RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	RNF25	Q96BH1	459 aa	Predicted RBP	13	□□□□□ -0.33
CHEK2-221	ENST00000456369	TSPYL4	Q9UJ04	414 aa		13	□□□□□ -0.33
CHEK2-221	ENST00000456369	EIF5	P55010	431 aa	Known RBP	12.99	□□□□□ -0.33
CHEK2-221	ENST00000456369	CFAP44	Q96MT7	982 aa		12.99	□□□□□ -0.33
CHEK2-221	ENST00000456369	DCBLD2	Q96PD2	775 aa		12.99	□□□□□ -0.33
CHEK2-221	ENST00000456369	MYH14	Q7Z406	1995 aa	Known RBP	12.99	□□□□□ -0.33
CHEK2-221	ENST00000456369	COL24A1	Q17RW2	1714 aa		12.99	□□□□□ -0.33
CHEK2-221	ENST00000456369	USP42	Q9H9J4	1324 aa	Known RBP	12.98	□□□□□ -0.33
CHEK2-221	ENST00000456369	A1BG	P04217	495 aa		12.98	□□□□□ -0.33
CHEK2-221	ENST00000456369	GYS1	P13807	737 aa		12.98	□□□□□ -0.33
CHEK2-221	ENST00000456369	MSL1	Q68DK7	614 aa		12.98	□□□□□ -0.33
CHEK2-221	ENST00000456369	WWC1	Q8IX03	1113 aa		12.98	□□□□□ -0.33
CHEK2-221	ENST00000456369	FAM9B	Q8IZU0	186 aa		12.98	□□□□□ -0.33
CHEK2-221	ENST00000456369	TRPC6	Q9Y210	931 aa		12.98	□□□□□ -0.33
CHEK2-221	ENST00000456369	KDM3B	Q7LBC6	1761 aa		12.98	□□□□□ -0.33
CHEK2-221	ENST00000456369	SENP3-EIF4A1	A0A087X0R7	540 aa		12.97	□□□□□ -0.33
CHEK2-221	ENST00000456369	NBPF26	B4DH59	902 aa		12.97	□□□□□ -0.33
CHEK2-221	ENST00000456369	CANX	P27824	592 aa	Known RBP	12.97	□□□□□ -0.33
CHEK2-221	ENST00000456369	RFC4	P35249	363 aa		12.97	□□□□□ -0.33
CHEK2-221	ENST00000456369	NBPF10	Q6P3W6	841 aa	Known RBP	12.97	□□□□□ -0.33
CHEK2-221	ENST00000456369	NBPF15	Q8N660	670 aa		12.97	□□□□□ -0.33
CHEK2-221	ENST00000456369	ARX	Q96QS3	562 aa		12.97	□□□□□ -0.33
CHEK2-221	ENST00000456369	COL15A1	P39059	1388 aa		12.96	□□□□□ -0.33
CHEK2-221	ENST00000456369	IL6ST	P40189	918 aa	Predicted RBP	12.96	□□□□□ -0.33
CHEK2-221	ENST00000456369	MBIP	Q9NS73	344 aa		12.96	□□□□□ -0.33
CHEK2-221	ENST00000456369	IFT57	Q9NWB7	429 aa		12.96	□□□□□ -0.33
CHEK2-221	ENST00000456369	SRP68	Q9UHB9	627 aa	Known RBP	12.96	□□□□□ -0.33
CHEK2-221	ENST00000456369	GTF3C3	Q9Y5Q9	886 aa		12.96	□□□□□ -0.33
CHEK2-221	ENST00000456369	POLD1	P28340	1107 aa		12.95	□□□□□ -0.34
CHEK2-221	ENST00000456369	CALD1	Q05682	793 aa	Known RBP	12.95	□□□□□ -0.34
CHEK2-221	ENST00000456369	PDAP1	Q13442	181 aa	Known RBP	12.95	□□□□□ -0.34
CHEK2-221	ENST00000456369	KRT24	Q2M2I5	525 aa		12.95	□□□□□ -0.34
CHEK2-221	ENST00000456369	NLGN1	Q8N2Q7	840 aa		12.95	□□□□□ -0.34
CHEK2-221	ENST00000456369	BCL2L12	Q9HB09	334 aa		12.95	□□□□□ -0.34
CHEK2-221	ENST00000456369	NARF	Q9UHQ1	456 aa		12.95	□□□□□ -0.34
CHEK2-221	ENST00000456369	TAOK2	Q9UL54	1235 aa		12.95	□□□□□ -0.34
CHEK2-221	ENST00000456369	LAS1L	Q9Y4W2	734 aa	Known RBP	12.95	□□□□□ -0.34
CHEK2-221	ENST00000456369	ZBED9	Q6R2W3	1325 aa		12.94	□□□□□ -0.34
CHEK2-221	ENST00000456369	PIP4K2A	P48426	406 aa	Predicted RBP	12.94	□□□□□ -0.34
CHEK2-221	ENST00000456369	PSEN1	P49768	467 aa		12.94	□□□□□ -0.34
CHEK2-221	ENST00000456369	USPL1	Q5W0Q7	1092 aa		12.94	□□□□□ -0.34
CHEK2-221	ENST00000456369	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.94	□□□□□ -0.34
CHEK2-221	ENST00000456369	MMP10	P09238	476 aa		12.93	□□□□□ -0.34
CHEK2-221	ENST00000456369	GNAI1	P63096	354 aa		12.93	□□□□□ -0.34
CHEK2-221	ENST00000456369	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.93	□□□□□ -0.34
CHEK2-221	ENST00000456369	LRP10	Q7Z4F1	713 aa		12.93	□□□□□ -0.34
CHEK2-221	ENST00000456369	NGEF	Q8N5V2	710 aa		12.93	□□□□□ -0.34
CHEK2-221	ENST00000456369	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.93	□□□□□ -0.34
CHEK2-221	ENST00000456369	GOLGB1	Q14789	3259 aa	Known RBP	12.93	□□□□□ -0.34
CHEK2-221	ENST00000456369	IL16	Q14005	1332 aa		12.92	□□□□□ -0.34
CHEK2-221	ENST00000456369	UTRN	P46939	3433 aa		12.92	□□□□□ -0.34
CHEK2-221	ENST00000456369		A0A087WZG4	1122 aa		12.92	□□□□□ -0.34
CHEK2-221	ENST00000456369	ZPR1	O75312	459 aa		12.92	□□□□□ -0.34
CHEK2-221	ENST00000456369	C4A	P0C0L4	1744 aa		12.92	□□□□□ -0.34
CHEK2-221	ENST00000456369	TM4SF1	P30408	202 aa		12.92	□□□□□ -0.34
CHEK2-221	ENST00000456369	TIE1	P35590	1138 aa		12.92	□□□□□ -0.34
CHEK2-221	ENST00000456369	PDIA6	Q15084	440 aa		12.92	□□□□□ -0.34
CHEK2-221	ENST00000456369	SYT17	Q9BSW7	474 aa		12.92	□□□□□ -0.34
CHEK2-221	ENST00000456369	TMEM106C	Q9BVX2	250 aa		12.92	□□□□□ -0.34
CHEK2-221	ENST00000456369	ERBB4	Q15303	1308 aa		12.91	□□□□□ -0.34
CHEK2-221	ENST00000456369	ZNF521	Q96K83	1311 aa		12.91	□□□□□ -0.34
CHEK2-221	ENST00000456369	CAMTA2	O94983	1202 aa		12.91	□□□□□ -0.34
CHEK2-221	ENST00000456369	HOXB7	P09629	217 aa		12.91	□□□□□ -0.34
CHEK2-221	ENST00000456369	WDR63	Q8IWG1	891 aa		12.91	□□□□□ -0.34
CHEK2-221	ENST00000456369	TBC1D2B	Q9UPU7	963 aa		12.91	□□□□□ -0.34
CHEK2-221	ENST00000456369	DDR1	Q08345	913 aa		12.9	□□□□□ -0.34
CHEK2-221	ENST00000456369	DZIP3	Q86Y13	1208 aa	Known RBP	12.9	□□□□□ -0.34
CHEK2-221	ENST00000456369	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.9	□□□□□ -0.34
CHEK2-221	ENST00000456369	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.9	□□□□□ -0.34
CHEK2-221	ENST00000456369	SALL2	Q9Y467	1007 aa	Predicted RBP	12.9	□□□□□ -0.34
CHEK2-221	ENST00000456369	POLRMT	O00411	1230 aa	Known RBP	12.89	□□□□□ -0.35
CHEK2-221	ENST00000456369	EIF2S2	P20042	333 aa	Known RBP	12.89	□□□□□ -0.35
CHEK2-221	ENST00000456369	NFIX	Q14938	502 aa		12.89	□□□□□ -0.35
CHEK2-221	ENST00000456369	PROSER3	Q2NL68	480 aa		12.89	□□□□□ -0.35
CHEK2-221	ENST00000456369	DUSP27	Q5VZP5	1158 aa		12.89	□□□□□ -0.35
CHEK2-221	ENST00000456369	C8orf58	Q8NAV2	365 aa		12.89	□□□□□ -0.35
CHEK2-221	ENST00000456369	TSR2	Q969E8	191 aa	Known RBP	12.89	□□□□□ -0.35
CHEK2-221	ENST00000456369	CD2AP	Q9Y5K6	639 aa		12.89	□□□□□ -0.35
CHEK2-221	ENST00000456369	LAMB4	A4D0S4	1761 aa		12.89	□□□□□ -0.35
CHEK2-221	ENST00000456369	TTLL13P	A6NNM8	815 aa		12.88	□□□□□ -0.35
CHEK2-221	ENST00000456369	CLEC4G	Q6UXB4	293 aa		12.88	□□□□□ -0.35
CHEK2-221	ENST00000456369	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.87	□□□□□ -0.35
CHEK2-221	ENST00000456369	MYL6B	P14649	208 aa		12.87	□□□□□ -0.35
CHEK2-221	ENST00000456369	HDGFL1	Q5TGJ6	251 aa		12.87	□□□□□ -0.35
CHEK2-221	ENST00000456369	TBC1D9B	Q66K14	1250 aa		12.87	□□□□□ -0.35
CHEK2-221	ENST00000456369	TSPYL6	Q8N831	410 aa		12.87	□□□□□ -0.35
CHEK2-221	ENST00000456369	NLGN2	Q8NFZ4	835 aa		12.87	□□□□□ -0.35
CHEK2-221	ENST00000456369	ZFP91	Q96JP5	570 aa	Predicted RBP	12.87	□□□□□ -0.35
CHEK2-221	ENST00000456369	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
CHEK2-221	ENST00000456369	PARP3	Q9Y6F1	533 aa		12.87	□□□□□ -0.35
CHEK2-221	ENST00000456369	FANCI	Q9NVI1	1328 aa		12.87	□□□□□ -0.35
CHEK2-221	ENST00000456369	ERVV-1	B6SEH8	477 aa		12.86	□□□□□ -0.35
CHEK2-221	ENST00000456369	ELL2	O00472	640 aa	Predicted RBP	12.86	□□□□□ -0.35
CHEK2-221	ENST00000456369	ATMIN	O43313	823 aa	Predicted RBP	12.86	□□□□□ -0.35
CHEK2-221	ENST00000456369	ANXA1	P04083	346 aa		12.86	□□□□□ -0.35
CHEK2-221	ENST00000456369	HLF	Q16534	295 aa		12.86	□□□□□ -0.35
CHEK2-221	ENST00000456369	TTLL7	Q6ZT98	887 aa		12.86	□□□□□ -0.35
CHEK2-221	ENST00000456369	NPM2	Q86SE8	214 aa	Known RBP	12.86	□□□□□ -0.35
CHEK2-221	ENST00000456369	NECTIN2	Q92692	538 aa		12.86	□□□□□ -0.35
CHEK2-221	ENST00000456369	CHPF2	Q9P2E5	772 aa		12.86	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms