RNA–Protein interactions for RNA: ENST00000466707.1

ABCA2-213, Transcript of ATP binding cassette subfamily A member 2, human

TSL 2

Gene ABCA2, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-213	ENST00000466707	ZNF219	Q9P2Y4	722 aa	Predicted RBP	33.8	■■■■□ 3
ABCA2-213	ENST00000466707	DICER1	Q9UPY3	1922 aa	Known RBP	33.79	■■■■□ 3
ABCA2-213	ENST00000466707	MIS18A	Q9NYP9	233 aa		33.79	■■■■□ 3
ABCA2-213	ENST00000466707	PDZRN3	Q9UPQ7	1066 aa		33.79	■■■■□ 3
ABCA2-213	ENST00000466707	C21orf2	O43822	256 aa		33.78	■■■■□ 3
ABCA2-213	ENST00000466707	TAF7	Q15545	349 aa	Predicted RBP	33.78	■■■■□ 3
ABCA2-213	ENST00000466707	NPHP1	O15259	732 aa		33.76	■■■□□ 2.99
ABCA2-213	ENST00000466707	ST5	P78524	1137 aa		33.76	■■■□□ 2.99
ABCA2-213	ENST00000466707	PLEKHF1	Q96S99	279 aa		33.76	■■■□□ 2.99
ABCA2-213	ENST00000466707	DNAJC5G	Q8N7S2	189 aa		33.75	■■■□□ 2.99
ABCA2-213	ENST00000466707	GLTPD2	A6NH11	291 aa		33.74	■■■□□ 2.99
ABCA2-213	ENST00000466707	CLEC4G	Q6UXB4	293 aa		33.74	■■■□□ 2.99
ABCA2-213	ENST00000466707	SRGN	P10124	158 aa		33.73	■■■□□ 2.99
ABCA2-213	ENST00000466707	FSTL1	Q12841	308 aa		33.73	■■■□□ 2.99
ABCA2-213	ENST00000466707	HTRA3	P83110	453 aa		33.72	■■■□□ 2.99
ABCA2-213	ENST00000466707	STYK1	Q6J9G0	422 aa		33.72	■■■□□ 2.99
ABCA2-213	ENST00000466707	NBPF5P	Q86XG9	351 aa	Predicted RBP	33.72	■■■□□ 2.99
ABCA2-213	ENST00000466707	ZNF652	Q9Y2D9	606 aa		33.72	■■■□□ 2.99
ABCA2-213	ENST00000466707	PRPF40B	Q6NWY9	871 aa	Known RBP	33.71	■■■□□ 2.99
ABCA2-213	ENST00000466707	THUMPD2	Q9BTF0	503 aa	Known RBP	33.71	■■■□□ 2.99
ABCA2-213	ENST00000466707	NFE2L2	Q16236	605 aa		33.69	■■■□□ 2.98
ABCA2-213	ENST00000466707	CNKSR1	Q969H4	720 aa		33.69	■■■□□ 2.98
ABCA2-213	ENST00000466707	MASTL	Q96GX5	879 aa		33.69	■■■□□ 2.98
ABCA2-213	ENST00000466707	NEFM	P07197	916 aa		33.68	■■■□□ 2.98
ABCA2-213	ENST00000466707	HLF	Q16534	295 aa		33.68	■■■□□ 2.98
ABCA2-213	ENST00000466707	NIP7	Q9Y221	180 aa	Known RBP eCLIP	33.68	■■■□□ 2.98
ABCA2-213	ENST00000466707	LTBP3	Q9NS15	1303 aa		33.67	■■■□□ 2.98
ABCA2-213	ENST00000466707	NUP98	P52948	1817 aa		33.67	■■■□□ 2.98
ABCA2-213	ENST00000466707	RGL2	O15211	777 aa		33.65	■■■□□ 2.98
ABCA2-213	ENST00000466707	VEGFA	P15692	232 aa	Predicted RBP	33.65	■■■□□ 2.98
ABCA2-213	ENST00000466707	SMC1B	Q8NDV3	1235 aa		33.65	■■■□□ 2.98
ABCA2-213	ENST00000466707	TAOK3	Q9H2K8	898 aa		33.65	■■■□□ 2.98
ABCA2-213	ENST00000466707	FAM177B	A6PVY3	158 aa		33.64	■■■□□ 2.98
ABCA2-213	ENST00000466707	POTEC	B2RU33	542 aa		33.64	■■■□□ 2.98
ABCA2-213	ENST00000466707	EIF4A1	P60842	406 aa	Known RBP	33.64	■■■□□ 2.98
ABCA2-213	ENST00000466707	ERFE	Q4G0M1	354 aa		33.64	■■■□□ 2.98
ABCA2-213	ENST00000466707	PNISR	Q8TF01	805 aa	Known RBP	33.64	■■■□□ 2.98
ABCA2-213	ENST00000466707	NGEF	Q8N5V2	710 aa		33.62	■■■□□ 2.97
ABCA2-213	ENST00000466707	KLRG2	A4D1S0	409 aa	Predicted RBP	33.61	■■■□□ 2.97
ABCA2-213	ENST00000466707	IFFO2	Q5TF58	517 aa		33.61	■■■□□ 2.97
ABCA2-213	ENST00000466707	C7orf43	Q8WVR3	580 aa		33.61	■■■□□ 2.97
ABCA2-213	ENST00000466707	MAPK8IP3	Q9UPT6	1336 aa		33.6	■■■□□ 2.97
ABCA2-213	ENST00000466707	NPR1	P16066	1061 aa		33.6	■■■□□ 2.97
ABCA2-213	ENST00000466707	TPTE2	Q6XPS3	522 aa		33.6	■■■□□ 2.97
ABCA2-213	ENST00000466707	ABCC12	Q96J65	1359 aa		33.59	■■■□□ 2.97
ABCA2-213	ENST00000466707	SOGA3	Q5TF21	947 aa		33.58	■■■□□ 2.97
ABCA2-213	ENST00000466707	TTLL7	Q6ZT98	887 aa		33.58	■■■□□ 2.97
ABCA2-213	ENST00000466707	RRP7A	Q9Y3A4	280 aa	Known RBP	33.58	■■■□□ 2.97
ABCA2-213	ENST00000466707	DPY19L2	Q6NUT2	758 aa		33.57	■■■□□ 2.96
ABCA2-213	ENST00000466707	KLRG1	Q96E93	195 aa		33.57	■■■□□ 2.96
ABCA2-213	ENST00000466707	OLFM4	Q6UX06	510 aa		33.56	■■■□□ 2.96
ABCA2-213	ENST00000466707	MAP3K15	Q6ZN16	1313 aa		33.55	■■■□□ 2.96
ABCA2-213	ENST00000466707	MYL6B	P14649	208 aa		33.55	■■■□□ 2.96
ABCA2-213	ENST00000466707	CCDC93	Q567U6	631 aa		33.54	■■■□□ 2.96
ABCA2-213	ENST00000466707	PNN	Q9H307	717 aa	Known RBP	33.54	■■■□□ 2.96
ABCA2-213	ENST00000466707	ERVV-1	B6SEH8	477 aa		33.53	■■■□□ 2.96
ABCA2-213	ENST00000466707	NUTM1	Q86Y26	1132 aa		33.53	■■■□□ 2.96
ABCA2-213	ENST00000466707	DDN	O94850	711 aa	Predicted RBP	33.52	■■■□□ 2.96
ABCA2-213	ENST00000466707	UBN2	Q6ZU65	1347 aa		33.52	■■■□□ 2.96
ABCA2-213	ENST00000466707	RALBP1	Q15311	655 aa		33.51	■■■□□ 2.95
ABCA2-213	ENST00000466707	KIF6	Q6ZMV9	814 aa		33.51	■■■□□ 2.95
ABCA2-213	ENST00000466707	ZBTB3	Q9H5J0	574 aa		33.51	■■■□□ 2.95
ABCA2-213	ENST00000466707	TSPYL4	Q9UJ04	414 aa		33.5	■■■□□ 2.95
ABCA2-213	ENST00000466707	GPT	P24298	496 aa		33.49	■■■□□ 2.95
ABCA2-213	ENST00000466707	GTF2E1	P29083	439 aa	Predicted RBP	33.49	■■■□□ 2.95
ABCA2-213	ENST00000466707	JMY	Q8N9B5	988 aa		33.49	■■■□□ 2.95
ABCA2-213	ENST00000466707	SNED1	Q8TER0	1413 aa		33.49	■■■□□ 2.95
ABCA2-213	ENST00000466707	RIPK4	P57078	832 aa		33.48	■■■□□ 2.95
ABCA2-213	ENST00000466707	FKBP4	Q02790	459 aa	Known RBP eCLIP	33.48	■■■□□ 2.95
ABCA2-213	ENST00000466707	NYX	Q9GZU5	481 aa		33.48	■■■□□ 2.95
ABCA2-213	ENST00000466707	ZNF277	Q9NRM2	450 aa	Predicted RBP	33.48	■■■□□ 2.95
ABCA2-213	ENST00000466707	POTEI	P0CG38	1075 aa		33.47	■■■□□ 2.95
ABCA2-213	ENST00000466707	POTEJ	P0CG39	1038 aa		33.47	■■■□□ 2.95
ABCA2-213	ENST00000466707	CRY2	Q49AN0	593 aa		33.47	■■■□□ 2.95
ABCA2-213	ENST00000466707	IBTK	Q9P2D0	1353 aa	Predicted RBP	33.47	■■■□□ 2.95
ABCA2-213	ENST00000466707	LRP10	Q7Z4F1	713 aa		33.46	■■■□□ 2.95
ABCA2-213	ENST00000466707	ERBB4	Q15303	1308 aa		33.46	■■■□□ 2.95
ABCA2-213	ENST00000466707	RIC1	Q4ADV7	1423 aa		33.45	■■■□□ 2.95
ABCA2-213	ENST00000466707	SCN4A	P35499	1836 aa		33.45	■■■□□ 2.95
ABCA2-213	ENST00000466707	TMPO	P42166	694 aa	Known RBP	33.45	■■■□□ 2.95
ABCA2-213	ENST00000466707	ALDH1B1	P30837	517 aa		33.44	■■■□□ 2.94
ABCA2-213	ENST00000466707	SUSD4	Q5VX71	490 aa		33.44	■■■□□ 2.94
ABCA2-213	ENST00000466707	ZNF541	Q9H0D2	1346 aa		33.44	■■■□□ 2.94
ABCA2-213	ENST00000466707	DDX10	Q13206	875 aa	Known RBP	33.43	■■■□□ 2.94
ABCA2-213	ENST00000466707	PDIA6	Q15084	440 aa		33.43	■■■□□ 2.94
ABCA2-213	ENST00000466707	ZNF34	Q8IZ26	560 aa		33.43	■■■□□ 2.94
ABCA2-213	ENST00000466707	PROSER3	Q2NL68	480 aa		33.42	■■■□□ 2.94
ABCA2-213	ENST00000466707	GIGYF2	Q6Y7W6	1299 aa	Known RBP	33.42	■■■□□ 2.94
ABCA2-213	ENST00000466707	RTKN2	Q8IZC4	609 aa		33.42	■■■□□ 2.94
ABCA2-213	ENST00000466707	PCNT	O95613	3336 aa		33.42	■■■□□ 2.94
ABCA2-213	ENST00000466707	ANKRD36C	Q5JPF3	1778 aa		33.42	■■■□□ 2.94
ABCA2-213	ENST00000466707	NTSR2	O95665	410 aa		33.41	■■■□□ 2.94
ABCA2-213	ENST00000466707	ANXA1	P04083	346 aa		33.41	■■■□□ 2.94
ABCA2-213	ENST00000466707	EIF2S2	P20042	333 aa	Known RBP	33.41	■■■□□ 2.94
ABCA2-213	ENST00000466707	SLC51A	Q86UW1	340 aa		33.41	■■■□□ 2.94
ABCA2-213	ENST00000466707	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.41	■■■□□ 2.94
ABCA2-213	ENST00000466707	CCDC146	Q8IYE0	955 aa		33.4	■■■□□ 2.94
ABCA2-213	ENST00000466707	L3MBTL3	Q96JM7	780 aa	Predicted RBP	33.4	■■■□□ 2.94
ABCA2-213	ENST00000466707	COL4A5	P29400	1685 aa		33.39	■■■□□ 2.94
ABCA2-213	ENST00000466707	CHADL	Q6NUI6	762 aa		33.39	■■■□□ 2.94

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms