RNA–Protein interactions for RNA: ENST00000465559.5

FDPS-205, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-205ENST00000465559 SLFN5Q08AF3 891 aa20.09■□□□□ 0.81
FDPS-205ENST00000465559 NPM2Q86SE8 214 aaKnown RBP20.09■□□□□ 0.81
FDPS-205ENST00000465559 FHDC1Q9C0D6 1143 aaPredicted RBP20.09■□□□□ 0.81
FDPS-205ENST00000465559 DBF4Q9UBU7 674 aaPredicted RBP20.09■□□□□ 0.81
FDPS-205ENST00000465559 MAP3K15Q6ZN16 1313 aa20.08■□□□□ 0.81
FDPS-205ENST00000465559 KIAA1551Q9HCM1 1747 aa20.08■□□□□ 0.81
FDPS-205ENST00000465559 TWISTNBQ3B726 338 aaPredicted RBP20.08■□□□□ 0.81
FDPS-205ENST00000465559 TBC1D9BQ66K14 1250 aa20.08■□□□□ 0.81
FDPS-205ENST00000465559 SYT17Q9BSW7 474 aa20.08■□□□□ 0.81
FDPS-205ENST00000465559 E9PSI1 815 aa20.07■□□□□ 0.8
FDPS-205ENST00000465559 VAMP4O75379 141 aa20.07■□□□□ 0.8
FDPS-205ENST00000465559 EXOSC9Q06265 439 aaKnown RBP20.07■□□□□ 0.8
FDPS-205ENST00000465559 HLFQ16534 295 aa20.07■□□□□ 0.8
FDPS-205ENST00000465559 C10orf71Q711Q0 1435 aa20.06■□□□□ 0.8
FDPS-205ENST00000465559 COPS6Q7L5N1 327 aa20.06■□□□□ 0.8
FDPS-205ENST00000465559 CDCA7LQ96GN5 454 aa20.06■□□□□ 0.8
FDPS-205ENST00000465559 CHMP4AQ9BY43 222 aa20.06■□□□□ 0.8
FDPS-205ENST00000465559 CD2APQ9Y5K6 639 aa20.06■□□□□ 0.8
FDPS-205ENST00000465559 PARP3Q9Y6F1 533 aa20.06■□□□□ 0.8
FDPS-205ENST00000465559 ANKRD36CQ5JPF3 1778 aa20.06■□□□□ 0.8
FDPS-205ENST00000465559 CCDC30Q5VVM6 783 aa20.05■□□□□ 0.8
FDPS-205ENST00000465559 XAGE3Q8WTP9 111 aa20.05■□□□□ 0.8
FDPS-205ENST00000465559 HYPKQ9NX55 129 aa20.05■□□□□ 0.8
FDPS-205ENST00000465559 ATP10DQ9P241 1426 aa20.04■□□□□ 0.8
FDPS-205ENST00000465559 GIGYF2Q6Y7W6 1299 aaKnown RBP20.04■□□□□ 0.8
FDPS-205ENST00000465559 KIF6Q6ZMV9 814 aa20.03■□□□□ 0.8
FDPS-205ENST00000465559 ZNF652Q9Y2D9 606 aa20.03■□□□□ 0.8
FDPS-205ENST00000465559 ARFGEF2Q9Y6D5 1785 aa20.03■□□□□ 0.8
FDPS-205ENST00000465559 ANKRD31Q8N7Z5 1873 aa20.03■□□□□ 0.8
FDPS-205ENST00000465559 SERPINB2P05120 415 aa20.02■□□□□ 0.8
FDPS-205ENST00000465559 CARMIL3Q8ND23 1372 aa20.02■□□□□ 0.8
FDPS-205ENST00000465559 BRCA1P38398 1863 aaKnown RBP20.01■□□□□ 0.79
FDPS-205ENST00000465559 HNRNPUQ00839 825 aaKnown RBP eCLIP20.01■□□□□ 0.793e-6■■■□□ 17.5
FDPS-205ENST00000465559 ZNF34Q8IZ26 560 aa20.01■□□□□ 0.79
FDPS-205ENST00000465559 NLGN2Q8NFZ4 835 aa20.01■□□□□ 0.79
FDPS-205ENST00000465559 SETDB2Q96T68 719 aa20.01■□□□□ 0.79
FDPS-205ENST00000465559 ZBTB3Q9H5J0 574 aa20.01■□□□□ 0.79
FDPS-205ENST00000465559 PHAXQ9H814 394 aaKnown RBP20.01■□□□□ 0.79
FDPS-205ENST00000465559 BICDL1Q6ZP65 573 aa20■□□□□ 0.79
FDPS-205ENST00000465559 N4BP2Q86UW6 1770 aaPredicted RBP20■□□□□ 0.79
FDPS-205ENST00000465559 AIMP1Q12904 312 aaKnown RBP19.99■□□□□ 0.79
FDPS-205ENST00000465559 PLBD2Q8NHP8 589 aa19.99■□□□□ 0.79
FDPS-205ENST00000465559 PXDNLA1KZ92 1463 aa19.99■□□□□ 0.79
FDPS-205ENST00000465559 PRR5LQ6MZQ0 368 aa19.98■□□□□ 0.79
FDPS-205ENST00000465559 ANKRD13DQ6ZTN6 518 aa19.98■□□□□ 0.79
FDPS-205ENST00000465559 NIP7Q9Y221 180 aaKnown RBP eCLIP19.98■□□□□ 0.79
FDPS-205ENST00000465559 UBN2Q6ZU65 1347 aa19.98■□□□□ 0.79
FDPS-205ENST00000465559 IBTKQ9P2D0 1353 aaPredicted RBP19.97■□□□□ 0.79
FDPS-205ENST00000465559 TGFB2P61812 414 aa19.97■□□□□ 0.79
FDPS-205ENST00000465559 G2E3Q7L622 706 aa19.97■□□□□ 0.79
FDPS-205ENST00000465559 STK31Q9BXU1 1019 aa19.97■□□□□ 0.79
FDPS-205ENST00000465559 DLEC1Q9Y238 1755 aa19.97■□□□□ 0.79
FDPS-205ENST00000465559 ZBED9Q6R2W3 1325 aa19.97■□□□□ 0.79
FDPS-205ENST00000465559 TCERG1O14776 1098 aaKnown RBP19.96■□□□□ 0.79
FDPS-205ENST00000465559 SLC4A2P04920 1241 aa19.96■□□□□ 0.79
FDPS-205ENST00000465559 TCIRG1Q13488 830 aa19.96■□□□□ 0.79
FDPS-205ENST00000465559 KCNA3P22001 575 aa19.95■□□□□ 0.78
FDPS-205ENST00000465559 HSP90AB3PQ58FF7 597 aa19.95■□□□□ 0.78
FDPS-205ENST00000465559 KLHL34Q8N239 644 aa19.95■□□□□ 0.78
FDPS-205ENST00000465559 ZNF428Q96B54 188 aa19.94■□□□□ 0.78
FDPS-205ENST00000465559 ISCA1Q9BUE6 129 aa19.94■□□□□ 0.78
FDPS-205ENST00000465559 ADCY9O60503 1353 aa19.94■□□□□ 0.78
FDPS-205ENST00000465559 GOLGB1Q14789 3259 aaKnown RBP19.93■□□□□ 0.78
FDPS-205ENST00000465559 GPTP24298 496 aa19.93■□□□□ 0.78
FDPS-205ENST00000465559 TRIM28Q13263 835 aaKnown RBP19.93■□□□□ 0.78
FDPS-205ENST00000465559 PARP10Q53GL7 1025 aa19.93■□□□□ 0.78
FDPS-205ENST00000465559 SUSD4Q5VX71 490 aa19.93■□□□□ 0.78
FDPS-205ENST00000465559 CNBD1Q8NA66 436 aa19.93■□□□□ 0.78
FDPS-205ENST00000465559 BRIP1Q9BX63 1249 aa19.93■□□□□ 0.78
FDPS-205ENST00000465559 COL11A2P13942 1736 aaPredicted RBP19.93■□□□□ 0.78
FDPS-205ENST00000465559 RIC1Q4ADV7 1423 aa19.93■□□□□ 0.78
FDPS-205ENST00000465559 NTSR2O95665 410 aa19.92■□□□□ 0.78
FDPS-205ENST00000465559 CT47B1P0C2W7 299 aaPredicted RBP19.92■□□□□ 0.78
FDPS-205ENST00000465559 FLIIQ13045 1269 aa19.92■□□□□ 0.78
FDPS-205ENST00000465559 KSR2Q6VAB6 950 aa19.92■□□□□ 0.78
FDPS-205ENST00000465559 TPTE2Q6XPS3 522 aa19.92■□□□□ 0.78
FDPS-205ENST00000465559 NLRP10Q86W26 655 aa19.92■□□□□ 0.78
FDPS-205ENST00000465559 NBPF5PQ86XG9 351 aaPredicted RBP19.92■□□□□ 0.78
FDPS-205ENST00000465559 KLRG2A4D1S0 409 aaPredicted RBP19.91■□□□□ 0.78
FDPS-205ENST00000465559 DPEP1P16444 411 aa19.91■□□□□ 0.78
FDPS-205ENST00000465559 ARFGEF1Q9Y6D6 1849 aa19.9■□□□□ 0.78
FDPS-205ENST00000465559 A0A0G2JLW4 131 aa19.9■□□□□ 0.78
FDPS-205ENST00000465559 PI4KAP2A4QPH2 592 aa19.9■□□□□ 0.78
FDPS-205ENST00000465559 DDX58O95786 925 aaKnown RBP19.9■□□□□ 0.78
FDPS-205ENST00000465559 RIC3Q7Z5B4 369 aa19.9■□□□□ 0.78
FDPS-205ENST00000465559 CCDC24Q8N4L8 307 aa19.9■□□□□ 0.78
FDPS-205ENST00000465559 PI4KAP1Q8N8J0 262 aa19.9■□□□□ 0.78
FDPS-205ENST00000465559 METTL22Q9BUU2 404 aaPredicted RBP19.9■□□□□ 0.78
FDPS-205ENST00000465559 NYXQ9GZU5 481 aa19.9■□□□□ 0.78
FDPS-205ENST00000465559 TNRC6CQ9HCJ0 1690 aaKnown RBP19.9■□□□□ 0.78
FDPS-205ENST00000465559 RNF123Q5XPI4 1314 aa19.89■□□□□ 0.77
FDPS-205ENST00000465559 MRPL50Q8N5N7 158 aaKnown RBP19.89■□□□□ 0.77
FDPS-205ENST00000465559 SSH1Q8WYL5 1049 aa19.89■□□□□ 0.77
FDPS-205ENST00000465559 ABCC12Q96J65 1359 aa19.89■□□□□ 0.77
FDPS-205ENST00000465559 ST5P78524 1137 aa19.88■□□□□ 0.77
FDPS-205ENST00000465559 ALDH1L2Q3SY69 923 aa19.88■□□□□ 0.77
FDPS-205ENST00000465559 SLC10A5Q5PT55 438 aa19.88■□□□□ 0.77
FDPS-205ENST00000465559 PPP1R42Q7Z4L9 355 aa19.88■□□□□ 0.77
FDPS-205ENST00000465559 PDZRN3Q9UPQ7 1066 aa19.88■□□□□ 0.77
FDPS-205ENST00000465559 MAP3K2Q9Y2U5 619 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms