RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 CLTCQ00610 1675 aaKnown RBP6.03□□□□□ -1.44
RBM39-220ENST00000455343 ZNF644Q9H582 1327 aaPredicted RBP6.02□□□□□ -1.45
RBM39-220ENST00000455343 FAM135BQ49AJ0 1406 aa6.02□□□□□ -1.45
RBM39-220ENST00000455343 SLURP2P0DP57 97 aa6.02□□□□□ -1.45
RBM39-220ENST00000455343 CLN3Q13286 438 aa6.02□□□□□ -1.45
RBM39-220ENST00000455343 ZNF385CQ66K41 422 aaPredicted RBP6.02□□□□□ -1.45
RBM39-220ENST00000455343 TBC1D2BQ9UPU7 963 aa6.02□□□□□ -1.45
RBM39-220ENST00000455343 WASHC2CQ9Y4E1 1318 aa6.01□□□□□ -1.45
RBM39-220ENST00000455343 FAM135AQ9P2D6 1515 aa6.01□□□□□ -1.45
RBM39-220ENST00000455343 DEPDC5O75140 1603 aa6.01□□□□□ -1.45
RBM39-220ENST00000455343 SVOPQ8N4V2 548 aa6.01□□□□□ -1.45
RBM39-220ENST00000455343 NLRP3Q96P20 1036 aa6.01□□□□□ -1.45
RBM39-220ENST00000455343 ARHGEF10LQ9HCE6 1279 aa6.01□□□□□ -1.45
RBM39-220ENST00000455343 LRRIQ1Q96JM4 1722 aa6.01□□□□□ -1.45
RBM39-220ENST00000455343 CCNB3Q8WWL7 1395 aa6.01□□□□□ -1.45
RBM39-220ENST00000455343 UGGT1Q9NYU2 1555 aa6.01□□□□□ -1.45
RBM39-220ENST00000455343 CDC42BPAQ5VT25 1732 aa6□□□□□ -1.45
RBM39-220ENST00000455343 SUPT6HQ7KZ85 1726 aaKnown RBP6□□□□□ -1.45
RBM39-220ENST00000455343 KCNMA1Q12791 1236 aa6□□□□□ -1.45
RBM39-220ENST00000455343 GAS6Q14393 721 aa6□□□□□ -1.45
RBM39-220ENST00000455343 SLC27A3Q5K4L6 730 aa6□□□□□ -1.45
RBM39-220ENST00000455343 WHAMMQ8TF30 809 aa6□□□□□ -1.45
RBM39-220ENST00000455343 ZNF837Q96EG3 531 aaPredicted RBP6□□□□□ -1.45
RBM39-220ENST00000455343 CCDC85AQ96PX6 553 aaPredicted RBP6□□□□□ -1.45
RBM39-220ENST00000455343 GRIP2Q9C0E4 1043 aa6□□□□□ -1.45
RBM39-220ENST00000455343 CEP126Q9P2H0 1117 aa6□□□□□ -1.45
RBM39-220ENST00000455343 FYCO1Q9BQS8 1478 aa6□□□□□ -1.45
RBM39-220ENST00000455343 KDM5DQ9BY66 1539 aa5.99□□□□□ -1.45
RBM39-220ENST00000455343 SPATA31C2B4DYI2 1134 aa5.99□□□□□ -1.45
RBM39-220ENST00000455343 ADAMTS2O95450 1211 aa5.99□□□□□ -1.45
RBM39-220ENST00000455343 LTKP29376 864 aa5.99□□□□□ -1.45
RBM39-220ENST00000455343 GSK3AP49840 483 aa5.99□□□□□ -1.45
RBM39-220ENST00000455343 POU4F2Q12837 409 aa5.99□□□□□ -1.45
RBM39-220ENST00000455343 IRF5Q13568 498 aa5.99□□□□□ -1.45
RBM39-220ENST00000455343 TRIM22Q8IYM9 498 aa5.99□□□□□ -1.45
RBM39-220ENST00000455343 GMCL1Q96IK5 515 aa5.99□□□□□ -1.45
RBM39-220ENST00000455343 ADAMTS8Q9UP79 889 aa5.99□□□□□ -1.45
RBM39-220ENST00000455343 DYRK1BQ9Y463 629 aa5.99□□□□□ -1.45
RBM39-220ENST00000455343 ARHGEF15O94989 841 aa5.98□□□□□ -1.45
RBM39-220ENST00000455343 GNRH1P01148 92 aa5.98□□□□□ -1.45
RBM39-220ENST00000455343 SRSF11Q05519 484 aaKnown RBP5.98□□□□□ -1.45
RBM39-220ENST00000455343 NBPF10Q6P3W6 841 aaKnown RBP5.98□□□□□ -1.45
RBM39-220ENST00000455343 NBPF15Q8N660 670 aa5.98□□□□□ -1.45
RBM39-220ENST00000455343 CDCA7Q9BWT1 371 aaPredicted RBP5.98□□□□□ -1.45
RBM39-220ENST00000455343 PRM3Q9NNZ6 103 aa5.98□□□□□ -1.45
RBM39-220ENST00000455343 RAB6BQ9NRW1 208 aa5.98□□□□□ -1.45
RBM39-220ENST00000455343 RNF17Q9BXT8 1623 aaKnown RBP5.98□□□□□ -1.45
RBM39-220ENST00000455343 ARHGAP23Q9P227 1491 aa5.97□□□□□ -1.45
RBM39-220ENST00000455343 MTUS2Q5JR59 1369 aa5.97□□□□□ -1.45
RBM39-220ENST00000455343 WASLO00401 505 aaPredicted RBP5.97□□□□□ -1.45
RBM39-220ENST00000455343 MYCP01106 439 aaPredicted RBP5.97□□□□□ -1.45
RBM39-220ENST00000455343 IL2RAP01589 272 aa5.97□□□□□ -1.45
RBM39-220ENST00000455343 EIF4G2P78344 907 aaKnown RBP eCLIP5.97□□□□□ -1.45
RBM39-220ENST00000455343 WDR44Q5JSH3 913 aa5.97□□□□□ -1.45
RBM39-220ENST00000455343 RIPOR1Q6ZS17 1223 aa5.97□□□□□ -1.45
RBM39-220ENST00000455343 TAS1R3Q7RTX0 852 aa5.97□□□□□ -1.45
RBM39-220ENST00000455343 TXNDC2Q86VQ3 553 aa5.97□□□□□ -1.45
RBM39-220ENST00000455343 ESYT1Q9BSJ8 1104 aa5.97□□□□□ -1.45
RBM39-220ENST00000455343 CEP162Q5TB80 1403 aa5.97□□□□□ -1.45
RBM39-220ENST00000455343 SYNMO15061 1565 aa5.97□□□□□ -1.45
RBM39-220ENST00000455343 POLR1AO95602 1720 aaPredicted RBP5.96□□□□□ -1.45
RBM39-220ENST00000455343 NCOA2Q15596 1464 aa5.96□□□□□ -1.45
RBM39-220ENST00000455343 SCAF11Q99590 1463 aaKnown RBP5.96□□□□□ -1.45
RBM39-220ENST00000455343 STRCP1A6NGW2 1772 aa5.96□□□□□ -1.46
RBM39-220ENST00000455343 IQGAP1P46940 1657 aa5.96□□□□□ -1.46
RBM39-220ENST00000455343 ADGBQ8N7X0 1667 aa5.96□□□□□ -1.46
RBM39-220ENST00000455343 H7C1W4 665 aa5.96□□□□□ -1.46
RBM39-220ENST00000455343 RNF225M0QZC1 329 aaPredicted RBP5.96□□□□□ -1.46
RBM39-220ENST00000455343 GPR25O00155 361 aa5.96□□□□□ -1.46
RBM39-220ENST00000455343 KCNA6P17658 529 aa5.96□□□□□ -1.46
RBM39-220ENST00000455343 DBN1Q16643 649 aa5.96□□□□□ -1.46
RBM39-220ENST00000455343 PHTF2Q8N3S3 785 aa5.96□□□□□ -1.46
RBM39-220ENST00000455343 CNKSR1Q969H4 720 aa5.96□□□□□ -1.46
RBM39-220ENST00000455343 GAS2L1Q99501 681 aaPredicted RBP5.96□□□□□ -1.46
RBM39-220ENST00000455343 HRH3Q9Y5N1 445 aa5.96□□□□□ -1.46
RBM39-220ENST00000455343 ERVK-7P63135 1459 aa5.96□□□□□ -1.46
RBM39-220ENST00000455343 CCDC141Q6ZP82 1450 aa5.96□□□□□ -1.46
RBM39-220ENST00000455343 TMEM94Q12767 1356 aa5.95□□□□□ -1.46
RBM39-220ENST00000455343 SLIT1O75093 1534 aa5.95□□□□□ -1.46
RBM39-220ENST00000455343 TSPY4P0CV99 314 aa5.95□□□□□ -1.46
RBM39-220ENST00000455343 TSPY10P0CW01 314 aa5.95□□□□□ -1.46
RBM39-220ENST00000455343 VAC14Q08AM6 782 aa5.95□□□□□ -1.46
RBM39-220ENST00000455343 LYPD4Q6UWN0 246 aa5.95□□□□□ -1.46
RBM39-220ENST00000455343 GTPBP3Q969Y2 492 aaKnown RBP5.95□□□□□ -1.46
RBM39-220ENST00000455343 XAGE2Q96GT9 111 aa5.95□□□□□ -1.46
RBM39-220ENST00000455343 FHDC1Q9C0D6 1143 aaPredicted RBP5.95□□□□□ -1.46
RBM39-220ENST00000455343 TIMMDC1Q9NPL8 285 aa5.95□□□□□ -1.46
RBM39-220ENST00000455343 MBIPQ9NS73 344 aa5.95□□□□□ -1.46
RBM39-220ENST00000455343 DOLKQ9UPQ8 538 aa5.95□□□□□ -1.46
RBM39-220ENST00000455343 TIAM1Q13009 1591 aa5.94□□□□□ -1.46
RBM39-220ENST00000455343 CELA2BP08218 269 aaPredicted RBP5.94□□□□□ -1.46
RBM39-220ENST00000455343 CENPCQ03188 943 aa5.94□□□□□ -1.46
RBM39-220ENST00000455343 TSGA10IPQ3SY00 556 aa5.94□□□□□ -1.46
RBM39-220ENST00000455343 SLFNL1Q499Z3 407 aa5.94□□□□□ -1.46
RBM39-220ENST00000455343 FOXR1Q6PIV2 292 aa5.94□□□□□ -1.46
RBM39-220ENST00000455343 RNF135Q8IUD6 432 aa5.94□□□□□ -1.46
RBM39-220ENST00000455343 ZSCAN10Q96SZ4 725 aaPredicted RBP5.94□□□□□ -1.46
RBM39-220ENST00000455343 GDPD2Q9HCC8 539 aa5.94□□□□□ -1.46
RBM39-220ENST00000455343 CHIC2Q9UKJ5 165 aa5.94□□□□□ -1.46
RBM39-220ENST00000455343 ZC3H13Q5T200 1668 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms