RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 USPL1Q5W0Q7 1092 aa15.16■□□□□ 0.02
RCL1-208ENST00000448872 NPM2Q86SE8 214 aaKnown RBP15.16■□□□□ 0.02
RCL1-208ENST00000448872 BCL2L12Q9HB09 334 aa15.16■□□□□ 0.02
RCL1-208ENST00000448872 USP42Q9H9J4 1324 aaKnown RBP15.16■□□□□ 0.02
RCL1-208ENST00000448872 A0A087WZG4 1122 aa15.15■□□□□ 0.02
RCL1-208ENST00000448872 FKBP5Q13451 457 aaPredicted RBP15.15■□□□□ 0.02
RCL1-208ENST00000448872 KIF6Q6ZMV9 814 aa15.15■□□□□ 0.02
RCL1-208ENST00000448872 FRAT1Q92837 279 aaPredicted RBP15.15■□□□□ 0.02
RCL1-208ENST00000448872 NARFQ9UHQ1 456 aa15.15■□□□□ 0.02
RCL1-208ENST00000448872 TNNQ9UQP3 1299 aa15.15■□□□□ 0.02
RCL1-208ENST00000448872 TAF1LQ8IZX4 1826 aa15.15■□□□□ 0.02
RCL1-208ENST00000448872 MAP3K15Q6ZN16 1313 aa15.15■□□□□ 0.02
RCL1-208ENST00000448872 MYH14Q7Z406 1995 aaKnown RBP15.15■□□□□ 0.02
RCL1-208ENST00000448872 PI4KAP2A4QPH2 592 aa15.14■□□□□ 0.01
RCL1-208ENST00000448872 F6X3S4 739 aa15.14■□□□□ 0.01
RCL1-208ENST00000448872 ANKRD13DQ6ZTN6 518 aa15.14■□□□□ 0.01
RCL1-208ENST00000448872 PI4KAP1Q8N8J0 262 aa15.14■□□□□ 0.01
RCL1-208ENST00000448872 ADCY9O60503 1353 aa15.14■□□□□ 0.01
RCL1-208ENST00000448872 ZPR1O75312 459 aa15.14■□□□□ 0.01
RCL1-208ENST00000448872 GYS1P13807 737 aa15.14■□□□□ 0.01
RCL1-208ENST00000448872 BRPF1P55201 1214 aaPredicted RBP15.14■□□□□ 0.01
RCL1-208ENST00000448872 FKBP8Q14318 412 aa15.14■□□□□ 0.01
RCL1-208ENST00000448872 MSL1Q68DK7 614 aa15.14■□□□□ 0.01
RCL1-208ENST00000448872 FLAD1Q8NFF5 587 aa15.14■□□□□ 0.01
RCL1-208ENST00000448872 PLIN1O60240 522 aa15.13■□□□□ 0.01
RCL1-208ENST00000448872 RIC3Q7Z5B4 369 aa15.13■□□□□ 0.01
RCL1-208ENST00000448872 PLBD2Q8NHP8 589 aa15.13■□□□□ 0.01
RCL1-208ENST00000448872 MAP3K2Q9Y2U5 619 aa15.13■□□□□ 0.01
RCL1-208ENST00000448872 ZBTB7AO95365 584 aa15.12■□□□□ 0.01
RCL1-208ENST00000448872 KSR2Q6VAB6 950 aa15.12■□□□□ 0.01
RCL1-208ENST00000448872 ERVV-1B6SEH8 477 aa15.11■□□□□ 0.01
RCL1-208ENST00000448872 DDX58O95786 925 aaKnown RBP15.11■□□□□ 0.01
RCL1-208ENST00000448872 TBC1D9BQ66K14 1250 aa15.11■□□□□ 0.01
RCL1-208ENST00000448872 BICDL1Q6ZP65 573 aa15.11■□□□□ 0.01
RCL1-208ENST00000448872 PTPRCP08575 1304 aa15.11■□□□□ 0.01
RCL1-208ENST00000448872 KIF16BQ96L93 1317 aa15.11■□□□□ 0.01
RCL1-208ENST00000448872 ATP5J2-PTCD1G3V325 749 aa15.1■□□□□ 0.01
RCL1-208ENST00000448872 TRIM27P14373 513 aa15.1■□□□□ 0.01
RCL1-208ENST00000448872 GPTP24298 496 aa15.1■□□□□ 0.01
RCL1-208ENST00000448872 GIGYF2Q6Y7W6 1299 aaKnown RBP15.1■□□□□ 0.01
RCL1-208ENST00000448872 MYD88Q99836 296 aa15.1■□□□□ 0.01
RCL1-208ENST00000448872 UBR3Q6ZT12 1888 aa15.09■□□□□ 0.01
RCL1-208ENST00000448872 SLC4A10Q6U841 1118 aa15.09■□□□□ 0.01
RCL1-208ENST00000448872 DNAAF4Q8WXU2 420 aa15.09■□□□□ 0.01
RCL1-208ENST00000448872 CLUAP1Q96AJ1 413 aa15.09■□□□□ 0.01
RCL1-208ENST00000448872 ATF5Q9Y2D1 282 aaPredicted RBP15.09■□□□□ 0.01
RCL1-208ENST00000448872 TCIRG1Q13488 830 aa15.08■□□□□ 0.01
RCL1-208ENST00000448872 NFIXQ14938 502 aa15.08■□□□□ 0.01
RCL1-208ENST00000448872 ZKSCAN2Q63HK3 967 aa15.08■□□□□ 0.01
RCL1-208ENST00000448872 ATF7IPQ6VMQ6 1270 aa15.08■□□□□ 0.01
RCL1-208ENST00000448872 METTL22Q9BUU2 404 aaPredicted RBP15.08■□□□□ 0.01
RCL1-208ENST00000448872 UBN2Q6ZU65 1347 aa15.08■□□□□ 0
RCL1-208ENST00000448872 IGKV5-2P06315 115 aa15.08■□□□□ 0
RCL1-208ENST00000448872 CWF19L2Q2TBE0 894 aaKnown RBP15.08■□□□□ 0
RCL1-208ENST00000448872 CLEC4GQ6UXB4 293 aa15.08■□□□□ 0
RCL1-208ENST00000448872 ARHGAP45Q92619 1136 aa15.08■□□□□ 0
RCL1-208ENST00000448872 API5Q9BZZ5 524 aaKnown RBP15.08■□□□□ 0
RCL1-208ENST00000448872 NIP7Q9Y221 180 aaKnown RBP eCLIP15.08■□□□□ 0
RCL1-208ENST00000448872 ZNF652Q9Y2D9 606 aa15.08■□□□□ 0
RCL1-208ENST00000448872 SUPT16HQ9Y5B9 1047 aaKnown RBP15.08■□□□□ 0
RCL1-208ENST00000448872 TUBGCP6Q96RT7 1819 aa15.07■□□□□ 0
RCL1-208ENST00000448872 FAM177BA6PVY3 158 aa15.07■□□□□ 0
RCL1-208ENST00000448872 IPO8O15397 1037 aaKnown RBP15.07■□□□□ 0
RCL1-208ENST00000448872 RLBP1P12271 317 aa15.07■□□□□ 0
RCL1-208ENST00000448872 DDR1Q08345 913 aa15.07■□□□□ 0
RCL1-208ENST00000448872 BEND3Q5T5X7 828 aa15.07■□□□□ 0
RCL1-208ENST00000448872 C20orf194Q5TEA3 1177 aa15.07■□□□□ 0
RCL1-208ENST00000448872 ZNF34Q8IZ26 560 aa15.07■□□□□ 0
RCL1-208ENST00000448872 NLGN1Q8N2Q7 840 aa15.07■□□□□ 0
RCL1-208ENST00000448872 ISCA1Q9BUE6 129 aa15.07■□□□□ 0
RCL1-208ENST00000448872 MMP10P09238 476 aa15.06■□□□□ 0
RCL1-208ENST00000448872 TM4SF1P30408 202 aa15.06■□□□□ 0
RCL1-208ENST00000448872 RRP1P56182 461 aaKnown RBP15.06■□□□□ 0
RCL1-208ENST00000448872 POTEDQ86YR6 584 aa15.06■□□□□ 0
RCL1-208ENST00000448872 PANK1Q8TE04 598 aa15.06■□□□□ 0
RCL1-208ENST00000448872 C4AP0C0L4 1744 aa15.05■□□□□ 0
RCL1-208ENST00000448872 ATP10DQ9P241 1426 aa15.05■□□□□ -0
RCL1-208ENST00000448872 SUSD4Q5VX71 490 aa15.05■□□□□ -0
RCL1-208ENST00000448872 NLRP10Q86W26 655 aa15.05■□□□□ -0
RCL1-208ENST00000448872 SLC16A10Q8TF71 515 aa15.05■□□□□ -0
RCL1-208ENST00000448872 JARID2Q92833 1246 aaPredicted RBP15.05■□□□□ -0
RCL1-208ENST00000448872 SETDB2Q96T68 719 aa15.05■□□□□ -0
RCL1-208ENST00000448872 MTFR1LQ9H019 292 aa15.05■□□□□ -0
RCL1-208ENST00000448872 ABCC4O15439 1325 aa15.05■□□□□ -0
RCL1-208ENST00000448872 SRCAPQ6ZRS2 3230 aa15.04■□□□□ -0
RCL1-208ENST00000448872 NEURL1BA8MQ27 555 aa15.04■□□□□ -0
RCL1-208ENST00000448872 POLRMTO00411 1230 aaKnown RBP15.04■□□□□ -0
RCL1-208ENST00000448872 RGL2O15211 777 aa15.04■□□□□ -0
RCL1-208ENST00000448872 CENPBP07199 599 aaPredicted RBP15.04■□□□□ -0
RCL1-208ENST00000448872 HSP90AB3PQ58FF7 597 aa15.04■□□□□ -0
RCL1-208ENST00000448872 CCDC24Q8N4L8 307 aa15.04■□□□□ -0
RCL1-208ENST00000448872 SCN7AQ01118 1682 aa15.03■□□□□ -0
RCL1-208ENST00000448872 NEXNQ0ZGT2 675 aa15.03■□□□□ -0
RCL1-208ENST00000448872 DZIP1LQ8IYY4 767 aaKnown RBP15.03■□□□□ -0
RCL1-208ENST00000448872 SYNE4Q8N205 404 aa15.03■□□□□ -0
RCL1-208ENST00000448872 TMEM57Q8N5G2 664 aa15.03■□□□□ -0
RCL1-208ENST00000448872 LINS1Q8NG48 757 aa15.03■□□□□ -0
RCL1-208ENST00000448872 PTGER2P43116 358 aa15.02■□□□□ -0
RCL1-208ENST00000448872 RTL5Q5HYW3 569 aaPredicted RBP15.02■□□□□ -0
RCL1-208ENST00000448872 FTSJ3Q8IY81 847 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms