRM2 450 aaPredicted RBP19.57■□□□□ 0.72
USP11-207ENST00000478596 CANXP27824 592 aaKnown RBP19.56■□□□□ 0.72
USP11-207ENST00000478596 CNBD1Q8NA66 436 aa19.56■□□□□ 0.72
USP11-207ENST00000478596 ARFGEF2Q9Y6D5 1785 aa19.56■□□□□ 0.72
USP11-207ENST00000478596 FMR1Q06787 632 aaKnown RBP eCLIP19.55■□□□□ 0.723e-12■■■■■ 43.2
USP11-207ENST00000478596 AEBP1Q8IUX7 1158 aa19.55■□□□□ 0.72
USP11-207ENST00000478596 MRC1P22897 1456 aa19.54■□□□□ 0.72
USP11-207ENST00000478596 ST5P78524 1137 aa19.54■□□□□ 0.72
USP11-207ENST00000478596 DDX10Q13206 875 aaKnown RBP19.54■□□□□ 0.72
USP11-207ENST00000478596 SLC39A6Q13433 755 aa19.54■□□□□ 0.72
USP11-207ENST00000478596 HHIPL1Q96JK4 782 aa19.54■□□□□ 0.72
USP11-207ENST00000478596 SCN11AQ9UI33 1791 aa19.53■□□□□ 0.72
USP11-207ENST00000478596 AKAP4Q5JQC9 854 aa19.53■□□□□ 0.72
USP11-207ENST00000478596 RTKN2Q8IZC4 609 aa19.53■□□□□ 0.72
USP11-207ENST00000478596 STARD3NLO95772 234 aa19.52■□□□□ 0.72
USP11-207ENST00000478596 IARSP41252 1262 aaKnown RBP19.52■□□□□ 0.72
USP11-207ENST00000478596 SAPCD2Q86UD0 394 aa19.52■□□□□ 0.72
USP11-207ENST00000478596 SETDB2Q96T68 719 aa19.52■□□□□ 0.72
USP11-207ENST00000478596 PANK3Q9H999 370 aa19.52■□□□□ 0.72
USP11-207ENST00000478596 SCN7AQ01118 1682 aa19.52■□□□□ 0.71
USP11-207ENST00000478596 SOX10P56693 466 aa19.51■□□□□ 0.71
USP11-207ENST00000478596 LGR6Q9HBX8 967 aa19.51■□□□□ 0.71
USP11-207ENST00000478596 TRAF5O00463 557 aa19.5■□□□□ 0.71
USP11-207ENST00000478596 NPHP1O15259 732 aa19.5■□□□□ 0.71
USP11-207ENST00000478596 NPR1P16066 1061 aa19.5■□□□□ 0.71
USP11-207ENST00000478596 LMOD1P29536 600 aaPredicted RBP19.5■□□□□ 0.71
USP11-207ENST00000478596 TNNT2P45379 298 aaPredicted RBP19.5■□□□□ 0.71
USP11-207ENST00000478596 KNSTRNQ9Y448 316 aa19.5■□□□□ 0.71
USP11-207ENST00000478596 KLRG2A4D1S0 409 aaPredicted RBP19.49■□□□□ 0.71
USP11-207ENST00000478596 CNGB1Q14028 1251 aaPredicted RBP19.49■□□□□ 0.71
USP11-207ENST00000478596 USP50Q70EL3 339 aaPredicted RBP19.49■□□□□ 0.71
USP11-207ENST00000478596 TBC1D2BQ9UPU7 963 aa19.49■□□□□ 0.71
USP11-207ENST00000478596 CASP8AP2Q9UKL3 1982 aa19.49■□□□□ 0.71
USP11-207ENST00000478596 SCNN1DP51172 638 aa19.48■□□□□ 0.71
USP11-207ENST00000478596 SULT6B1Q6IMI4 303 aa19.48■□□□□ 0.71
USP11-207ENST00000478596 RNMTO43148 476 aaKnown RBP19.47■□□□□ 0.71
USP11-207ENST00000478596 CIAPIN1Q6FI81 312 aa19.47■□□□□ 0.71
USP11-207ENST00000478596 OLFM4Q6UX06 510 aa19.47■□□□□ 0.71
USP11-207ENST00000478596 SYNE4Q8N205 404 aa19.47■□□□□ 0.71
USP11-207ENST00000478596 JDP2Q8WYK2 163 aa19.47■□□□□ 0.71
USP11-207ENST00000478596 CACNA1SQ13698 1873 aa19.46■□□□□ 0.71
USP11-207ENST00000478596 CAMTA2O94983 1202 aa19.46■□□□□ 0.71
USP11-207ENST00000478596 IL6STP40189 918 aaPredicted RBP19.46■□□□□ 0.71
USP11-207ENST00000478596 EPS15P42566 896 aa19.46■□□□□ 0.71
USP11-207ENST00000478596 EIF6P56537 245 aaKnown RBP19.45■□□□□ 0.7
USP11-207ENST00000478596 PSMD1Q99460 953 aa19.45■□□□□ 0.7
USP11-207ENST00000478596 GJA3Q9Y6H8 435 aa19.45■□□□□ 0.7
USP11-207ENST00000478596 TRPM7Q96QT4 1865 aa19.45■□□□□ 0.7
USP11-207ENST00000478596 SNED1Q8TER0 1413 aa19.44■□□□□ 0.7
USP11-207ENST00000478596 CELF2O95319 508 aaKnown RBP19.44■□□□□ 0.7
USP11-207ENST00000478596 NOGQ13253 232 aa19.43■□□□□ 0.7
USP11-207ENST00000478596 GCC1Q96CN9 775 aa19.43■□□□□ 0.7
USP11-207ENST00000478596 TEX13AQ9BXU3 409 aaPredicted RBP19.43■□□□□ 0.7
USP11-207ENST00000478596 UBR2Q8IWV8 1755 aa19.42■□□□□ 0.7
USP11-207ENST00000478596 NBPF5PQ86XG9 351 aaPredicted RBP19.42■□□□□ 0.7
USP11-207ENST00000478596 ZNF330Q9Y3S2 320 aaPredicted RBP19.42■□□□□ 0.7
USP11-207ENST00000478596 BCORQ6W2J9 1755 aa19.42■□□□□ 0.7
USP11-207ENST00000478596 ALDH1B1P30837 517 aa19.41■□□□□ 0.7
USP11-207ENST00000478596 TTC5Q8N0Z6 440 aa19.41■□□□□ 0.7
USP11-207ENST00000478596 SAGE1Q9NXZ1 904 aa19.41■□□□□ 0.7
USP11-207ENST00000478596 COL4A5P29400 1685 aa19.4■□□□□ 0.7
USP11-207ENST00000478596 CC2D1BQ5T0F9 858 aaKnown RBP19.39■□□□□ 0.69
USP11-207ENST00000478596 CLEC4GQ6UXB4 293 aa19.39■□□□□ 0.69
USP11-207ENST00000478596 NPM2Q86SE8 214 aaKnown RBP19.39■□□□□ 0.69
USP11-207ENST00000478596 ZNF496Q96IT1 587 aaPredicted RBP19.39■□□□□ 0.69
USP11-207ENST00000478596 ZIC5Q96T25 663 aa19.39■□□□□ 0.69
USP11-207ENST00000478596 ADARB2Q9NS39 739 aaKnown RBP19.39■□□□□ 0.69
USP11-207ENST00000478596 HEG1Q9ULI3 1381 aa19.39■□□□□ 0.69
USP11-207ENST00000478596 IL13P35225 146 aa19.38■□□□□ 0.69
USP11-207ENST00000478596 CC2D2BQ6DHV5 1058 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms