RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 MAP7D1Q3KQU3 841 aa11.18□□□□□ -0.62
SCAF4-205ENST00000472318 EFCAB2Q5VUJ9 269 aa11.18□□□□□ -0.62
SCAF4-205ENST00000472318 RIPOR1Q6ZS17 1223 aa11.18□□□□□ -0.62
SCAF4-205ENST00000472318 SIRT1Q96EB6 747 aa11.18□□□□□ -0.62
SCAF4-205ENST00000472318 ETNK1Q9HBU6 452 aa11.18□□□□□ -0.62
SCAF4-205ENST00000472318 TIMMDC1Q9NPL8 285 aa11.18□□□□□ -0.62
SCAF4-205ENST00000472318 CNTLNQ9NXG0 1405 aa11.18□□□□□ -0.62
SCAF4-205ENST00000472318 REREQ9P2R6 1566 aa11.17□□□□□ -0.62
SCAF4-205ENST00000472318 H7C1W4 665 aa11.17□□□□□ -0.62
SCAF4-205ENST00000472318 SRSF11Q05519 484 aaKnown RBP11.17□□□□□ -0.62
SCAF4-205ENST00000472318 PLPP7Q8NBV4 271 aa11.17□□□□□ -0.62
SCAF4-205ENST00000472318 ZSCAN10Q96SZ4 725 aaPredicted RBP11.17□□□□□ -0.62
SCAF4-205ENST00000472318 ZNF518AQ6AHZ1 1483 aa11.17□□□□□ -0.62
SCAF4-205ENST00000472318 GAS2L1Q99501 681 aaPredicted RBP11.16□□□□□ -0.62
SCAF4-205ENST00000472318 KDM5CP41229 1560 aa11.16□□□□□ -0.62
SCAF4-205ENST00000472318 PRXQ9BXM0 1461 aa11.15□□□□□ -0.62
SCAF4-205ENST00000472318 ADAMTS2O95450 1211 aa11.15□□□□□ -0.62
SCAF4-205ENST00000472318 STAU1O95793 577 aaKnown RBP11.15□□□□□ -0.62
SCAF4-205ENST00000472318 SVOPQ8N4V2 548 aa11.15□□□□□ -0.62
SCAF4-205ENST00000472318 WHAMMQ8TF30 809 aa11.15□□□□□ -0.62
SCAF4-205ENST00000472318 POM121Q96HA1 1249 aa11.15□□□□□ -0.62
SCAF4-205ENST00000472318 ABCA6Q8N139 1617 aa11.14□□□□□ -0.63
SCAF4-205ENST00000472318 F11P03951 625 aa11.14□□□□□ -0.63
SCAF4-205ENST00000472318 SCNN1DP51172 638 aa11.14□□□□□ -0.63
SCAF4-205ENST00000472318 FOXR1Q6PIV2 292 aa11.14□□□□□ -0.63
SCAF4-205ENST00000472318 MBIPQ9NS73 344 aa11.14□□□□□ -0.63
SCAF4-205ENST00000472318 SAMD9Q5K651 1589 aa11.14□□□□□ -0.63
SCAF4-205ENST00000472318 SETD1AO15047 1707 aaKnown RBP11.14□□□□□ -0.63
SCAF4-205ENST00000472318 CEP170BQ9Y4F5 1589 aaPredicted RBP11.13□□□□□ -0.63
SCAF4-205ENST00000472318 A0A1B0GTH6 734 aa11.13□□□□□ -0.63
SCAF4-205ENST00000472318 GPR25O00155 361 aa11.13□□□□□ -0.63
SCAF4-205ENST00000472318 MLH3Q9UHC1 1453 aa11.12□□□□□ -0.63
SCAF4-205ENST00000472318 PIK3CDO00329 1044 aa11.12□□□□□ -0.63
SCAF4-205ENST00000472318 FLIIQ13045 1269 aa11.12□□□□□ -0.63
SCAF4-205ENST00000472318 C4orf17Q53FE4 359 aa11.12□□□□□ -0.63
SCAF4-205ENST00000472318 GNASQ5JWF2 1037 aa11.12□□□□□ -0.63
SCAF4-205ENST00000472318 TMEM214Q6NUQ4 689 aaKnown RBP11.12□□□□□ -0.63
SCAF4-205ENST00000472318 GTPBP3Q969Y2 492 aaKnown RBP11.12□□□□□ -0.63
SCAF4-205ENST00000472318 ALG2Q9H553 416 aa11.12□□□□□ -0.63
SCAF4-205ENST00000472318 ADAMTS8Q9UP79 889 aa11.12□□□□□ -0.63
SCAF4-205ENST00000472318 MYO3AQ8NEV4 1616 aa11.12□□□□□ -0.63
SCAF4-205ENST00000472318 ARHGEF15O94989 841 aa11.11□□□□□ -0.63
SCAF4-205ENST00000472318 THBS1P07996 1170 aa11.11□□□□□ -0.63
SCAF4-205ENST00000472318 GTF2E1P29083 439 aaPredicted RBP11.11□□□□□ -0.63
SCAF4-205ENST00000472318 TLR1Q15399 786 aa11.11□□□□□ -0.63
SCAF4-205ENST00000472318 PPARGC1BQ86YN6 1023 aaKnown RBP11.11□□□□□ -0.63
SCAF4-205ENST00000472318 RHBDD1Q8TEB9 315 aa11.11□□□□□ -0.63
SCAF4-205ENST00000472318 NUCKS1Q9H1E3 243 aaKnown RBP11.11□□□□□ -0.63
SCAF4-205ENST00000472318 VWDEQ8N2E2 1590 aa11.11□□□□□ -0.63
SCAF4-205ENST00000472318 ZNF142P52746 1687 aaPredicted RBP11.11□□□□□ -0.63
SCAF4-205ENST00000472318 INHAP05111 366 aa11.1□□□□□ -0.63
SCAF4-205ENST00000472318 PHKA2P46019 1235 aa11.1□□□□□ -0.63
SCAF4-205ENST00000472318 GDF10P55107 478 aa11.1□□□□□ -0.63
SCAF4-205ENST00000472318 WWC1Q8IX03 1113 aa11.1□□□□□ -0.63
SCAF4-205ENST00000472318 TRERF1Q96PN7 1200 aa11.1□□□□□ -0.63
SCAF4-205ENST00000472318 NEURL4Q96JN8 1562 aa11.1□□□□□ -0.63
SCAF4-205ENST00000472318 GSK3AP49840 483 aa11.09□□□□□ -0.63
SCAF4-205ENST00000472318 KCNMA1Q12791 1236 aa11.09□□□□□ -0.63
SCAF4-205ENST00000472318 NFATC2IPQ8NCF5 419 aa11.09□□□□□ -0.63
SCAF4-205ENST00000472318 CDK13Q14004 1512 aaKnown RBP11.09□□□□□ -0.63
SCAF4-205ENST00000472318 RAD21O60216 631 aa11.08□□□□□ -0.64
SCAF4-205ENST00000472318 LYPD4Q6UWN0 246 aa11.08□□□□□ -0.64
SCAF4-205ENST00000472318 GPAMQ9HCL2 828 aa11.08□□□□□ -0.64
SCAF4-205ENST00000472318 UBTFP17480 764 aaKnown RBP11.07□□□□□ -0.64
SCAF4-205ENST00000472318 LBRQ14739 615 aaKnown RBP11.07□□□□□ -0.64
SCAF4-205ENST00000472318 LRRC7Q96NW7 1537 aa11.07□□□□□ -0.64
SCAF4-205ENST00000472318 MROH2AA6NES4 1674 aa11.07□□□□□ -0.64
SCAF4-205ENST00000472318 A2ML1A8K2U0 1454 aa11.06□□□□□ -0.64
SCAF4-205ENST00000472318 RNF225M0QZC1 329 aaPredicted RBP11.06□□□□□ -0.64
SCAF4-205ENST00000472318 UBAP2LQ14157 1087 aaKnown RBP11.06□□□□□ -0.64
SCAF4-205ENST00000472318 TMEM229AB2RXF0 380 aa11.05□□□□□ -0.64
SCAF4-205ENST00000472318 CELA2BP08218 269 aaPredicted RBP11.05□□□□□ -0.64
SCAF4-205ENST00000472318 PCDHGA11Q9Y5H2 935 aa11.05□□□□□ -0.64
SCAF4-205ENST00000472318 DNMT1P26358 1616 aaKnown RBP11.05□□□□□ -0.64
SCAF4-205ENST00000472318 ARHGAP5Q13017 1502 aa11.04□□□□□ -0.64
SCAF4-205ENST00000472318 LZTS3O60299 673 aaPredicted RBP11.04□□□□□ -0.64
SCAF4-205ENST00000472318 SKIP12755 728 aa11.04□□□□□ -0.64
SCAF4-205ENST00000472318 MSX1P28360 303 aa11.04□□□□□ -0.64
SCAF4-205ENST00000472318 SMTNP53814 917 aa11.04□□□□□ -0.64
SCAF4-205ENST00000472318 EML3Q32P44 896 aa11.04□□□□□ -0.64
SCAF4-205ENST00000472318 SLC4A9Q96Q91 983 aa11.04□□□□□ -0.64
SCAF4-205ENST00000472318 CFHR5Q9BXR6 569 aa11.04□□□□□ -0.64
SCAF4-205ENST00000472318 POM121CA8CG34 1229 aa11.03□□□□□ -0.64
SCAF4-205ENST00000472318 MX2P20592 715 aa11.03□□□□□ -0.64
SCAF4-205ENST00000472318 MAP3K10Q02779 954 aa11.03□□□□□ -0.64
SCAF4-205ENST00000472318 MTFR1Q15390 333 aa11.03□□□□□ -0.64
SCAF4-205ENST00000472318 ZNF295-AS1Q8N0V1 137 aa11.03□□□□□ -0.64
SCAF4-205ENST00000472318 ADAMTS19Q8TE59 1207 aa11.03□□□□□ -0.64
SCAF4-205ENST00000472318 CRISPLD1Q9H336 500 aa11.03□□□□□ -0.64
SCAF4-205ENST00000472318 RUBCNLQ9H714 662 aa11.03□□□□□ -0.64
SCAF4-205ENST00000472318 CSB-PGBD3P0DP91 1061 aa11.02□□□□□ -0.65
SCAF4-205ENST00000472318 PLA2G4AP47712 749 aa11.02□□□□□ -0.65
SCAF4-205ENST00000472318 NCOA4Q13772 614 aa11.02□□□□□ -0.65
SCAF4-205ENST00000472318 NPM2Q86SE8 214 aaKnown RBP11.02□□□□□ -0.65
SCAF4-205ENST00000472318 ANKLE2Q86XL3 938 aa11.02□□□□□ -0.65
SCAF4-205ENST00000472318 PGBD3Q8N328 593 aa11.02□□□□□ -0.65
SCAF4-205ENST00000472318 IQSEC3Q9UPP2 1182 aaPredicted RBP11.02□□□□□ -0.65
SCAF4-205ENST00000472318 NOD1Q9Y239 953 aa11.02□□□□□ -0.65
SCAF4-205ENST00000472318 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.02□□□□□ -0.65
SCAF4-205ENST00000472318 NPHP4O75161 1426 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms