RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 KAT6BQ8WYB5 2073 aa12.91□□□□□ -0.34
LSS-208ENST00000474319 PRAMEF22A3QJZ6 481 aa12.91□□□□□ -0.34
LSS-208ENST00000474319 ADCK5Q3MIX3 580 aa12.91□□□□□ -0.34
LSS-208ENST00000474319 CKAP2LQ8IYA6 745 aa12.91□□□□□ -0.34
LSS-208ENST00000474319 CWF19L2Q2TBE0 894 aaKnown RBP12.9□□□□□ -0.34
LSS-208ENST00000474319 C1orf141Q5JVX7 400 aa12.9□□□□□ -0.34
LSS-208ENST00000474319 TOM1L2Q6ZVM7 507 aa12.9□□□□□ -0.34
LSS-208ENST00000474319 C9orf78Q9NZ63 289 aaPredicted RBP12.9□□□□□ -0.34
LSS-208ENST00000474319 SYT1P21579 422 aa12.9□□□□□ -0.34
LSS-208ENST00000474319 RAPGEF4Q8WZA2 1011 aa12.9□□□□□ -0.34
LSS-208ENST00000474319 SYAP1Q96A49 352 aaPredicted RBP12.9□□□□□ -0.34
LSS-208ENST00000474319 PTH1RQ03431 593 aa12.9□□□□□ -0.34
LSS-208ENST00000474319 SLAIN2Q9P270 581 aa12.9□□□□□ -0.34
LSS-208ENST00000474319 EDC3Q96F86 508 aaKnown RBP12.89□□□□□ -0.35
LSS-208ENST00000474319 SNX14Q9Y5W7 946 aa12.89□□□□□ -0.35
LSS-208ENST00000474319 FLT4P35916 1363 aa12.89□□□□□ -0.35
LSS-208ENST00000474319 KIAA2012Q0VF49 1180 aa12.89□□□□□ -0.35
LSS-208ENST00000474319 SYTL4Q96C24 671 aaPredicted RBP12.89□□□□□ -0.35
LSS-208ENST00000474319 GJB2P29033 226 aa12.89□□□□□ -0.35
LSS-208ENST00000474319 CLEC17AQ6ZS10 378 aa12.89□□□□□ -0.35
LSS-208ENST00000474319 DRC7Q8IY82 874 aa12.89□□□□□ -0.35
LSS-208ENST00000474319 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.89□□□□□ -0.35
LSS-208ENST00000474319 CDK12Q9NYV4 1490 aaPredicted RBP12.88□□□□□ -0.35
LSS-208ENST00000474319 WDR33Q9C0J8 1336 aaKnown RBP12.88□□□□□ -0.35
LSS-208ENST00000474319 IGSF3O75054 1194 aa12.88□□□□□ -0.35
LSS-208ENST00000474319 SLC39A6Q13433 755 aa12.88□□□□□ -0.35
LSS-208ENST00000474319 RUFY3Q7L099 469 aa12.88□□□□□ -0.35
LSS-208ENST00000474319 STX6O43752 255 aa12.88□□□□□ -0.35
LSS-208ENST00000474319 CHGBP05060 677 aa12.88□□□□□ -0.35
LSS-208ENST00000474319 BOLA2Q9H3K6 86 aa12.88□□□□□ -0.35
LSS-208ENST00000474319 TECPR2O15040 1411 aa12.88□□□□□ -0.35
LSS-208ENST00000474319 KCNH5Q8NCM2 988 aa12.88□□□□□ -0.35
LSS-208ENST00000474319 PDCL3Q9H2J4 239 aa12.88□□□□□ -0.35
LSS-208ENST00000474319 A0A087WWV3 80 aa12.87□□□□□ -0.35
LSS-208ENST00000474319 IFIT2P09913 472 aaKnown RBP12.87□□□□□ -0.35
LSS-208ENST00000474319 AACSQ86V21 672 aa12.87□□□□□ -0.35
LSS-208ENST00000474319 DDX11Q96FC9 970 aa12.87□□□□□ -0.35
LSS-208ENST00000474319 FAM227BQ96M60 508 aa12.87□□□□□ -0.35
LSS-208ENST00000474319 LRRC2Q9BYS8 371 aa12.87□□□□□ -0.35
LSS-208ENST00000474319 ARHGAP23Q9P227 1491 aa12.87□□□□□ -0.35
LSS-208ENST00000474319 PDLIM2Q96JY6 352 aa12.87□□□□□ -0.35
LSS-208ENST00000474319 PROSER3Q2NL68 480 aa12.87□□□□□ -0.35
LSS-208ENST00000474319 CNTROBQ8N137 903 aa12.87□□□□□ -0.35
LSS-208ENST00000474319 ZHX1Q9UKY1 873 aaPredicted RBP12.87□□□□□ -0.35
LSS-208ENST00000474319 MYL6BP14649 208 aa12.86□□□□□ -0.35
LSS-208ENST00000474319 PDRG1Q9NUG6 133 aa12.86□□□□□ -0.35
LSS-208ENST00000474319 DLC1Q96QB1 1528 aa12.86□□□□□ -0.35
LSS-208ENST00000474319 SPDYE4A6NLX3 237 aa12.86□□□□□ -0.35
LSS-208ENST00000474319 TAF6LQ9Y6J9 622 aa12.86□□□□□ -0.35
LSS-208ENST00000474319 CRB1P82279 1406 aa12.86□□□□□ -0.35
LSS-208ENST00000474319 AATKQ6ZMQ8 1374 aa12.86□□□□□ -0.35
LSS-208ENST00000474319 ZSCAN22P10073 491 aaPredicted RBP12.86□□□□□ -0.35
LSS-208ENST00000474319 CBX1P83916 185 aa12.86□□□□□ -0.35
LSS-208ENST00000474319 DIP2AQ14689 1571 aa12.86□□□□□ -0.35
LSS-208ENST00000474319 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
LSS-208ENST00000474319 IBTKQ9P2D0 1353 aaPredicted RBP12.85□□□□□ -0.35
LSS-208ENST00000474319 GOLGA6L4A6NEF3 574 aa12.85□□□□□ -0.35
LSS-208ENST00000474319 MCM2P49736 904 aa12.85□□□□□ -0.35
LSS-208ENST00000474319 IP6K1Q92551 441 aa12.85□□□□□ -0.35
LSS-208ENST00000474319 KDM4AO75164 1064 aa12.85□□□□□ -0.35
LSS-208ENST00000474319 HSPA4P34932 840 aa12.85□□□□□ -0.35
LSS-208ENST00000474319 LIMCH1Q9UPQ0 1083 aa12.85□□□□□ -0.35
LSS-208ENST00000474319 SLIT1O75093 1534 aa12.85□□□□□ -0.35
LSS-208ENST00000474319 CUL4AQ13619 759 aa12.85□□□□□ -0.35
LSS-208ENST00000474319 BRINP3Q76B58 766 aa12.85□□□□□ -0.35
LSS-208ENST00000474319 OSBPL3Q9H4L5 887 aa12.85□□□□□ -0.35
LSS-208ENST00000474319 SGSM2O43147 1006 aa12.84□□□□□ -0.35
LSS-208ENST00000474319 FGD1P98174 961 aa12.84□□□□□ -0.35
LSS-208ENST00000474319 CLASRPQ8N2M8 674 aaKnown RBP12.84□□□□□ -0.35
LSS-208ENST00000474319 TLR7Q9NYK1 1049 aaKnown RBP12.84□□□□□ -0.35
LSS-208ENST00000474319 NPHP3Q7Z494 1330 aa12.84□□□□□ -0.35
LSS-208ENST00000474319 SBNO1A3KN83 1393 aa12.84□□□□□ -0.35
LSS-208ENST00000474319 PHF14O94880 888 aa12.84□□□□□ -0.35
LSS-208ENST00000474319 MAP3K2Q9Y2U5 619 aa12.84□□□□□ -0.35
LSS-208ENST00000474319 KIAA0232Q92628 1395 aa12.84□□□□□ -0.35
LSS-208ENST00000474319 DLG5Q8TDM6 1919 aa12.84□□□□□ -0.35
LSS-208ENST00000474319 CCDC183Q5T5S1 534 aa12.83□□□□□ -0.35
LSS-208ENST00000474319 LARP1BQ659C4 914 aaKnown RBP12.83□□□□□ -0.35
LSS-208ENST00000474319 LUZP1Q86V48 1076 aa12.83□□□□□ -0.35
LSS-208ENST00000474319 PI4K2BQ8TCG2 481 aa12.83□□□□□ -0.35
LSS-208ENST00000474319 DNAAF4Q8WXU2 420 aa12.83□□□□□ -0.35
LSS-208ENST00000474319 ZNF592Q92610 1267 aa12.83□□□□□ -0.35
LSS-208ENST00000474319 KIF1BPQ96EK5 621 aa12.83□□□□□ -0.35
LSS-208ENST00000474319 BTBD11A6QL63 1104 aa12.83□□□□□ -0.36
LSS-208ENST00000474319 PTCD1O75127 700 aaKnown RBP12.83□□□□□ -0.36
LSS-208ENST00000474319 RAB11FIP3O75154 756 aa12.83□□□□□ -0.36
LSS-208ENST00000474319 F13A1P00488 732 aa12.83□□□□□ -0.36
LSS-208ENST00000474319 NOLC1Q14978 699 aaKnown RBP eCLIP12.83□□□□□ -0.363e-7■■□□□ 11.8
LSS-208ENST00000474319 ERCC4Q92889 916 aaPredicted RBP12.83□□□□□ -0.36
LSS-208ENST00000474319 ADGRL3Q9HAR2 1447 aa12.83□□□□□ -0.36
LSS-208ENST00000474319 ZNF500O60304 480 aaPredicted RBP12.83□□□□□ -0.36
LSS-208ENST00000474319 HSP90B1P14625 803 aaKnown RBP12.83□□□□□ -0.36
LSS-208ENST00000474319 FSD1Q9BTV5 496 aa12.83□□□□□ -0.36
LSS-208ENST00000474319 KIF20BQ96Q89 1820 aa12.83□□□□□ -0.36
LSS-208ENST00000474319 SLFNL1Q499Z3 407 aa12.82□□□□□ -0.36
LSS-208ENST00000474319 PLEKHO1Q53GL0 409 aaPredicted RBP12.82□□□□□ -0.36
LSS-208ENST00000474319 CDC37L1Q7L3B6 337 aa12.82□□□□□ -0.36
LSS-208ENST00000474319 AP5Z1O43299 807 aa12.82□□□□□ -0.36
LSS-208ENST00000474319 ME3Q16798 604 aa12.82□□□□□ -0.36
LSS-208ENST00000474319 SASS6Q6UVJ0 657 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms