RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 KIF7Q2M1P5 1343 aa14.66□□□□□ -0.06
CBX3-205ENST00000462165 CAMTA2O94983 1202 aa14.65□□□□□ -0.06
CBX3-205ENST00000462165 CNBD1Q8NA66 436 aa14.65□□□□□ -0.06
CBX3-205ENST00000462165 CNKSR1Q969H4 720 aa14.65□□□□□ -0.06
CBX3-205ENST00000462165 SETDB2Q96T68 719 aa14.65□□□□□ -0.06
CBX3-205ENST00000462165 ZNF330Q9Y3S2 320 aaPredicted RBP14.65□□□□□ -0.06
CBX3-205ENST00000462165 DDNO94850 711 aaPredicted RBP14.64□□□□□ -0.07
CBX3-205ENST00000462165 SRGNP10124 158 aa14.64□□□□□ -0.07
CBX3-205ENST00000462165 ST5P78524 1137 aa14.64□□□□□ -0.07
CBX3-205ENST00000462165 SOGA3Q5TF21 947 aa14.64□□□□□ -0.07
CBX3-205ENST00000462165 STYK1Q6J9G0 422 aa14.64□□□□□ -0.07
CBX3-205ENST00000462165 FMNL2Q96PY5 1086 aa14.64□□□□□ -0.07
CBX3-205ENST00000462165 CEMIPQ8WUJ3 1361 aa14.63□□□□□ -0.07
CBX3-205ENST00000462165 A1BGP04217 495 aa14.63□□□□□ -0.07
CBX3-205ENST00000462165 POTEIP0CG38 1075 aa14.63□□□□□ -0.07
CBX3-205ENST00000462165 POTEJP0CG39 1038 aa14.63□□□□□ -0.07
CBX3-205ENST00000462165 CC2D1BQ5T0F9 858 aaKnown RBP14.63□□□□□ -0.07
CBX3-205ENST00000462165 PRPF40BQ6NWY9 871 aaKnown RBP14.63□□□□□ -0.07
CBX3-205ENST00000462165 NPM2Q86SE8 214 aaKnown RBP14.63□□□□□ -0.07
CBX3-205ENST00000462165 MASTLQ96GX5 879 aa14.63□□□□□ -0.07
CBX3-205ENST00000462165 NPHP1O15259 732 aa14.62□□□□□ -0.07
CBX3-205ENST00000462165 MKRN1Q9UHC7 482 aaKnown RBP14.62□□□□□ -0.07
CBX3-205ENST00000462165 IQCA1LA6NCM1 817 aa14.61□□□□□ -0.07
CBX3-205ENST00000462165 U2SURPO15042 1029 aaKnown RBP14.61□□□□□ -0.07
CBX3-205ENST00000462165 DZIP3Q86Y13 1208 aaKnown RBP14.61□□□□□ -0.07
CBX3-205ENST00000462165 L3MBTL3Q96JM7 780 aaPredicted RBP14.61□□□□□ -0.07
CBX3-205ENST00000462165 PASKQ96RG2 1323 aa14.61□□□□□ -0.07
CBX3-205ENST00000462165 CNTNAP1P78357 1384 aa14.6□□□□□ -0.07
CBX3-205ENST00000462165 NPC1L1Q9UHC9 1359 aa14.6□□□□□ -0.07
CBX3-205ENST00000462165 KCNQ3O43525 872 aa14.6□□□□□ -0.07
CBX3-205ENST00000462165 CLEC4GQ6UXB4 293 aa14.6□□□□□ -0.07
CBX3-205ENST00000462165 LDHDQ86WU2 507 aa14.6□□□□□ -0.07
CBX3-205ENST00000462165 C7orf43Q8WVR3 580 aa14.6□□□□□ -0.07
CBX3-205ENST00000462165 U3KPZ7 1027 aaPredicted RBP14.6□□□□□ -0.07
CBX3-205ENST00000462165 BTBD11A6QL63 1104 aa14.59□□□□□ -0.07
CBX3-205ENST00000462165 CCDC93Q567U6 631 aa14.59□□□□□ -0.07
CBX3-205ENST00000462165 TAF1DQ9H5J8 278 aaPredicted RBP14.59□□□□□ -0.07
CBX3-205ENST00000462165 ADAMTSL1Q8N6G6 1762 aa14.59□□□□□ -0.07
CBX3-205ENST00000462165 KLRG2A4D1S0 409 aaPredicted RBP14.58□□□□□ -0.08
CBX3-205ENST00000462165 USP16Q9Y5T5 823 aa14.58□□□□□ -0.08
CBX3-205ENST00000462165 FOXN1O15353 648 aa14.57□□□□□ -0.08
CBX3-205ENST00000462165 NPR1P16066 1061 aa14.57□□□□□ -0.08
CBX3-205ENST00000462165 FKBP4Q02790 459 aaKnown RBP eCLIP14.57□□□□□ -0.08
CBX3-205ENST00000462165 NBPF5PQ86XG9 351 aaPredicted RBP14.57□□□□□ -0.08
CBX3-205ENST00000462165 PHACTR3Q96KR7 559 aa14.57□□□□□ -0.08
CBX3-205ENST00000462165 PRDM10Q9NQV6 1147 aa14.57□□□□□ -0.08
CBX3-205ENST00000462165 ZNF652Q9Y2D9 606 aa14.57□□□□□ -0.08
CBX3-205ENST00000462165 PRAMEF22A3QJZ6 481 aa14.56□□□□□ -0.08
CBX3-205ENST00000462165 TMEM88BA6NKF7 163 aa14.56□□□□□ -0.08
CBX3-205ENST00000462165 RGL2O15211 777 aa14.56□□□□□ -0.08
CBX3-205ENST00000462165 ITGBL1O95965 494 aaPredicted RBP14.56□□□□□ -0.08
CBX3-205ENST00000462165 PIP4K2AP48426 406 aaPredicted RBP14.56□□□□□ -0.08
CBX3-205ENST00000462165 RSPH6AQ9H0K4 717 aa14.56□□□□□ -0.08
CBX3-205ENST00000462165 SNRPA1P09661 255 aaKnown RBP14.55□□□□□ -0.08
CBX3-205ENST00000462165 PRKAR2BP31323 418 aa14.55□□□□□ -0.08
CBX3-205ENST00000462165 TPTE2Q6XPS3 522 aa14.55□□□□□ -0.08
CBX3-205ENST00000462165 RTKN2Q8IZC4 609 aa14.55□□□□□ -0.08
CBX3-205ENST00000462165 ZNF541Q9H0D2 1346 aa14.55□□□□□ -0.08
CBX3-205ENST00000462165 VEGFBP49765 207 aa14.54□□□□□ -0.08
CBX3-205ENST00000462165 CCER1Q8TC90 406 aaPredicted RBP14.54□□□□□ -0.08
CBX3-205ENST00000462165 ZNF277Q9NRM2 450 aaPredicted RBP14.54□□□□□ -0.08
CBX3-205ENST00000462165 HACL1Q9UJ83 578 aa14.54□□□□□ -0.08
CBX3-205ENST00000462165 LAMB4A4D0S4 1761 aa14.54□□□□□ -0.08
CBX3-205ENST00000462165 ALDH1B1P30837 517 aa14.53□□□□□ -0.08
CBX3-205ENST00000462165 EPHX2P34913 555 aa14.53□□□□□ -0.08
CBX3-205ENST00000462165 CTCFP49711 727 aaPredicted RBP14.53□□□□□ -0.08
CBX3-205ENST00000462165 EAPPQ56P03 285 aaPredicted RBP14.53□□□□□ -0.08
CBX3-205ENST00000462165 OLFM4Q6UX06 510 aa14.53□□□□□ -0.08
CBX3-205ENST00000462165 AIDAQ96BJ3 306 aa14.53□□□□□ -0.08
CBX3-205ENST00000462165 NIP7Q9Y221 180 aaKnown RBP eCLIP14.53□□□□□ -0.08
CBX3-205ENST00000462165 NUP98P52948 1817 aa14.52□□□□□ -0.08
CBX3-205ENST00000462165 SNED1Q8TER0 1413 aa14.52□□□□□ -0.08
CBX3-205ENST00000462165 NBPF26B4DH59 902 aa14.52□□□□□ -0.09
CBX3-205ENST00000462165 FZD9O00144 591 aa14.52□□□□□ -0.09
CBX3-205ENST00000462165 KCNA4P22459 653 aa14.52□□□□□ -0.09
CBX3-205ENST00000462165 IARSP41252 1262 aaKnown RBP14.52□□□□□ -0.09
CBX3-205ENST00000462165 CNGB1Q14028 1251 aaPredicted RBP14.52□□□□□ -0.09
CBX3-205ENST00000462165 NBPF10Q6P3W6 841 aaKnown RBP14.52□□□□□ -0.09
CBX3-205ENST00000462165 PNMA8AQ86V59 439 aaPredicted RBP14.52□□□□□ -0.09
CBX3-205ENST00000462165 NBPF15Q8N660 670 aa14.52□□□□□ -0.09
CBX3-205ENST00000462165 WBP1LQ9NX94 342 aa14.52□□□□□ -0.09
CBX3-205ENST00000462165 RNF123Q5XPI4 1314 aa14.51□□□□□ -0.09
CBX3-205ENST00000462165 RASSF10A6NK89 507 aa14.51□□□□□ -0.09
CBX3-205ENST00000462165 MCM10Q7L590 875 aa14.51□□□□□ -0.09
CBX3-205ENST00000462165 SYNE4Q8N205 404 aa14.51□□□□□ -0.09
CBX3-205ENST00000462165 RTF1Q92541 710 aaKnown RBP14.51□□□□□ -0.09
CBX3-205ENST00000462165 CFAP53Q96M91 514 aa14.51□□□□□ -0.09
CBX3-205ENST00000462165 CLEC11AQ9Y240 323 aa14.51□□□□□ -0.09
CBX3-205ENST00000462165 CNTROBQ8N137 903 aa14.5□□□□□ -0.09
CBX3-205ENST00000462165 GPC2Q8N158 579 aa14.5□□□□□ -0.09
CBX3-205ENST00000462165 PSMD1Q99460 953 aa14.5□□□□□ -0.09
CBX3-205ENST00000462165 NUDCQ9Y266 331 aa14.5□□□□□ -0.09
CBX3-205ENST00000462165 FAM177BA6PVY3 158 aa14.49□□□□□ -0.09
CBX3-205ENST00000462165 HTATSF1O43719 755 aaKnown RBP14.49□□□□□ -0.09
CBX3-205ENST00000462165 HLFQ16534 295 aa14.49□□□□□ -0.09
CBX3-205ENST00000462165 DEFB115Q30KQ5 88 aa14.49□□□□□ -0.09
CBX3-205ENST00000462165 LTBP1Q14766 1721 aa14.49□□□□□ -0.09
CBX3-205ENST00000462165 DLG5Q8TDM6 1919 aa14.49□□□□□ -0.09
CBX3-205ENST00000462165 TRPM7Q96QT4 1865 aa14.48□□□□□ -0.09
CBX3-205ENST00000462165 KDM3BQ7LBC6 1761 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms