RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 CABLES1Q8TDN4 633 aa10.2□□□□□ -0.78
USP33-208ENST00000477949 FOXJ1Q92949 421 aa10.2□□□□□ -0.78
USP33-208ENST00000477949 KLF16Q9BXK1 252 aaPredicted RBP10.2□□□□□ -0.78
USP33-208ENST00000477949 ROBO2Q9HCK4 1378 aa10.2□□□□□ -0.78
USP33-208ENST00000477949 MAP10Q9P2G4 905 aa10.2□□□□□ -0.78
USP33-208ENST00000477949 ANKRD50Q9ULJ7 1429 aa10.2□□□□□ -0.78
USP33-208ENST00000477949 NWD2Q9ULI1 1742 aa10.19□□□□□ -0.78
USP33-208ENST00000477949 CDC42BPGQ6DT37 1551 aa10.19□□□□□ -0.78
USP33-208ENST00000477949 NEXMIFQ5QGS0 1516 aa10.19□□□□□ -0.78
USP33-208ENST00000477949 BAG6P46379 1132 aa10.19□□□□□ -0.78
USP33-208ENST00000477949 CSPP1Q1MSJ5 1256 aa10.19□□□□□ -0.78
USP33-208ENST00000477949 CHIC2Q9UKJ5 165 aa10.19□□□□□ -0.78
USP33-208ENST00000477949 NPHP3Q7Z494 1330 aa10.18□□□□□ -0.78
USP33-208ENST00000477949 ARID5BQ14865 1188 aa10.18□□□□□ -0.78
USP33-208ENST00000477949 VPS72Q15906 364 aa10.18□□□□□ -0.78
USP33-208ENST00000477949 KRT27Q7Z3Y8 459 aa10.18□□□□□ -0.78
USP33-208ENST00000477949 ABCA3Q99758 1704 aa10.17□□□□□ -0.78
USP33-208ENST00000477949 H3BM21 787 aa10.17□□□□□ -0.78
USP33-208ENST00000477949 GMPRP36959 345 aa10.17□□□□□ -0.78
USP33-208ENST00000477949 C1QTNF8P60827 252 aa10.17□□□□□ -0.78
USP33-208ENST00000477949 AGERQ15109 404 aa10.17□□□□□ -0.78
USP33-208ENST00000477949 TUSC1Q2TAM9 212 aa10.17□□□□□ -0.78
USP33-208ENST00000477949 BPHLQ86WA6 291 aaPredicted RBP10.17□□□□□ -0.78
USP33-208ENST00000477949 NRAPQ86VF7 1730 aa10.16□□□□□ -0.78
USP33-208ENST00000477949 CAMTA1Q9Y6Y1 1673 aa10.16□□□□□ -0.78
USP33-208ENST00000477949 PER1O15534 1290 aaPredicted RBP10.16□□□□□ -0.78
USP33-208ENST00000477949 VEGFBP49765 207 aa10.16□□□□□ -0.78
USP33-208ENST00000477949 NR5A1Q13285 461 aa10.16□□□□□ -0.78
USP33-208ENST00000477949 ARMC2Q8NEN0 867 aa10.16□□□□□ -0.78
USP33-208ENST00000477949 PURBQ96QR8 312 aaKnown RBP10.16□□□□□ -0.78
USP33-208ENST00000477949 RREB1Q92766 1687 aa10.15□□□□□ -0.78
USP33-208ENST00000477949 FAM181BA6NEQ2 426 aa10.15□□□□□ -0.78
USP33-208ENST00000477949 XPCQ01831 940 aaPredicted RBP10.15□□□□□ -0.78
USP33-208ENST00000477949 PDE4DQ08499 809 aa10.15□□□□□ -0.78
USP33-208ENST00000477949 MYSM1Q5VVJ2 828 aa10.15□□□□□ -0.78
USP33-208ENST00000477949 LIMD1Q9UGP4 676 aa10.15□□□□□ -0.78
USP33-208ENST00000477949 THSD7AQ9UPZ6 1657 aa10.15□□□□□ -0.79
USP33-208ENST00000477949 LILRB3O75022 631 aa10.14□□□□□ -0.79
USP33-208ENST00000477949 GRM5P41594 1212 aa10.14□□□□□ -0.79
USP33-208ENST00000477949 C4orf48Q5BLP8 95 aa10.14□□□□□ -0.79
USP33-208ENST00000477949 TSC1Q92574 1164 aa10.14□□□□□ -0.79
USP33-208ENST00000477949 NUP188Q5SRE5 1749 aa10.13□□□□□ -0.79
USP33-208ENST00000477949 SPATA31A3Q5VYP0 1347 aa10.13□□□□□ -0.79
USP33-208ENST00000477949 FOXO3O43524 673 aa10.13□□□□□ -0.79
USP33-208ENST00000477949 ZIC2O95409 532 aaPredicted RBP10.13□□□□□ -0.79
USP33-208ENST00000477949 QPCTQ16769 361 aa10.13□□□□□ -0.79
USP33-208ENST00000477949 CAMKK2Q96RR4 588 aa10.13□□□□□ -0.79
USP33-208ENST00000477949 HFM1A2PYH4 1435 aa10.13□□□□□ -0.79
USP33-208ENST00000477949 NINLQ9Y2I6 1382 aa10.13□□□□□ -0.79
USP33-208ENST00000477949 EZH2Q15910 746 aaKnown RBP10.12□□□□□ -0.79
USP33-208ENST00000477949 ZSCAN1Q8NBB4 408 aa10.12□□□□□ -0.79
USP33-208ENST00000477949 ZNF784Q8NCA9 323 aaPredicted RBP10.12□□□□□ -0.79
USP33-208ENST00000477949 ZFAND3Q9H8U3 227 aa10.12□□□□□ -0.79
USP33-208ENST00000477949 CLTCL1P53675 1640 aa10.11□□□□□ -0.79
USP33-208ENST00000477949 ERBB4Q15303 1308 aa10.11□□□□□ -0.79
USP33-208ENST00000477949 ADGRB2O60241 1585 aa10.11□□□□□ -0.79
USP33-208ENST00000477949 ITPKCQ96DU7 683 aa10.11□□□□□ -0.79
USP33-208ENST00000477949 KIF1AQ12756 1690 aa10.1□□□□□ -0.79
USP33-208ENST00000477949 NR3C2P08235 984 aa10.1□□□□□ -0.79
USP33-208ENST00000477949 ESCO1Q5FWF5 840 aa10.1□□□□□ -0.79
USP33-208ENST00000477949 FAM182BQ5T319 152 aa10.1□□□□□ -0.79
USP33-208ENST00000477949 LORP23490 312 aaPredicted RBP10.09□□□□□ -0.79
USP33-208ENST00000477949 RTL5Q5HYW3 569 aaPredicted RBP10.09□□□□□ -0.79
USP33-208ENST00000477949 HELBQ8NG08 1087 aaPredicted RBP10.09□□□□□ -0.79
USP33-208ENST00000477949 RSPH6AQ9H0K4 717 aa10.09□□□□□ -0.79
USP33-208ENST00000477949 FMN2Q9NZ56 1722 aa10.09□□□□□ -0.79
USP33-208ENST00000477949 CCDC144AA2RUR9 1427 aa10.08□□□□□ -0.8
USP33-208ENST00000477949 NAIPQ13075 1403 aa10.08□□□□□ -0.8
USP33-208ENST00000477949 TNS3Q68CZ2 1445 aa10.08□□□□□ -0.8
USP33-208ENST00000477949 SOBPA7XYQ1 873 aa10.08□□□□□ -0.8
USP33-208ENST00000477949 MAN1A2O60476 641 aa10.08□□□□□ -0.8
USP33-208ENST00000477949 NBPF14Q5TI25 921 aa10.08□□□□□ -0.8
USP33-208ENST00000477949 SH3RF1Q7Z6J0 888 aa10.08□□□□□ -0.8
USP33-208ENST00000477949 C1QTNF2Q9BXJ5 285 aa10.08□□□□□ -0.8
USP33-208ENST00000477949 LRPPRCP42704 1394 aaKnown RBP10.08□□□□□ -0.8
USP33-208ENST00000477949 PARD3Q8TEW0 1356 aa10.08□□□□□ -0.8
USP33-208ENST00000477949 UPP2O95045 317 aa10.07□□□□□ -0.8
USP33-208ENST00000477949 C6orf118Q5T5N4 469 aa10.07□□□□□ -0.8
USP33-208ENST00000477949 SLC24A3Q9HC58 644 aa10.07□□□□□ -0.8
USP33-208ENST00000477949 FAM83GA6ND36 823 aa10.06□□□□□ -0.8
USP33-208ENST00000477949 MAP4K5Q9Y4K4 846 aa10.06□□□□□ -0.8
USP33-208ENST00000477949 TECPR2O15040 1411 aa10.06□□□□□ -0.8
USP33-208ENST00000477949 CASZ1Q86V15 1759 aa10.06□□□□□ -0.8
USP33-208ENST00000477949 BMP2P12643 396 aa10.05□□□□□ -0.8
USP33-208ENST00000477949 CLK2P49760 499 aaKnown RBP10.05□□□□□ -0.8
USP33-208ENST00000477949 VASH1Q7L8A9 365 aaPredicted RBP10.05□□□□□ -0.8
USP33-208ENST00000477949 SH3BP5LQ7L8J4 393 aa10.05□□□□□ -0.8
USP33-208ENST00000477949 TRMT44Q8IYL2 757 aaKnown RBP10.05□□□□□ -0.8
USP33-208ENST00000477949 GPKOWQ92917 476 aaPredicted RBP eCLIP10.05□□□□□ -0.82e-11■■□□□ 14.1
USP33-208ENST00000477949 CCDC9Q9Y3X0 531 aaKnown RBP10.05□□□□□ -0.8
USP33-208ENST00000477949 NRKQ7Z2Y5 1582 aa10.05□□□□□ -0.8
USP33-208ENST00000477949 CRYBG1Q9Y4K1 1723 aa10.04□□□□□ -0.8
USP33-208ENST00000477949 COL14A1Q05707 1796 aaKnown RBP10.04□□□□□ -0.8
USP33-208ENST00000477949 VSIG8P0DPA2 414 aa10.04□□□□□ -0.8
USP33-208ENST00000477949 ZNF326Q5BKZ1 582 aaKnown RBP10.04□□□□□ -0.8
USP33-208ENST00000477949 SPON1Q9HCB6 807 aa10.04□□□□□ -0.8
USP33-208ENST00000477949 POLR3EQ9NVU0 708 aa10.04□□□□□ -0.8
USP33-208ENST00000477949 SPATA31A5Q5VU36 1347 aa10.04□□□□□ -0.8
USP33-208ENST00000477949 SPATA31A7Q8IWB4 1347 aa10.04□□□□□ -0.8
USP33-208ENST00000477949 CHD4Q14839 1912 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms