RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 TMOD3Q9NYL9 352 aa12.56□□□□□ -0.4
CLK2-204ENST00000471047 PXDNLA1KZ92 1463 aa12.56□□□□□ -0.4
CLK2-204ENST00000471047 C4BP0C0L5 1744 aa12.55□□□□□ -0.4
CLK2-204ENST00000471047 WDR90Q96KV7 1748 aa12.55□□□□□ -0.4
CLK2-204ENST00000471047 A0A0G2JLW4 131 aa12.55□□□□□ -0.4
CLK2-204ENST00000471047 HMGB2P26583 209 aaKnown RBP12.55□□□□□ -0.4
CLK2-204ENST00000471047 ARHGAP27Q6ZUM4 889 aa12.55□□□□□ -0.4
CLK2-204ENST00000471047 LINC00116Q8NCU8 138 aa12.55□□□□□ -0.4
CLK2-204ENST00000471047 PANK1Q8TE04 598 aa12.55□□□□□ -0.4
CLK2-204ENST00000471047 STK31Q9BXU1 1019 aa12.55□□□□□ -0.4
CLK2-204ENST00000471047 PPP4R2Q9NY27 417 aa12.55□□□□□ -0.4
CLK2-204ENST00000471047 PTPRCP08575 1304 aa12.55□□□□□ -0.4
CLK2-204ENST00000471047 PRAMEF22A3QJZ6 481 aa12.54□□□□□ -0.4
CLK2-204ENST00000471047 MMP10P09238 476 aa12.54□□□□□ -0.4
CLK2-204ENST00000471047 SNRPA1P09661 255 aaKnown RBP12.54□□□□□ -0.4
CLK2-204ENST00000471047 ABCC4O15439 1325 aa12.54□□□□□ -0.4
CLK2-204ENST00000471047 SSFA2P28290 1259 aa12.53□□□□□ -0.4
CLK2-204ENST00000471047 C9orf131Q5VYM1 1079 aa12.53□□□□□ -0.4
CLK2-204ENST00000471047 G2E3Q7L622 706 aa12.53□□□□□ -0.4
CLK2-204ENST00000471047 CLUAP1Q96AJ1 413 aa12.53□□□□□ -0.4
CLK2-204ENST00000471047 API5Q9BZZ5 524 aaKnown RBP12.53□□□□□ -0.4
CLK2-204ENST00000471047 ATG3Q9NT62 314 aa12.53□□□□□ -0.4
CLK2-204ENST00000471047 ASAP1Q9ULH1 1129 aa12.53□□□□□ -0.4
CLK2-204ENST00000471047 COG6Q9Y2V7 657 aa12.53□□□□□ -0.4
CLK2-204ENST00000471047 EIF2S2P20042 333 aaKnown RBP12.52□□□□□ -0.41
CLK2-204ENST00000471047 AAMPQ13685 434 aa12.52□□□□□ -0.41
CLK2-204ENST00000471047 MVPQ14764 893 aaKnown RBP12.52□□□□□ -0.41
CLK2-204ENST00000471047 PDIA6Q15084 440 aa12.52□□□□□ -0.41
CLK2-204ENST00000471047 FTSJ3Q8IY81 847 aaKnown RBP12.52□□□□□ -0.41
CLK2-204ENST00000471047 VSIG10Q8N0Z9 540 aa12.52□□□□□ -0.41
CLK2-204ENST00000471047 NECTIN2Q92692 538 aa12.52□□□□□ -0.41
CLK2-204ENST00000471047 SMARCC1Q92922 1105 aaPredicted RBP12.52□□□□□ -0.41
CLK2-204ENST00000471047 CHPF2Q9P2E5 772 aa12.52□□□□□ -0.41
CLK2-204ENST00000471047 DBF4Q9UBU7 674 aaPredicted RBP12.52□□□□□ -0.41
CLK2-204ENST00000471047 USP16Q9Y5T5 823 aa12.52□□□□□ -0.41
CLK2-204ENST00000471047 TAF1LQ8IZX4 1826 aa12.52□□□□□ -0.41
CLK2-204ENST00000471047 N4BP2Q86UW6 1770 aaPredicted RBP12.51□□□□□ -0.41
CLK2-204ENST00000471047 UBR3Q6ZT12 1888 aa12.51□□□□□ -0.41
CLK2-204ENST00000471047 GNPATO15228 680 aa12.51□□□□□ -0.41
CLK2-204ENST00000471047 DPEP1P16444 411 aa12.51□□□□□ -0.41
CLK2-204ENST00000471047 FSTL1Q12841 308 aa12.51□□□□□ -0.41
CLK2-204ENST00000471047 FLIIQ13045 1269 aa12.51□□□□□ -0.41
CLK2-204ENST00000471047 ITPK1Q13572 414 aa12.51□□□□□ -0.41
CLK2-204ENST00000471047 C16orf71Q8IYS4 520 aaPredicted RBP12.51□□□□□ -0.41
CLK2-204ENST00000471047 TMEM57Q8N5G2 664 aa12.51□□□□□ -0.41
CLK2-204ENST00000471047 DDX21Q9NR30 783 aaKnown RBP eCLIP12.51□□□□□ -0.41
CLK2-204ENST00000471047 LOC102724428A0A0B4J2F2 783 aa12.5□□□□□ -0.41
CLK2-204ENST00000471047 PTCD1O75127 700 aaKnown RBP12.5□□□□□ -0.41
CLK2-204ENST00000471047 SIK1P57059 783 aa12.5□□□□□ -0.41
CLK2-204ENST00000471047 TGFB2P61812 414 aa12.5□□□□□ -0.41
CLK2-204ENST00000471047 PHAXQ9H814 394 aaKnown RBP12.5□□□□□ -0.41
CLK2-204ENST00000471047 ERBB4Q15303 1308 aa12.5□□□□□ -0.41
CLK2-204ENST00000471047 C10orf71Q711Q0 1435 aa12.5□□□□□ -0.41
CLK2-204ENST00000471047 ZNF831Q5JPB2 1677 aa12.5□□□□□ -0.41
CLK2-204ENST00000471047 KIAA1551Q9HCM1 1747 aa12.5□□□□□ -0.41
CLK2-204ENST00000471047 TJP1Q07157 1748 aa12.49□□□□□ -0.41
CLK2-204ENST00000471047 HSPA1AP0DMV8 641 aaKnown RBP12.49□□□□□ -0.41
CLK2-204ENST00000471047 HSPA1BP0DMV9 641 aaKnown RBP12.49□□□□□ -0.41
CLK2-204ENST00000471047 INTS3Q68E01 1043 aaKnown RBP12.49□□□□□ -0.41
CLK2-204ENST00000471047 LRP10Q7Z4F1 713 aa12.49□□□□□ -0.41
CLK2-204ENST00000471047 RRAGCQ9HB90 399 aa12.49□□□□□ -0.41
CLK2-204ENST00000471047 HYPKQ9NX55 129 aa12.49□□□□□ -0.41
CLK2-204ENST00000471047 DDX19BQ9UMR2 479 aa12.49□□□□□ -0.41
CLK2-204ENST00000471047 PROSER3Q2NL68 480 aa12.48□□□□□ -0.41
CLK2-204ENST00000471047 SLC4A9Q96Q91 983 aa12.48□□□□□ -0.41
CLK2-204ENST00000471047 TEX13AQ9BXU3 409 aaPredicted RBP12.48□□□□□ -0.41
CLK2-204ENST00000471047 ANXA1P04083 346 aa12.47□□□□□ -0.41
CLK2-204ENST00000471047 FKBP5Q13451 457 aaPredicted RBP12.47□□□□□ -0.41
CLK2-204ENST00000471047 ITPRIPQ8IWB1 547 aa12.47□□□□□ -0.41
CLK2-204ENST00000471047 ZBTB7BO15156 539 aaPredicted RBP12.46□□□□□ -0.41
CLK2-204ENST00000471047 KCNA3P22001 575 aa12.46□□□□□ -0.41
CLK2-204ENST00000471047 ATP6V1AP38606 617 aa12.46□□□□□ -0.41
CLK2-204ENST00000471047 B4GALNT3Q6L9W6 998 aa12.46□□□□□ -0.41
CLK2-204ENST00000471047 ZBTB40Q9NUA8 1239 aa12.46□□□□□ -0.41
CLK2-204ENST00000471047 RNF181Q9P0P0 153 aa12.46□□□□□ -0.41
CLK2-204ENST00000471047 KDM2BQ8NHM5 1336 aa12.45□□□□□ -0.42
CLK2-204ENST00000471047 NBPF26B4DH59 902 aa12.45□□□□□ -0.42
CLK2-204ENST00000471047 F6X3S4 739 aa12.45□□□□□ -0.42
CLK2-204ENST00000471047 CCT4P50991 539 aaKnown RBP12.45□□□□□ -0.42
CLK2-204ENST00000471047 NBPF10Q6P3W6 841 aaKnown RBP12.45□□□□□ -0.42
CLK2-204ENST00000471047 DNAJC10Q8IXB1 793 aa12.45□□□□□ -0.42
CLK2-204ENST00000471047 NBPF15Q8N660 670 aa12.45□□□□□ -0.42
CLK2-204ENST00000471047 SMC1BQ8NDV3 1235 aa12.45□□□□□ -0.42
CLK2-204ENST00000471047 CCDC136Q96JN2 1154 aa12.45□□□□□ -0.42
CLK2-204ENST00000471047 RBM42Q9BTD8 480 aaKnown RBP12.45□□□□□ -0.42
CLK2-204ENST00000471047 CCDC87Q9NVE4 849 aa12.45□□□□□ -0.42
CLK2-204ENST00000471047 KIF13BQ9NQT8 1826 aa12.44□□□□□ -0.42
CLK2-204ENST00000471047 PI4KAP2A4QPH2 592 aa12.44□□□□□ -0.42
CLK2-204ENST00000471047 A1BGP04217 495 aa12.44□□□□□ -0.42
CLK2-204ENST00000471047 CYP19A1P11511 503 aaPredicted RBP12.44□□□□□ -0.42
CLK2-204ENST00000471047 KSR2Q6VAB6 950 aa12.44□□□□□ -0.42
CLK2-204ENST00000471047 PI4KAP1Q8N8J0 262 aa12.44□□□□□ -0.42
CLK2-204ENST00000471047 CHMP4BQ9H444 224 aaKnown RBP12.44□□□□□ -0.42
CLK2-204ENST00000471047 COL5A3P25940 1745 aaPredicted RBP12.43□□□□□ -0.42
CLK2-204ENST00000471047 STARD3NLO95772 234 aa12.43□□□□□ -0.42
CLK2-204ENST00000471047 GYS1P13807 737 aa12.43□□□□□ -0.42
CLK2-204ENST00000471047 MYL6BP14649 208 aa12.43□□□□□ -0.42
CLK2-204ENST00000471047 TRAPPC3LQ5T215 181 aa12.43□□□□□ -0.42
CLK2-204ENST00000471047 NLGN1Q8N2Q7 840 aa12.43□□□□□ -0.42
CLK2-204ENST00000471047 DNAAF4Q8WXU2 420 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms